RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 A930002H24RikQ8C8Y3 163 aa18.31■□□□□ 0.52
Ctdnep1-201ENSMUST00000108593 Trav3-4A0A075B654 114 aa18.3■□□□□ 0.52
Ctdnep1-201ENSMUST00000108593 Hint1P70349 126 aaKnown RBP18.3■□□□□ 0.52
Ctdnep1-201ENSMUST00000108593 Igkv1-122A0A140T8M9 119 aa18.29■□□□□ 0.52
Ctdnep1-201ENSMUST00000108593 Defb47Q30KN1 79 aa18.27■□□□□ 0.51
Ctdnep1-201ENSMUST00000108593 MturnQ8CGA4 131 aa18.27■□□□□ 0.51
Ctdnep1-201ENSMUST00000108593 Odf3bQ5M8M2 238 aa18.25■□□□□ 0.51
Ctdnep1-201ENSMUST00000108593 Igkv8-26A0A075B5N5 123 aa18.24■□□□□ 0.51
Ctdnep1-201ENSMUST00000108593 Defa28D3Z1V9 94 aa18.24■□□□□ 0.51
Ctdnep1-201ENSMUST00000108593 Gm10767Q3TQP0 103 aa18.23■□□□□ 0.51
Ctdnep1-201ENSMUST00000108593 Znf706Q9D115 76 aaKnown RBP18.23■□□□□ 0.51
Ctdnep1-201ENSMUST00000108593 Rpl39lQ9CQD0 51 aa18.23■□□□□ 0.51
Ctdnep1-201ENSMUST00000108593 Igkv3-5A0A140T8M6 119 aa18.22■□□□□ 0.51
Ctdnep1-201ENSMUST00000108593 Tmem243B2RVB9 118 aa18.22■□□□□ 0.51
Ctdnep1-201ENSMUST00000108593 Gm29423A0A087WRM1 55 aa18.2■□□□□ 0.5
Ctdnep1-201ENSMUST00000108593 Defb37Q7TMD2 62 aa18.2■□□□□ 0.5
Ctdnep1-201ENSMUST00000108593 Ube2v1Q9CZY3 147 aa18.2■□□□□ 0.5
Ctdnep1-201ENSMUST00000108593 Igkv1-35A0A0G2JDE5 120 aa18.19■□□□□ 0.5
Ctdnep1-201ENSMUST00000108593 Lce1mQ9CR91 182 aa18.19■□□□□ 0.5
Ctdnep1-201ENSMUST00000108593 Wfdc13Q5DQQ6 81 aa18.18■□□□□ 0.5
Ctdnep1-201ENSMUST00000108593 CenpwQ3URR0 86 aa18.16■□□□□ 0.5
Ctdnep1-201ENSMUST00000108593 Spink13Q3UTS8 97 aa18.16■□□□□ 0.5
Ctdnep1-201ENSMUST00000108593 Anapc11Q9CPX9 84 aa18.15■□□□□ 0.5
Ctdnep1-201ENSMUST00000108593 Gm26602M0QWA4 95 aa18.12■□□□□ 0.49
Ctdnep1-201ENSMUST00000108593 Vpreb3D3Z6J4 130 aa18.1■□□□□ 0.49
Ctdnep1-201ENSMUST00000108593 A0A286YE02 88 aa18.09■□□□□ 0.49
Ctdnep1-201ENSMUST00000108593 HydinQ80W93 5154 aa18.08■□□□□ 0.49
Ctdnep1-201ENSMUST00000108593 D6Ertd527eA0A0N4SWI3 464 aa18.08■□□□□ 0.48
Ctdnep1-201ENSMUST00000108593 Sigmar1O55242 223 aa18.07■□□□□ 0.48
Ctdnep1-201ENSMUST00000108593 Cox6cQ9CPQ1 76 aa18.06■□□□□ 0.48
Ctdnep1-201ENSMUST00000108593 Defb12Q8K4N3 78 aa18.05■□□□□ 0.48
Ctdnep1-201ENSMUST00000108593 Mtatp8P03930 67 aa18.02■□□□□ 0.48
Ctdnep1-201ENSMUST00000108593 Vpreb1P13372 142 aa18.01■□□□□ 0.47
Ctdnep1-201ENSMUST00000108593 NrepQ07475 68 aa18.01■□□□□ 0.47
Ctdnep1-201ENSMUST00000108593 4930524J08RikQ9CUJ5 163 aa18.01■□□□□ 0.47
Ctdnep1-201ENSMUST00000108593 A530084C06RikQ3UTW2 186 aa17.99■□□□□ 0.47
Ctdnep1-201ENSMUST00000108593 Igkv2-109A0A075B5K6 120 aa17.98■□□□□ 0.47
Ctdnep1-201ENSMUST00000108593 Cypt14J3QPF7 87 aa17.98■□□□□ 0.47
Ctdnep1-201ENSMUST00000108593 Defa25Q5G864 92 aa17.95■□□□□ 0.46
Ctdnep1-201ENSMUST00000108593 Mycbp2Q7TPH6 4711 aa17.95■□□□□ 0.46
Ctdnep1-201ENSMUST00000108593 PcloQ9QYX7 5068 aa17.95■□□□□ 0.46
Ctdnep1-201ENSMUST00000108593 Gm10135F6TEE5 83 aa17.94■□□□□ 0.46
Ctdnep1-201ENSMUST00000108593 Lamtor3O88653 124 aa17.94■□□□□ 0.46
Ctdnep1-201ENSMUST00000108593 Bud31Q6PGH1 103 aa17.93■□□□□ 0.46
Ctdnep1-201ENSMUST00000108593 Gm10401E9Q3K6 71 aa17.92■□□□□ 0.46
Ctdnep1-201ENSMUST00000108593 Gm26920S4R2A5 56 aa17.91■□□□□ 0.46
Ctdnep1-201ENSMUST00000108593 Gm37389A0A0A6YW05 95 aa17.9■□□□□ 0.46
Ctdnep1-201ENSMUST00000108593 A830005F24RikQ8BRT5 167 aa17.9■□□□□ 0.46
Ctdnep1-201ENSMUST00000108593 9530003J23RikQ8BM26 151 aa17.87■□□□□ 0.45
Ctdnep1-201ENSMUST00000108593 Acyp1P56376 99 aa17.85■□□□□ 0.45
Ctdnep1-201ENSMUST00000108593 Igkv3-10A0A0G2JGN0 119 aa17.84■□□□□ 0.45
Ctdnep1-201ENSMUST00000108593 1700020N15RikL7MTX3 112 aa17.82■□□□□ 0.44
Ctdnep1-201ENSMUST00000108593 P06320 134 aa17.79■□□□□ 0.44
Ctdnep1-201ENSMUST00000108593 Sfta2E9PXB6 77 aa17.73■□□□□ 0.43
Ctdnep1-201ENSMUST00000108593 Q8BT88 171 aa17.72■□□□□ 0.43
Ctdnep1-201ENSMUST00000108593 Vps25Q9CQ80 176 aa17.72■□□□□ 0.43
Ctdnep1-201ENSMUST00000108593 Gm17689B3GLJ4 109 aa17.7■□□□□ 0.42
Ctdnep1-201ENSMUST00000108593 Cox6a2P43023 97 aa17.7■□□□□ 0.42
Ctdnep1-201ENSMUST00000108593 Gm9736A0A1W2P7N1 277 aa17.69■□□□□ 0.42
Ctdnep1-201ENSMUST00000108593 Gm28230A0A0A0MQ91 144 aa17.68■□□□□ 0.42
Ctdnep1-201ENSMUST00000108593 Ifitm6A0A1B0GS75 124 aa17.68■□□□□ 0.42
Ctdnep1-201ENSMUST00000108593 Chchd10Q7TNL9 138 aa17.68■□□□□ 0.42
Ctdnep1-201ENSMUST00000108593 Gm7102J3QQ10 178 aa17.65■□□□□ 0.42
Ctdnep1-201ENSMUST00000108593 Spaca4Q80ZQ0 127 aa17.64■□□□□ 0.41
Ctdnep1-201ENSMUST00000108593 1700018G05RikA0A1B0GSI2 66 aa17.62■□□□□ 0.41
Ctdnep1-201ENSMUST00000108593 Gm12353A2AGJ4 60 aa17.59■□□□□ 0.41
Ctdnep1-201ENSMUST00000108593 Dph3Q8K0W9 82 aa17.59■□□□□ 0.41
Ctdnep1-201ENSMUST00000108593 Pxt1Q8K459 51 aa17.59■□□□□ 0.41
Ctdnep1-201ENSMUST00000108593 Ighv10-3A0A075B5T6 119 aa17.58■□□□□ 0.4
Ctdnep1-201ENSMUST00000108593 Lrp2A2ARV4 4660 aa17.56■□□□□ 0.4
Ctdnep1-201ENSMUST00000108593 Gm18596A0A1W2P860 280 aa17.54■□□□□ 0.4
Ctdnep1-201ENSMUST00000108593 Igkv8-27A0A0G2JF28 120 aa17.51■□□□□ 0.39
Ctdnep1-201ENSMUST00000108593 Igkv8-30A0A140T8M3 121 aa17.51■□□□□ 0.39
Ctdnep1-201ENSMUST00000108593 Igkv3-4A0A140T8Q4 119 aa17.5■□□□□ 0.39
Ctdnep1-201ENSMUST00000108593 Herc1E9PZP8 4859 aa17.5■□□□□ 0.39
Ctdnep1-201ENSMUST00000108593 Gm21886J3QJU9 214 aa17.48■□□□□ 0.39
Ctdnep1-201ENSMUST00000108593 A730071L15RikQ8C4X0 137 aa17.48■□□□□ 0.39
Ctdnep1-201ENSMUST00000108593 Rps29P62274 56 aa17.47■□□□□ 0.39
Ctdnep1-201ENSMUST00000108593 Gm16253D3Z167 63 aa17.46■□□□□ 0.39
Ctdnep1-201ENSMUST00000108593 Igkv8-28A0A0G2JE47 121 aa17.45■□□□□ 0.38
Ctdnep1-201ENSMUST00000108593 Gm10308Q9CVR5 141 aa17.45■□□□□ 0.38
Ctdnep1-201ENSMUST00000108593 Sprr2jO70561 109 aa17.43■□□□□ 0.38
Ctdnep1-201ENSMUST00000108593 Rbm3O89086 153 aaKnown RBP17.43■□□□□ 0.38
Ctdnep1-201ENSMUST00000108593 4930535I16RikQ9CUI2 172 aa17.39■□□□□ 0.37
Ctdnep1-201ENSMUST00000108593 Gtf2h5Q8K2X8 71 aa17.35■□□□□ 0.37
Ctdnep1-201ENSMUST00000108593 Gm2310J3QNJ2 377 aa17.34■□□□□ 0.37
Ctdnep1-201ENSMUST00000108593 Pde6gP09174 87 aa17.33■□□□□ 0.37
Ctdnep1-201ENSMUST00000108593 Cby1Q9D1C2 127 aa17.32■□□□□ 0.36
Ctdnep1-201ENSMUST00000108593 GhrhP16043 103 aa17.3■□□□□ 0.36
Ctdnep1-201ENSMUST00000108593 Gm45213A0A0U1RNZ6 101 aa17.29■□□□□ 0.36
Ctdnep1-201ENSMUST00000108593 Trav14d-3-dv8A0A075B619 120 aa17.22■□□□□ 0.35
Ctdnep1-201ENSMUST00000108593 Igkv8-21A0A140T8P7 120 aa17.22■□□□□ 0.35
Ctdnep1-201ENSMUST00000108593 A930033H14RikG5E8X6 103 aa17.22■□□□□ 0.35
Ctdnep1-201ENSMUST00000108593 Fam240bJ3QMB3 78 aa17.22■□□□□ 0.35
Ctdnep1-201ENSMUST00000108593 Xcl1P47993 114 aa17.21■□□□□ 0.35
Ctdnep1-201ENSMUST00000108593 Gm44790A0A0N4SV91 103 aa17.18■□□□□ 0.34
Ctdnep1-201ENSMUST00000108593 Gm5965D3Z724 196 aa17.15■□□□□ 0.34
Ctdnep1-201ENSMUST00000108593 Tmem213Q08EA8 116 aa17.15■□□□□ 0.34
Ctdnep1-201ENSMUST00000108593 Cystm1Q8K353 104 aa17.14■□□□□ 0.33
Ctdnep1-201ENSMUST00000108593 Gm20604F8WIA3 75 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 89.2 ms