RNA–Protein interactions for RNA: ENSMUST00000080356.9

Snrpa-201, Transcript of U1 small nuclear ribonucleoprotein A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrpa, Length 1,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrpa-201ENSMUST00000080356 Gm35339A0A140LHH9 1649 aa46.18■■■■■ 4.98
Snrpa-201ENSMUST00000080356 NischQ80TM9 1593 aa45.41■■■■■ 4.86
Snrpa-201ENSMUST00000080356 Abcc8B2RUS7 1588 aa44■■■■■ 4.63
Snrpa-201ENSMUST00000080356 Abcc9P70170 1546 aa43.93■■■■■ 4.62
Snrpa-201ENSMUST00000080356 ScribQ80U72 1612 aa42.65■■■■■ 4.42
Snrpa-201ENSMUST00000080356 NacadQ5SWP3 1504 aa41.24■■■■■ 4.19
Snrpa-201ENSMUST00000080356 Kdm5dQ62240 1548 aa41.15■■■■■ 4.18
Snrpa-201ENSMUST00000080356 Sycp2Q9CUU3 1500 aa40.45■■■■■ 4.07
Snrpa-201ENSMUST00000080356 Dcaf1Q80TR8 1506 aa40.41■■■■■ 4.06
Snrpa-201ENSMUST00000080356 BicraF8VPZ9 1578 aa39.96■■■■□ 3.99
Snrpa-201ENSMUST00000080356 Rb1cc1Q9ESK9 1588 aa39.56■■■■□ 3.92
Snrpa-201ENSMUST00000080356 Dnajc5bQ9CQ94 199 aa39.3■■■■□ 3.88
Snrpa-201ENSMUST00000080356 Baz1aO88379 1555 aa38.97■■■■□ 3.83
Snrpa-201ENSMUST00000080356 Ccdc180J3QNE4 1664 aa38.9■■■■□ 3.82
Snrpa-201ENSMUST00000080356 Pds5bQ4VA53 1446 aaKnown RBP38.88■■■■□ 3.81
Snrpa-201ENSMUST00000080356 Crybg2B7ZCC2 1516 aa38.86■■■■□ 3.81
Snrpa-201ENSMUST00000080356 Rhox8Q6VSS7 320 aa38.85■■■■□ 3.81
Snrpa-201ENSMUST00000080356 Thoc2B1AZI6 1594 aaKnown RBP38.71■■■■□ 3.79
Snrpa-201ENSMUST00000080356 Atad2bE9Q166 1460 aaKnown RBP38.46■■■■□ 3.75
Snrpa-201ENSMUST00000080356 Zcchc6Q5BLK4 1491 aaKnown RBP38.45■■■■□ 3.75
Snrpa-201ENSMUST00000080356 Ercc6F8VPZ5 1481 aa38.07■■■■□ 3.68
Snrpa-201ENSMUST00000080356 Cc2d2aQ8CFW7 1633 aa38.06■■■■□ 3.68
Snrpa-201ENSMUST00000080356 Smarca4Q3TKT4 1613 aaKnown RBP38.02■■■■□ 3.68
Snrpa-201ENSMUST00000080356 Smarca2Q6DIC0 1577 aa38■■■■□ 3.67
Snrpa-201ENSMUST00000080356 Iqgap2Q3UQ44 1575 aa37.87■■■■□ 3.65
Snrpa-201ENSMUST00000080356 Cecr2E9Q2Z1 1453 aa37.81■■■■□ 3.64
Snrpa-201ENSMUST00000080356 Fam135aQ6NS59 1506 aa37.77■■■■□ 3.64
Snrpa-201ENSMUST00000080356 Wdr62Q3U3T8 1523 aa37.59■■■■□ 3.61
Snrpa-201ENSMUST00000080356 Frmpd1A2AKB4 1549 aa37.53■■■■□ 3.6
Snrpa-201ENSMUST00000080356 Phldb1Q6PDH0 1371 aaKnown RBP37.39■■■■□ 3.58
Snrpa-201ENSMUST00000080356 Baz1bQ9Z277 1479 aa37.32■■■■□ 3.56
Snrpa-201ENSMUST00000080356 Ubl4bQ9CQ84 188 aa37.03■■■■□ 3.52
Snrpa-201ENSMUST00000080356 Unc13aQ4KUS2 1712 aa37.02■■■■□ 3.52
Snrpa-201ENSMUST00000080356 Rtl1Q7M732 1744 aa36.9■■■■□ 3.5
Snrpa-201ENSMUST00000080356 CftrP26361 1476 aa36.89■■■■□ 3.5
Snrpa-201ENSMUST00000080356 Cttnbp2B9EJA2 1648 aa36.87■■■■□ 3.49
Snrpa-201ENSMUST00000080356 Mrc2Q64449 1479 aa36.87■■■■□ 3.49
Snrpa-201ENSMUST00000080356 Synj1Q8CHC4 1574 aa36.79■■■■□ 3.48
Snrpa-201ENSMUST00000080356 Brd4Q9ESU6 1400 aaKnown RBP36.7■■■■□ 3.47
Snrpa-201ENSMUST00000080356 Ccdc136Q3TVA9 1136 aa36.43■■■■□ 3.42
Snrpa-201ENSMUST00000080356 Esf1Q3V1V3 845 aaKnown RBP36.16■■■■□ 3.38
Snrpa-201ENSMUST00000080356 Cux2P70298 1426 aa36.13■■■■□ 3.37
Snrpa-201ENSMUST00000080356 Rsf1E9PWW9 1441 aaKnown RBP36.12■■■■□ 3.37
Snrpa-201ENSMUST00000080356 Lrriq1Q0P5X1 1673 aa36.1■■■■□ 3.37
Snrpa-201ENSMUST00000080356 Kif15Q6P9L6 1387 aa36.08■■■■□ 3.37
Snrpa-201ENSMUST00000080356 Trim41Q5NCC3 630 aa35.94■■■■□ 3.34
Snrpa-201ENSMUST00000080356 Kif21aQ9QXL2 1672 aa35.94■■■■□ 3.34
Snrpa-201ENSMUST00000080356 Lamc3Q9R0B6 1581 aa35.9■■■■□ 3.34
Snrpa-201ENSMUST00000080356 Dnajc5P60904 198 aa35.88■■■■□ 3.33
Snrpa-201ENSMUST00000080356 Npm1Q61937 292 aaKnown RBP35.69■■■■□ 3.3
Snrpa-201ENSMUST00000080356 Eif4g3Q80XI3 1579 aaKnown RBP35.59■■■■□ 3.29
Snrpa-201ENSMUST00000080356 Cep164Q5DU05 1446 aa35.58■■■■□ 3.29
Snrpa-201ENSMUST00000080356 TnnQ80Z71 1560 aa35.42■■■■□ 3.26
Snrpa-201ENSMUST00000080356 Urb2E9Q7L1 1524 aaKnown RBP35.37■■■■□ 3.25
Snrpa-201ENSMUST00000080356 Ccdc18Q640L5 1455 aa35.36■■■■□ 3.25
Snrpa-201ENSMUST00000080356 Dhx29Q6PGC1 1365 aaKnown RBP35.36■■■■□ 3.25
Snrpa-201ENSMUST00000080356 Shroom2A2ALU4 1481 aa35.33■■■■□ 3.25
Snrpa-201ENSMUST00000080356 Top2bQ64511 1612 aa35.32■■■■□ 3.24
Snrpa-201ENSMUST00000080356 Plb1Q3TTY0 1478 aa35.29■■■■□ 3.24
Snrpa-201ENSMUST00000080356 Golga3P55937 1487 aa35.28■■■■□ 3.24
Snrpa-201ENSMUST00000080356 Il27Q8K3I6 234 aa35.26■■■■□ 3.24
Snrpa-201ENSMUST00000080356 Camsap1A2AHC3 1581 aa35.23■■■■□ 3.23
Snrpa-201ENSMUST00000080356 LrpprcQ6PB66 1392 aaKnown RBP35.23■■■■□ 3.23
Snrpa-201ENSMUST00000080356 Crocc2F6XLV1 1638 aa35.18■■■■□ 3.22
Snrpa-201ENSMUST00000080356 Cngb1E1AZ71 1325 aa35.11■■■■□ 3.21
Snrpa-201ENSMUST00000080356 PogzQ8BZH4 1409 aaKnown RBP35.01■■■■□ 3.2
Snrpa-201ENSMUST00000080356 Ift140E9PY46 1464 aa34.97■■■■□ 3.19
Snrpa-201ENSMUST00000080356 Fmn1Q05860 1466 aa34.97■■■■□ 3.19
Snrpa-201ENSMUST00000080356 Rusc2Q80U22 1514 aa34.93■■■■□ 3.18
Snrpa-201ENSMUST00000080356 Col17a1Q07563 1470 aa34.88■■■■□ 3.17
Snrpa-201ENSMUST00000080356 Pabpn1Q8CCS6 302 aaKnown RBP34.87■■■■□ 3.17
Snrpa-201ENSMUST00000080356 Duox2A2AQ99 1517 aa34.82■■■■□ 3.17
Snrpa-201ENSMUST00000080356 Grin2bQ01097 1482 aa34.71■■■■□ 3.15
Snrpa-201ENSMUST00000080356 Disp1Q3TDN0 1521 aa34.67■■■■□ 3.14
Snrpa-201ENSMUST00000080356 Pelp1Q9DBD5 1123 aaKnown RBP34.62■■■■□ 3.13
Snrpa-201ENSMUST00000080356 Samd9lQ69Z37 1561 aa34.57■■■■□ 3.13
Snrpa-201ENSMUST00000080356 Nup160Q9Z0W3 1402 aaKnown RBP34.54■■■■□ 3.12
Snrpa-201ENSMUST00000080356 Pbrm1Q8BSQ9 1634 aaKnown RBP34.54■■■■□ 3.12
Snrpa-201ENSMUST00000080356 Cc2d2bA0A286YDU8 1405 aa34.49■■■■□ 3.11
Snrpa-201ENSMUST00000080356 Zcchc11B2RX14 1644 aaKnown RBP34.49■■■■□ 3.11
Snrpa-201ENSMUST00000080356 Efcab5A0JP43 1406 aa34.48■■■■□ 3.11
Snrpa-201ENSMUST00000080356 Setd1bQ8CFT2 1985 aa34.48■■■■□ 3.11
Snrpa-201ENSMUST00000080356 Rad54l2Q99NG0 1466 aa34.32■■■■□ 3.08
Snrpa-201ENSMUST00000080356 Grin2aP35436 1464 aa34.27■■■■□ 3.08
Snrpa-201ENSMUST00000080356 Ccdc88bQ4QRL3 1481 aa34.27■■■■□ 3.08
Snrpa-201ENSMUST00000080356 Magi3Q9EQJ9 1476 aa34.27■■■■□ 3.08
Snrpa-201ENSMUST00000080356 AqrQ8CFQ3 1481 aaKnown RBP34.25■■■■□ 3.07
Snrpa-201ENSMUST00000080356 Top2aQ01320 1528 aaKnown RBP34.24■■■■□ 3.07
Snrpa-201ENSMUST00000080356 NrkQ9R0G8 1455 aa34.23■■■■□ 3.07
Snrpa-201ENSMUST00000080356 Fgd6Q69ZL1 1399 aa34.17■■■■□ 3.06
Snrpa-201ENSMUST00000080356 Adgrl3Q80TS3 1537 aa34.09■■■■□ 3.05
Snrpa-201ENSMUST00000080356 Shroom4Q1W617 1475 aa34.07■■■■□ 3.04
Snrpa-201ENSMUST00000080356 Gpatch8A2A6A1 1505 aa34.06■■■■□ 3.04
Snrpa-201ENSMUST00000080356 PtprkP35822 1457 aa34.05■■■■□ 3.04
Snrpa-201ENSMUST00000080356 Cep170Q6A065 1588 aa34.03■■■■□ 3.04
Snrpa-201ENSMUST00000080356 Pla2r1Q62028 1487 aa34.03■■■■□ 3.04
Snrpa-201ENSMUST00000080356 Gapvd1Q6PAR5 1458 aa34.02■■■■□ 3.04
Snrpa-201ENSMUST00000080356 SynmQ70IV5 1561 aa34■■■■□ 3.03
Snrpa-201ENSMUST00000080356 Arhgef5E9Q7D5 1581 aa33.94■■■■□ 3.02
Snrpa-201ENSMUST00000080356 Chic1Q8CBW7 227 aa33.94■■■■□ 3.02
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms