RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Zcchc13Q9D548 170 aa6.62□□□□□ -1.35
Lig4-201ENSMUST00000095476 Defb10Q8R2I8 73 aa6.6□□□□□ -1.35
Lig4-201ENSMUST00000095476 Ankrd17Q99NH0 2603 aaKnown RBP6.6□□□□□ -1.35
Lig4-201ENSMUST00000095476 Mast4Q811L6 2618 aa6.6□□□□□ -1.35
Lig4-201ENSMUST00000095476 A730071L15RikQ8C4X0 137 aa6.59□□□□□ -1.35
Lig4-201ENSMUST00000095476 Map1aQ9QYR6 2776 aa6.59□□□□□ -1.36
Lig4-201ENSMUST00000095476 Spaca4Q80ZQ0 127 aa6.58□□□□□ -1.36
Lig4-201ENSMUST00000095476 Dchs2A0A0A6YW72 3346 aa6.58□□□□□ -1.36
Lig4-201ENSMUST00000095476 Fam104aA2A6P4 185 aa6.57□□□□□ -1.36
Lig4-201ENSMUST00000095476 Gpr15lA0A0B4J1N3 78 aa6.57□□□□□ -1.36
Lig4-201ENSMUST00000095476 DspE9Q557 2883 aaKnown RBP6.56□□□□□ -1.36
Lig4-201ENSMUST00000095476 NbeaQ9EPN1 2936 aa6.56□□□□□ -1.36
Lig4-201ENSMUST00000095476 Dmxl2Q8BPN8 3032 aa6.55□□□□□ -1.36
Lig4-201ENSMUST00000095476 Gm21798J3QNU5 87 aa6.55□□□□□ -1.36
Lig4-201ENSMUST00000095476 Gm9821Q8K076 103 aa6.55□□□□□ -1.36
Lig4-201ENSMUST00000095476 FlnaQ8BTM8 2647 aaKnown RBP6.54□□□□□ -1.36
Lig4-201ENSMUST00000095476 Gm3250E9Q1M3 230 aa6.54□□□□□ -1.36
Lig4-201ENSMUST00000095476 RetnlbQ99P86 105 aa6.53□□□□□ -1.36
Lig4-201ENSMUST00000095476 Spata3Q9D9T6 193 aa6.53□□□□□ -1.36
Lig4-201ENSMUST00000095476 Wdfy3Q6VNB8 3508 aa6.51□□□□□ -1.37
Lig4-201ENSMUST00000095476 Nsd1O88491 2588 aaKnown RBP6.5□□□□□ -1.37
Lig4-201ENSMUST00000095476 2310034C09RikQ9D746 214 aa6.5□□□□□ -1.37
Lig4-201ENSMUST00000095476 Rnase13Q5GAM7 153 aa6.5□□□□□ -1.37
Lig4-201ENSMUST00000095476 Usp9yF8VPU6 2556 aa6.49□□□□□ -1.37
Lig4-201ENSMUST00000095476 Ly6g6cQ9Z1Q4 126 aa6.49□□□□□ -1.37
Lig4-201ENSMUST00000095476 Igsf10Q3V1M1 2594 aa6.47□□□□□ -1.37
Lig4-201ENSMUST00000095476 Gcn1E9PVA8 2671 aaKnown RBP6.47□□□□□ -1.37
Lig4-201ENSMUST00000095476 Ranbp2Q9ERU9 3053 aaKnown RBP6.47□□□□□ -1.37
Lig4-201ENSMUST00000095476 6030445D17RikE9Q8F9 148 aa6.46□□□□□ -1.37
Lig4-201ENSMUST00000095476 Gm37013Q8K491 104 aa6.46□□□□□ -1.37
Lig4-201ENSMUST00000095476 FasnP19096 2504 aaKnown RBP6.46□□□□□ -1.38
Lig4-201ENSMUST00000095476 Gm3880A0A1B0GSB3 72 aa6.46□□□□□ -1.38
Lig4-201ENSMUST00000095476 Defb9Q8R2I6 67 aa6.45□□□□□ -1.38
Lig4-201ENSMUST00000095476 Prrc2cQ3TLH4 2846 aaKnown RBP6.45□□□□□ -1.38
Lig4-201ENSMUST00000095476 Cypt14J3QPF7 87 aa6.45□□□□□ -1.38
Lig4-201ENSMUST00000095476 Pla2g10Q9QXX3 151 aa6.44□□□□□ -1.38
Lig4-201ENSMUST00000095476 Ash1lQ99MY8 2958 aa6.43□□□□□ -1.38
Lig4-201ENSMUST00000095476 DmdP11531 3678 aa6.43□□□□□ -1.38
Lig4-201ENSMUST00000095476 Anapc11Q9CPX9 84 aa6.4□□□□□ -1.38
Lig4-201ENSMUST00000095476 Gm20538F6Z9R1 75 aa6.39□□□□□ -1.39
Lig4-201ENSMUST00000095476 CriptO70333 101 aa6.39□□□□□ -1.39
Lig4-201ENSMUST00000095476 Stab1Q8R4Y4 2571 aa6.39□□□□□ -1.39
Lig4-201ENSMUST00000095476 9530053A07RikE9PVG8 2581 aa6.38□□□□□ -1.39
Lig4-201ENSMUST00000095476 Chd6A3KFM7 2711 aa6.38□□□□□ -1.39
Lig4-201ENSMUST00000095476 Zzef1Q5SSH7 2924 aa6.37□□□□□ -1.39
Lig4-201ENSMUST00000095476 Gm10139O88245 57 aa6.36□□□□□ -1.39
Lig4-201ENSMUST00000095476 HrnrQ8VHD8 2496 aa6.36□□□□□ -1.39
Lig4-201ENSMUST00000095476 Ubr5Q80TP3 2792 aa6.35□□□□□ -1.39
Lig4-201ENSMUST00000095476 Celsr1O35161 3034 aa6.35□□□□□ -1.39
Lig4-201ENSMUST00000095476 Dchs1E9PVD3 3291 aa6.35□□□□□ -1.39
Lig4-201ENSMUST00000095476 Col6a5A6H584 2640 aa6.34□□□□□ -1.39
Lig4-201ENSMUST00000095476 Odf3bQ5M8M2 238 aa6.34□□□□□ -1.39
Lig4-201ENSMUST00000095476 Gm9955Q8CEJ8 102 aa6.34□□□□□ -1.39
Lig4-201ENSMUST00000095476 AW011738F6S7Q2 159 aa6.34□□□□□ -1.39
Lig4-201ENSMUST00000095476 Igfn1Q3KNY0 2849 aa6.32□□□□□ -1.4
Lig4-201ENSMUST00000095476 Gm3233E9Q2H5 230 aa6.32□□□□□ -1.4
Lig4-201ENSMUST00000095476 Hivep1Q03172 2688 aa6.31□□□□□ -1.4
Lig4-201ENSMUST00000095476 Myo15aQ9QZZ4 3511 aa6.3□□□□□ -1.4
Lig4-201ENSMUST00000095476 Celsr3Q91ZI0 3301 aa6.3□□□□□ -1.4
Lig4-201ENSMUST00000095476 Gm9195A0A140LHT4 2805 aa6.3□□□□□ -1.4
Lig4-201ENSMUST00000095476 Sprr1aQ62266 144 aa6.3□□□□□ -1.4
Lig4-201ENSMUST00000095476 Lelp1Q9DAE3 120 aa6.29□□□□□ -1.4
Lig4-201ENSMUST00000095476 Tenm4Q3UHK6 2771 aa6.28□□□□□ -1.4
Lig4-201ENSMUST00000095476 Fn1P11276 2477 aaKnown RBP6.27□□□□□ -1.41
Lig4-201ENSMUST00000095476 Plac8Q9JI48 112 aa6.26□□□□□ -1.41
Lig4-201ENSMUST00000095476 FlncQ8VHX6 2726 aaKnown RBP6.26□□□□□ -1.41
Lig4-201ENSMUST00000095476 Adgrg4B7ZCC9 3073 aa6.25□□□□□ -1.41
Lig4-201ENSMUST00000095476 Defb11Q8R2I7 77 aa6.24□□□□□ -1.41
Lig4-201ENSMUST00000095476 Utp20Q5XG71 2788 aaKnown RBP6.23□□□□□ -1.41
Lig4-201ENSMUST00000095476 Gm11565A2A4M7 156 aa6.23□□□□□ -1.41
Lig4-201ENSMUST00000095476 RelnQ60841 3461 aa6.23□□□□□ -1.41
Lig4-201ENSMUST00000095476 Nbeal2Q6ZQA0 2742 aa6.23□□□□□ -1.41
Lig4-201ENSMUST00000095476 NbdyA0A0N4SUI7 68 aa6.23□□□□□ -1.41
Lig4-201ENSMUST00000095476 Gm16253D3Z167 63 aa6.22□□□□□ -1.41
Lig4-201ENSMUST00000095476 Gm10065F6TJM2 114 aa6.22□□□□□ -1.41
Lig4-201ENSMUST00000095476 Gm4491E0CX42 125 aa6.21□□□□□ -1.41
Lig4-201ENSMUST00000095476 Gm2310J3QNJ2 377 aa6.19□□□□□ -1.42
Lig4-201ENSMUST00000095476 Romo1P60603 79 aa6.16□□□□□ -1.42
Lig4-201ENSMUST00000095476 Zfhx4Q9JJN2 3550 aa6.16□□□□□ -1.42
Lig4-201ENSMUST00000095476 Notch1Q01705 2531 aa6.13□□□□□ -1.43
Lig4-201ENSMUST00000095476 Itpr2Q9Z329 2701 aa6.13□□□□□ -1.43
Lig4-201ENSMUST00000095476 Trank1Q8BV79 2999 aa6.12□□□□□ -1.43
Lig4-201ENSMUST00000095476 Pkd1l1Q8R526 2615 aa6.11□□□□□ -1.43
Lig4-201ENSMUST00000095476 Rpl37Q9D823 97 aa6.1□□□□□ -1.43
Lig4-201ENSMUST00000095476 LrbaQ9ESE1 2856 aa6.1□□□□□ -1.43
Lig4-201ENSMUST00000095476 NipblQ6KCD5 2798 aaKnown RBP6.1□□□□□ -1.43
Lig4-201ENSMUST00000095476 Gm7137J3QMW1 236 aa6.1□□□□□ -1.43
Lig4-201ENSMUST00000095476 FcgbpE9Q0B5 2583 aa6.1□□□□□ -1.43
Lig4-201ENSMUST00000095476 Akap9Q70FJ1 3797 aa6.09□□□□□ -1.43
Lig4-201ENSMUST00000095476 Muc5acE9QAQ8 3455 aa6.06□□□□□ -1.44
Lig4-201ENSMUST00000095476 Gm10382Q3V0T5 144 aa6.05□□□□□ -1.44
Lig4-201ENSMUST00000095476 Celsr2Q9R0M0 2920 aa6.05□□□□□ -1.44
Lig4-201ENSMUST00000095476 Gm7138L7N2C3 230 aa6.03□□□□□ -1.44
Lig4-201ENSMUST00000095476 Gm3238W4VSP7 230 aa6.03□□□□□ -1.44
Lig4-201ENSMUST00000095476 Tex15F8VPN2 2785 aa6.01□□□□□ -1.45
Lig4-201ENSMUST00000095476 Gm36176A0A1W2P8D5 158 aa6□□□□□ -1.45
Lig4-201ENSMUST00000095476 OxtP35454 125 aa6□□□□□ -1.45
Lig4-201ENSMUST00000095476 Helz2E9QAM5 2947 aaKnown RBP6□□□□□ -1.45
Lig4-201ENSMUST00000095476 Gm9508A0A1W2P7W0 230 aa6□□□□□ -1.45
Lig4-201ENSMUST00000095476 Vps13cQ8BX70 3748 aa5.99□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms