RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Gm11939A2A592 99 aa5.94□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Sprr1aQ62266 144 aa5.94□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 D730001G18RikA0A087WQU7 115 aa5.93□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Gm3285A0A1W2P7U0 201 aa5.93□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Nav3Q80TN7 2359 aa5.92□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Defb9Q8R2I6 67 aa5.92□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 NbasE9Q411 2356 aa5.91□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Mapk1ip1lQ8BH93 242 aa5.9□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 OtogO55225 2910 aa5.9□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 CubnQ9JLB4 3623 aa5.89□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 AW011738F6S7Q2 159 aa5.89□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 Sec16aA2AIX1 2377 aa5.89□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 Tenm2Q9WTS5 2764 aa5.88□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 Prm2P07978 107 aa5.88□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 Abca2P41234 2434 aa5.88□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 Zfyve26Q5DU37 2529 aa5.88□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 Gm4707V9GXN5 68 aa5.87□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 Lce6aD3YV94 81 aa5.86□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 Nf1Q04690 2841 aa5.84□□□□□ -1.47
Hmgb1-201ENSMUST00000085546 Csmd3Q80T79 3707 aa5.83□□□□□ -1.48
Hmgb1-201ENSMUST00000085546 Defb18Q30KP5 85 aa5.82□□□□□ -1.48
Hmgb1-201ENSMUST00000085546 Myo9aQ8C170 2542 aa5.82□□□□□ -1.48
Hmgb1-201ENSMUST00000085546 BsnO88737 3942 aa5.81□□□□□ -1.48
Hmgb1-201ENSMUST00000085546 Setd2E9Q5F9 2537 aa5.8□□□□□ -1.48
Hmgb1-201ENSMUST00000085546 A0A1Y7VJH8 109 aa5.79□□□□□ -1.48
Hmgb1-201ENSMUST00000085546 Usp9xP70398 2559 aaKnown RBP5.79□□□□□ -1.48
Hmgb1-201ENSMUST00000085546 Hspg2Q05793 3707 aaKnown RBP5.78□□□□□ -1.48
Hmgb1-201ENSMUST00000085546 BC067074F6RXI4 2391 aa5.77□□□□□ -1.49
Hmgb1-201ENSMUST00000085546 Wfdc10Q3V2J9 124 aa5.77□□□□□ -1.49
Hmgb1-201ENSMUST00000085546 Gm27235Q3UW50 83 aa5.77□□□□□ -1.49
Hmgb1-201ENSMUST00000085546 Itpr3P70227 2670 aa5.77□□□□□ -1.49
Hmgb1-201ENSMUST00000085546 Utp20Q5XG71 2788 aaKnown RBP5.74□□□□□ -1.49
Hmgb1-201ENSMUST00000085546 Krtap14O08640 167 aa5.74□□□□□ -1.49
Hmgb1-201ENSMUST00000085546 SycnQ8VCK7 134 aa5.72□□□□□ -1.49
Hmgb1-201ENSMUST00000085546 Ank2Q8C8R3 3898 aa5.72□□□□□ -1.49
Hmgb1-201ENSMUST00000085546 AplnQ9R0R4 77 aa5.7□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 NipblQ6KCD5 2798 aaKnown RBP5.69□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 Ncor2Q9WU42 2472 aaKnown RBP5.68□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 Gm10999F6Q4M4 69 aa5.68□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 2310079G19RikQ9D6L6 185 aa5.67□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 Brwd1Q921C3 2304 aa5.67□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 Zfp462B1AWL2 2495 aaKnown RBP5.67□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 Gm16253D3Z167 63 aa5.67□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 Nbeal1E9PYP2 2688 aa5.67□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 Sptbn4E9PX29 2561 aa5.67□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 Kmt2bO08550 2713 aa5.66□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 Q8K1L6 76 aa5.66□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 Defb13Q8R2I4 64 aa5.65□□□□□ -1.5
Hmgb1-201ENSMUST00000085546 MtorQ9JLN9 2549 aa5.65□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 ApcQ61315 2845 aa5.65□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Gm3880A0A1B0GSB3 72 aa5.65□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Gm20537G3UYK7 97 aa5.64□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 FlncQ8VHX6 2726 aaKnown RBP5.64□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Krtap24-1G3X9A2 248 aa5.64□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Sslp1Q3UN54 99 aa5.64□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Tex15F8VPN2 2785 aa5.63□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Defb1P56386 69 aa5.63□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Dnah1E9Q8T7 4250 aa5.61□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Pdzd2E9Q1M1 2796 aa5.61□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Dnah11E9Q7N9 4488 aa5.61□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Pkd1l2Q7TN88 2461 aa5.61□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Megf8P60882 2789 aa5.61□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Krtap28-10A0A1Y7VP58 119 aa5.6□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 HrnrQ8VHD8 2496 aa5.6□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Chd8Q09XV5 2582 aaKnown RBP5.6□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Epg5Q80TA9 2572 aa5.6□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Anapc11Q9CPX9 84 aa5.6□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Dnah3Q8BW94 4083 aa5.6□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Tep1P97499 2629 aa5.59□□□□□ -1.51
Hmgb1-201ENSMUST00000085546 Ptpn13Q64512 2453 aa5.58□□□□□ -1.52
Hmgb1-201ENSMUST00000085546 Kmt2aP55200 3966 aa5.56□□□□□ -1.52
Hmgb1-201ENSMUST00000085546 Ndufaf8A2AMZ4 74 aa5.56□□□□□ -1.52
Hmgb1-201ENSMUST00000085546 AcacbE9Q4Z2 2448 aa5.55□□□□□ -1.52
Hmgb1-201ENSMUST00000085546 CriptO70333 101 aa5.53□□□□□ -1.52
Hmgb1-201ENSMUST00000085546 Tenm3Q9WTS6 2715 aa5.53□□□□□ -1.52
Hmgb1-201ENSMUST00000085546 Ankrd11E9Q4F7 2643 aa5.52□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 Nupr2Q497P3 102 aa5.52□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 4930507D05RikQ8C9C9 103 aa5.52□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 Nbeal2Q6ZQA0 2742 aa5.5□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 Gm10642Q3TWM1 71 aa5.5□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 D6Ertd527eA0A0N4SWI3 464 aa5.49□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 Gm10065F6TJM2 114 aa5.49□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 Fbn1Q61554 2873 aaKnown RBP5.49□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 A930033H14RikG5E8X6 103 aa5.49□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 PolqQ8CGS6 2544 aa5.49□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 Srrm2Q8BTI8 2703 aaKnown RBP5.49□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 Dnah7bL7N1Y0 4068 aa5.48□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 Abca12E9Q876 2595 aa5.48□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 Gm21887J3QQ04 176 aa5.47□□□□□ -1.53
Hmgb1-201ENSMUST00000085546 Krtap13O88375 197 aa5.44□□□□□ -1.54
Hmgb1-201ENSMUST00000085546 PtprqP0C5E4 2300 aa5.43□□□□□ -1.54
Hmgb1-201ENSMUST00000085546 Bahcc1Q3UHR0 2643 aa5.43□□□□□ -1.54
Hmgb1-201ENSMUST00000085546 FlnaQ8BTM8 2647 aaKnown RBP5.42□□□□□ -1.54
Hmgb1-201ENSMUST00000085546 Notch2O35516 2470 aa5.42□□□□□ -1.54
Hmgb1-201ENSMUST00000085546 Usp9yF8VPU6 2556 aa5.4□□□□□ -1.54
Hmgb1-201ENSMUST00000085546 Krtap29-1A2A5X4 342 aa5.4□□□□□ -1.54
Hmgb1-201ENSMUST00000085546 Rnase13Q5GAM7 153 aa5.4□□□□□ -1.54
Hmgb1-201ENSMUST00000085546 Krtap3-2Q9D638 99 aa5.39□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 Krtap3-3Q9D7P0 99 aa5.39□□□□□ -1.55
Hmgb1-201ENSMUST00000085546 TrrapQ80YV3 2565 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms