RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Itpr1P11881 2749 aa4.27□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Chd6A3KFM7 2711 aa4.26□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Ndufaf8A2AMZ4 74 aa4.26□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Stab1Q8R4Y4 2571 aa4.26□□□□□ -1.73
Scn3a-202ENSMUST00000100069 HrnrQ8VHD8 2496 aa4.26□□□□□ -1.73
Scn3a-202ENSMUST00000100069 FlnaQ8BTM8 2647 aaKnown RBP4.26□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Gm42715A0A087WP63 3095 aaKnown RBP4.26□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Gm37013Q8K491 104 aa4.25□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Romo1P60603 79 aa4.25□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Nsd1O88491 2588 aaKnown RBP4.25□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Gm16253D3Z167 63 aa4.24□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Rpl37Q9D823 97 aa4.24□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Gm9195A0A140LHT4 2805 aa4.24□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Itpr3P70227 2670 aa4.23□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Sprr1aQ62266 144 aa4.22□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Hectd1Q69ZR2 2618 aaKnown RBP4.22□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Gm9112A2AI92 75 aa4.21□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Jbts17Q8CE72 3214 aa4.21□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Gm3250E9Q1M3 230 aa4.21□□□□□ -1.74
Scn3a-202ENSMUST00000100069 Ep400Q8CHI8 3072 aaKnown RBP4.21□□□□□ -1.74
Scn3a-202ENSMUST00000100069 BC029722A0A0N4SW31 51 aa4.19□□□□□ -1.74
Scn3a-202ENSMUST00000100069 Cep350E9Q309 3095 aa4.19□□□□□ -1.74
Scn3a-202ENSMUST00000100069 Krtap15-1Q9QZU5 150 aa4.19□□□□□ -1.74
Scn3a-202ENSMUST00000100069 Cystm1Q8K353 104 aa4.19□□□□□ -1.74
Scn3a-202ENSMUST00000100069 UtrnE9Q6R7 3430 aa4.18□□□□□ -1.74
Scn3a-202ENSMUST00000100069 Gm5767A0A0J9YTU8 78 aa4.18□□□□□ -1.74
Scn3a-202ENSMUST00000100069 Cox6b2Q80ZN9 88 aa4.16□□□□□ -1.74
Scn3a-202ENSMUST00000100069 Krtap29-1A2A5X4 342 aa4.16□□□□□ -1.74
Scn3a-202ENSMUST00000100069 Igsf10Q3V1M1 2594 aa4.16□□□□□ -1.74
Scn3a-202ENSMUST00000100069 Rps29P62274 56 aa4.16□□□□□ -1.74
Scn3a-202ENSMUST00000100069 A030003K21RikA0A1Y7VIM3 128 aa4.15□□□□□ -1.75
Scn3a-202ENSMUST00000100069 Gm19426M0QWC7 77 aa4.15□□□□□ -1.75
Scn3a-202ENSMUST00000100069 Gm10382Q3V0T5 144 aa4.14□□□□□ -1.75
Scn3a-202ENSMUST00000100069 Tep1P97499 2629 aa4.12□□□□□ -1.75
Scn3a-202ENSMUST00000100069 A730071L15RikQ8C4X0 137 aa4.1□□□□□ -1.75
Scn3a-202ENSMUST00000100069 Tnrc18Q80WC3 2878 aa4.08□□□□□ -1.76
Scn3a-202ENSMUST00000100069 Prm2P07978 107 aa4.07□□□□□ -1.76
Scn3a-202ENSMUST00000100069 Prune2Q52KR3 3084 aa4.07□□□□□ -1.76
Scn3a-202ENSMUST00000100069 Lama2Q60675 3118 aaKnown RBP4.06□□□□□ -1.76
Scn3a-202ENSMUST00000100069 Bod1lE9Q6J5 3032 aa4.05□□□□□ -1.76
Scn3a-202ENSMUST00000100069 NipblQ6KCD5 2798 aaKnown RBP4.05□□□□□ -1.76
Scn3a-202ENSMUST00000100069 Stab2Q8R4U0 2559 aa4.04□□□□□ -1.76
Scn3a-202ENSMUST00000100069 Ranbp2Q9ERU9 3053 aaKnown RBP4.03□□□□□ -1.76
Scn3a-202ENSMUST00000100069 Pkd1l1Q8R526 2615 aa4.02□□□□□ -1.77
Scn3a-202ENSMUST00000100069 9530053A07RikE9PVG8 2581 aa4.02□□□□□ -1.77
Scn3a-202ENSMUST00000100069 TrioQ0KL02 3102 aa4.01□□□□□ -1.77
Scn3a-202ENSMUST00000100069 Gm40193A0A1B0GT39 78 aa4.01□□□□□ -1.77
Scn3a-202ENSMUST00000100069 Gm3233E9Q2H5 230 aa4.01□□□□□ -1.77
Scn3a-202ENSMUST00000100069 Gm17349F7BGH6 99 aa4.01□□□□□ -1.77
Scn3a-202ENSMUST00000100069 2310050C09RikG5E8Z3 280 aa4.01□□□□□ -1.77
Scn3a-202ENSMUST00000100069 Gm2310J3QNJ2 377 aa4.01□□□□□ -1.77
Scn3a-202ENSMUST00000100069 Lama3Q61789 3330 aa4□□□□□ -1.77
Scn3a-202ENSMUST00000100069 Myo15bI7HPW8 3033 aa3.97□□□□□ -1.77
Scn3a-202ENSMUST00000100069 Ash1lQ99MY8 2958 aa3.97□□□□□ -1.77
Scn3a-202ENSMUST00000100069 Dmxl1Q6PNC0 3013 aa3.97□□□□□ -1.77
Scn3a-202ENSMUST00000100069 Itpr2Q9Z329 2701 aa3.97□□□□□ -1.77
Scn3a-202ENSMUST00000100069 Muc2Q80Z19 2680 aa3.96□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Gm7138L7N2C3 230 aa3.96□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Gm3238W4VSP7 230 aa3.96□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Chd7A2AJK6 2986 aaKnown RBP3.95□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Hivep1Q03172 2688 aa3.95□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Mki67E9PVX6 3177 aaKnown RBP3.94□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Usp34Q6ZQ93 3582 aa3.94□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Tnp1P10856 55 aa3.92□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Cfap54Q8C6S9 3106 aa3.91□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Lelp1Q9DAE3 120 aa3.91□□□□□ -1.78
Scn3a-202ENSMUST00000100069 FlncQ8VHX6 2726 aaKnown RBP3.91□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Krtap13O88375 197 aa3.91□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Tnp2P11378 117 aa3.91□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Nbeal2Q6ZQA0 2742 aa3.9□□□□□ -1.78
Scn3a-202ENSMUST00000100069 Vps13aQ5H8C4 3166 aa3.9□□□□□ -1.78
Scn3a-202ENSMUST00000100069 2310057N15RikQ9D6T8 200 aa3.9□□□□□ -1.79
Scn3a-202ENSMUST00000100069 Gm6217A0A1Y7VJK9 128 aa3.89□□□□□ -1.79
Scn3a-202ENSMUST00000100069 Fbn2Q61555 2907 aa3.88□□□□□ -1.79
Scn3a-202ENSMUST00000100069 Krtap14O08640 167 aa3.88□□□□□ -1.79
Scn3a-202ENSMUST00000100069 Gm7137J3QMW1 236 aa3.87□□□□□ -1.79
Scn3a-202ENSMUST00000100069 ApcQ61315 2845 aa3.87□□□□□ -1.79
Scn3a-202ENSMUST00000100069 KalrnA2CG49 2964 aa3.87□□□□□ -1.79
Scn3a-202ENSMUST00000100069 Col12a1Q60847 3120 aa3.87□□□□□ -1.79
Scn3a-202ENSMUST00000100069 BptfA2A654 3036 aaKnown RBP3.87□□□□□ -1.79
Scn3a-202ENSMUST00000100069 D6Ertd527eA0A0N4SWI3 464 aa3.86□□□□□ -1.79
Scn3a-202ENSMUST00000100069 DspE9Q557 2883 aaKnown RBP3.85□□□□□ -1.79
Scn3a-202ENSMUST00000100069 Rev3lQ61493 3122 aa3.85□□□□□ -1.79
Scn3a-202ENSMUST00000100069 Gm9508A0A1W2P7W0 230 aa3.85□□□□□ -1.79
Scn3a-202ENSMUST00000100069 MgaA2AWL7 3003 aaKnown RBP3.84□□□□□ -1.8
Scn3a-202ENSMUST00000100069 Utp20Q5XG71 2788 aaKnown RBP3.84□□□□□ -1.8
Scn3a-202ENSMUST00000100069 Cdh23Q99PF4 3354 aa3.83□□□□□ -1.8
Scn3a-202ENSMUST00000100069 Gm7173A0A0G2JEB6 3132 aa3.83□□□□□ -1.8
Scn3a-202ENSMUST00000100069 Gm5965D3Z724 196 aa3.83□□□□□ -1.8
Scn3a-202ENSMUST00000100069 Ubr5Q80TP3 2792 aa3.82□□□□□ -1.8
Scn3a-202ENSMUST00000100069 2310061N02RikQ9D6S9 174 aa3.82□□□□□ -1.8
Scn3a-202ENSMUST00000100069 Gm36176A0A1W2P8D5 158 aa3.81□□□□□ -1.8
Scn3a-202ENSMUST00000100069 Unc80Q8BLN6 3261 aa3.79□□□□□ -1.8
Scn3a-202ENSMUST00000100069 Tex15F8VPN2 2785 aa3.78□□□□□ -1.8
Scn3a-202ENSMUST00000100069 Frem2Q6NVD0 3160 aa3.78□□□□□ -1.8
Scn3a-202ENSMUST00000100069 AtmQ62388 3066 aa3.78□□□□□ -1.8
Scn3a-202ENSMUST00000100069 Celsr3Q91ZI0 3301 aa3.77□□□□□ -1.81
Scn3a-202ENSMUST00000100069 FrylF8VQ05 3007 aa3.76□□□□□ -1.81
Scn3a-202ENSMUST00000100069 Zfhx3Q61329 3726 aa3.75□□□□□ -1.81
Scn3a-202ENSMUST00000100069 FryE9Q8I9 3020 aa3.75□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms