RNA–Protein interactions for RNA: ENSMUST00000080356.9

Snrpa-201, Transcript of U1 small nuclear ribonucleoprotein A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrpa, Length 1,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrpa-201ENSMUST00000080356 Krtap1-3A2A588 173 aa11.18□□□□□ -0.62
Snrpa-201ENSMUST00000080356 Plscr4P58196 326 aa11.18□□□□□ -0.62
Snrpa-201ENSMUST00000080356 Gnb1lQ9EQ15 326 aa11.18□□□□□ -0.62
Snrpa-201ENSMUST00000080356 Trappc1Q5NCF2 145 aa11.17□□□□□ -0.62
Snrpa-201ENSMUST00000080356 Smr3aQ61900 147 aa11.17□□□□□ -0.62
Snrpa-201ENSMUST00000080356 Lamtor3O88653 124 aa11.16□□□□□ -0.62
Snrpa-201ENSMUST00000080356 Defb37Q7TMD2 62 aa11.16□□□□□ -0.62
Snrpa-201ENSMUST00000080356 Vpreb3D3Z6J4 130 aa11.16□□□□□ -0.62
Snrpa-201ENSMUST00000080356 Defb29Q8BGW9 78 aa11.14□□□□□ -0.63
Snrpa-201ENSMUST00000080356 Gm5142Q8C5X9 133 aa11.14□□□□□ -0.63
Snrpa-201ENSMUST00000080356 Smim1P0C8K7 78 aa11.13□□□□□ -0.63
Snrpa-201ENSMUST00000080356 Gm5868Q8BJG1 145 aa11.13□□□□□ -0.63
Snrpa-201ENSMUST00000080356 Dnal4Q9DCM4 105 aa11.13□□□□□ -0.63
Snrpa-201ENSMUST00000080356 ZanO88799 5376 aa11.13□□□□□ -0.63
Snrpa-201ENSMUST00000080356 A0A286YE02 88 aa11.12□□□□□ -0.63
Snrpa-201ENSMUST00000080356 Gm10320E9PW43 113 aa11.12□□□□□ -0.63
Snrpa-201ENSMUST00000080356 SelenowP63300 88 aa11.1□□□□□ -0.63
Snrpa-201ENSMUST00000080356 Gm2310J3QNJ2 377 aa11.09□□□□□ -0.63
Snrpa-201ENSMUST00000080356 Gm9821Q8K076 103 aa11.09□□□□□ -0.63
Snrpa-201ENSMUST00000080356 BC107364E9Q5A2 140 aa11.07□□□□□ -0.64
Snrpa-201ENSMUST00000080356 Defb45Q3V490 66 aa11.07□□□□□ -0.64
Snrpa-201ENSMUST00000080356 Eif4ebp3Q80VV3 101 aa11.06□□□□□ -0.64
Snrpa-201ENSMUST00000080356 A830005F24RikQ8BRT5 167 aa11.06□□□□□ -0.64
Snrpa-201ENSMUST00000080356 Ighv10-1A0A0B4J1J6 119 aa11.05□□□□□ -0.64
Snrpa-201ENSMUST00000080356 H2al1nQ497L1 109 aa11.05□□□□□ -0.64
Snrpa-201ENSMUST00000080356 Gm21886J3QJU9 214 aa11.04□□□□□ -0.64
Snrpa-201ENSMUST00000080356 P0C913 63 aa11.04□□□□□ -0.64
Snrpa-201ENSMUST00000080356 2310057N15RikQ9D6T8 200 aa11.04□□□□□ -0.64
Snrpa-201ENSMUST00000080356 Igkv3-4A0A140T8Q4 119 aa11.03□□□□□ -0.64
Snrpa-201ENSMUST00000080356 Smim26Q3V460 107 aa11.03□□□□□ -0.64
Snrpa-201ENSMUST00000080356 IqcjQ8BPW0 110 aa11.03□□□□□ -0.64
Snrpa-201ENSMUST00000080356 S100a1P56565 94 aa11.01□□□□□ -0.65
Snrpa-201ENSMUST00000080356 Vmn1r197Q8R265 298 aa11.01□□□□□ -0.65
Snrpa-201ENSMUST00000080356 Vamp8O70404 101 aa10.99□□□□□ -0.65
Snrpa-201ENSMUST00000080356 Fat4Q2PZL6 4981 aa10.98□□□□□ -0.65
Snrpa-201ENSMUST00000080356 Gm10401E9Q3K6 71 aa10.97□□□□□ -0.65
Snrpa-201ENSMUST00000080356 Crct1Q6PAI5 102 aa10.97□□□□□ -0.65
Snrpa-201ENSMUST00000080356 Sec61bQ9CQS8 96 aaKnown RBP10.96□□□□□ -0.65
Snrpa-201ENSMUST00000080356 Q8BT88 171 aa10.95□□□□□ -0.66
Snrpa-201ENSMUST00000080356 Uqcc3Q8K2T4 89 aa10.95□□□□□ -0.66
Snrpa-201ENSMUST00000080356 Pam16Q9CQV1 125 aa10.95□□□□□ -0.66
Snrpa-201ENSMUST00000080356 Gm37389A0A0A6YW05 95 aa10.94□□□□□ -0.66
Snrpa-201ENSMUST00000080356 Krtap17-1A2A5X6 109 aa10.94□□□□□ -0.66
Snrpa-201ENSMUST00000080356 Rab37Q9JKM7 223 aa10.93□□□□□ -0.66
Snrpa-201ENSMUST00000080356 Rpl39lQ9CQD0 51 aa10.91□□□□□ -0.66
Snrpa-201ENSMUST00000080356 Krtap15-1Q9QZU5 150 aa10.91□□□□□ -0.66
Snrpa-201ENSMUST00000080356 Cited4Q9WUL8 182 aa10.91□□□□□ -0.66
Snrpa-201ENSMUST00000080356 A730071L15RikQ8C4X0 137 aa10.9□□□□□ -0.66
Snrpa-201ENSMUST00000080356 4930535I16RikQ9CUI2 172 aa10.9□□□□□ -0.66
Snrpa-201ENSMUST00000080356 Igkv8-21A0A140T8P7 120 aa10.9□□□□□ -0.67
Snrpa-201ENSMUST00000080356 Gm16253D3Z167 63 aa10.9□□□□□ -0.67
Snrpa-201ENSMUST00000080356 LorP18165 486 aa10.89□□□□□ -0.67
Snrpa-201ENSMUST00000080356 Gemin7Q9CWY4 129 aa10.89□□□□□ -0.67
Snrpa-201ENSMUST00000080356 Gm11939A2A592 99 aa10.88□□□□□ -0.67
Snrpa-201ENSMUST00000080356 Trav3-4A0A075B654 114 aa10.86□□□□□ -0.67
Snrpa-201ENSMUST00000080356 Tal2Q62282 108 aa10.86□□□□□ -0.67
Snrpa-201ENSMUST00000080356 P06320 134 aa10.84□□□□□ -0.67
Snrpa-201ENSMUST00000080356 1700018G05RikA0A1B0GSI2 66 aa10.83□□□□□ -0.68
Snrpa-201ENSMUST00000080356 Gm16381A0A1Y7VKT9 73 aa10.83□□□□□ -0.68
Snrpa-201ENSMUST00000080356 Igkv1-35A0A0G2JDE5 120 aa10.82□□□□□ -0.68
Snrpa-201ENSMUST00000080356 Gm19402J3QJV4 266 aa10.82□□□□□ -0.68
Snrpa-201ENSMUST00000080356 Chchd10Q7TNL9 138 aa10.82□□□□□ -0.68
Snrpa-201ENSMUST00000080356 CckP09240 115 aa10.8□□□□□ -0.68
Snrpa-201ENSMUST00000080356 Igkv8-28A0A0G2JE47 121 aa10.78□□□□□ -0.68
Snrpa-201ENSMUST00000080356 Rnf213E9Q555 5152 aaKnown RBP10.78□□□□□ -0.68
Snrpa-201ENSMUST00000080356 Igkv2-109A0A075B5K6 120 aa10.77□□□□□ -0.68
Snrpa-201ENSMUST00000080356 Gm11562A0PK51 136 aa10.77□□□□□ -0.68
Snrpa-201ENSMUST00000080356 Sigmar1O55242 223 aa10.76□□□□□ -0.69
Snrpa-201ENSMUST00000080356 Grcc10O35127 126 aa10.75□□□□□ -0.69
Snrpa-201ENSMUST00000080356 G0s2Q61585 103 aa10.74□□□□□ -0.69
Snrpa-201ENSMUST00000080356 Cox6a2P43023 97 aa10.71□□□□□ -0.69
Snrpa-201ENSMUST00000080356 Ctxnd2A0A1B0GQX3 59 aa10.69□□□□□ -0.7
Snrpa-201ENSMUST00000080356 Sfta2E9PXB6 77 aa10.69□□□□□ -0.7
Snrpa-201ENSMUST00000080356 Tma7Q8K003 64 aaKnown RBP10.69□□□□□ -0.7
Snrpa-201ENSMUST00000080356 2310034C09RikQ9D746 214 aa10.69□□□□□ -0.7
Snrpa-201ENSMUST00000080356 1700020N15RikL7MTX3 112 aa10.68□□□□□ -0.7
Snrpa-201ENSMUST00000080356 9530003J23RikQ8BM26 151 aa10.67□□□□□ -0.7
Snrpa-201ENSMUST00000080356 Gm10061D3Z714 54 aa10.66□□□□□ -0.7
Snrpa-201ENSMUST00000080356 Tac4Q99N14 128 aa10.66□□□□□ -0.7
Snrpa-201ENSMUST00000080356 Ifitm6A0A1B0GS75 124 aa10.65□□□□□ -0.7
Snrpa-201ENSMUST00000080356 Rpl37Q9D823 97 aa10.65□□□□□ -0.71
Snrpa-201ENSMUST00000080356 Defb47Q30KN1 79 aa10.63□□□□□ -0.71
Snrpa-201ENSMUST00000080356 Vps25Q9CQ80 176 aa10.63□□□□□ -0.71
Snrpa-201ENSMUST00000080356 Gm26620Q9CY65 116 aa10.63□□□□□ -0.71
Snrpa-201ENSMUST00000080356 Gm29423A0A087WRM1 55 aa10.61□□□□□ -0.71
Snrpa-201ENSMUST00000080356 Gm12353A2AGJ4 60 aa10.6□□□□□ -0.71
Snrpa-201ENSMUST00000080356 P01843 105 aa10.58□□□□□ -0.72
Snrpa-201ENSMUST00000080356 Igkv8-30A0A140T8M3 121 aa10.57□□□□□ -0.72
Snrpa-201ENSMUST00000080356 Cypt15B1AXS0 87 aa10.57□□□□□ -0.72
Snrpa-201ENSMUST00000080356 Krtap16-3Q8C1I6 86 aa10.57□□□□□ -0.72
Snrpa-201ENSMUST00000080356 Krtap19-3Q925H6 87 aa10.57□□□□□ -0.72
Snrpa-201ENSMUST00000080356 4930524J08RikQ9CUJ5 163 aa10.57□□□□□ -0.72
Snrpa-201ENSMUST00000080356 Ighv10-3A0A075B5T6 119 aa10.55□□□□□ -0.72
Snrpa-201ENSMUST00000080356 Krtap19-1Q925H2 87 aa10.55□□□□□ -0.72
Snrpa-201ENSMUST00000080356 1700042G07RikB1AUF7 90 aa10.52□□□□□ -0.72
Snrpa-201ENSMUST00000080356 CenpwQ3URR0 86 aa10.52□□□□□ -0.72
Snrpa-201ENSMUST00000080356 Smim13E9Q942 88 aa10.51□□□□□ -0.73
Snrpa-201ENSMUST00000080356 Gm10318A0A1W2P728 225 aa10.5□□□□□ -0.73
Snrpa-201ENSMUST00000080356 Gm11569B1AQB1 180 aa10.5□□□□□ -0.73
Snrpa-201ENSMUST00000080356 Krtap4-2B1AQ85 167 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 70.4 ms