RNA–Protein interactions for RNA: ENSMUST00000080356.9

Snrpa-201, Transcript of U1 small nuclear ribonucleoprotein A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrpa, Length 1,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrpa-201ENSMUST00000080356 Gm35339A0A140LHH9 1649 aa46,18■■■■■ 4,98
Snrpa-201ENSMUST00000080356 NischQ80TM9 1593 aa45,41■■■■■ 4,86
Snrpa-201ENSMUST00000080356 Abcc8B2RUS7 1588 aa44■■■■■ 4,63
Snrpa-201ENSMUST00000080356 Abcc9P70170 1546 aa43,93■■■■■ 4,62
Snrpa-201ENSMUST00000080356 ScribQ80U72 1612 aa42,65■■■■■ 4,42
Snrpa-201ENSMUST00000080356 NacadQ5SWP3 1504 aa41,24■■■■■ 4,19
Snrpa-201ENSMUST00000080356 Kdm5dQ62240 1548 aa41,15■■■■■ 4,18
Snrpa-201ENSMUST00000080356 Sycp2Q9CUU3 1500 aa40,45■■■■■ 4,07
Snrpa-201ENSMUST00000080356 Dcaf1Q80TR8 1506 aa40,41■■■■■ 4,06
Snrpa-201ENSMUST00000080356 BicraF8VPZ9 1578 aa39,96■■■■□ 3,99
Snrpa-201ENSMUST00000080356 Rb1cc1Q9ESK9 1588 aa39,56■■■■□ 3,92
Snrpa-201ENSMUST00000080356 Dnajc5bQ9CQ94 199 aa39,3■■■■□ 3,88
Snrpa-201ENSMUST00000080356 Baz1aO88379 1555 aa38,97■■■■□ 3,83
Snrpa-201ENSMUST00000080356 Ccdc180J3QNE4 1664 aa38,9■■■■□ 3,82
Snrpa-201ENSMUST00000080356 Pds5bQ4VA53 1446 aaKnown RBP38,88■■■■□ 3,81
Snrpa-201ENSMUST00000080356 Crybg2B7ZCC2 1516 aa38,86■■■■□ 3,81
Snrpa-201ENSMUST00000080356 Rhox8Q6VSS7 320 aa38,85■■■■□ 3,81
Snrpa-201ENSMUST00000080356 Thoc2B1AZI6 1594 aaKnown RBP38,71■■■■□ 3,79
Snrpa-201ENSMUST00000080356 Atad2bE9Q166 1460 aaKnown RBP38,46■■■■□ 3,75
Snrpa-201ENSMUST00000080356 Zcchc6Q5BLK4 1491 aaKnown RBP38,45■■■■□ 3,75
Snrpa-201ENSMUST00000080356 Ercc6F8VPZ5 1481 aa38,07■■■■□ 3,68
Snrpa-201ENSMUST00000080356 Cc2d2aQ8CFW7 1633 aa38,06■■■■□ 3,68
Snrpa-201ENSMUST00000080356 Smarca4Q3TKT4 1613 aaKnown RBP38,02■■■■□ 3,68
Snrpa-201ENSMUST00000080356 Smarca2Q6DIC0 1577 aa38■■■■□ 3,67
Snrpa-201ENSMUST00000080356 Iqgap2Q3UQ44 1575 aa37,87■■■■□ 3,65
Snrpa-201ENSMUST00000080356 Cecr2E9Q2Z1 1453 aa37,81■■■■□ 3,64
Snrpa-201ENSMUST00000080356 Fam135aQ6NS59 1506 aa37,77■■■■□ 3,64
Snrpa-201ENSMUST00000080356 Wdr62Q3U3T8 1523 aa37,59■■■■□ 3,61
Snrpa-201ENSMUST00000080356 Frmpd1A2AKB4 1549 aa37,53■■■■□ 3,6
Snrpa-201ENSMUST00000080356 Phldb1Q6PDH0 1371 aaKnown RBP37,39■■■■□ 3,58
Snrpa-201ENSMUST00000080356 Baz1bQ9Z277 1479 aa37,32■■■■□ 3,56
Snrpa-201ENSMUST00000080356 Ubl4bQ9CQ84 188 aa37,03■■■■□ 3,52
Snrpa-201ENSMUST00000080356 Unc13aQ4KUS2 1712 aa37,02■■■■□ 3,52
Snrpa-201ENSMUST00000080356 Rtl1Q7M732 1744 aa36,9■■■■□ 3,5
Snrpa-201ENSMUST00000080356 CftrP26361 1476 aa36,89■■■■□ 3,5
Snrpa-201ENSMUST00000080356 Cttnbp2B9EJA2 1648 aa36,87■■■■□ 3,49
Snrpa-201ENSMUST00000080356 Mrc2Q64449 1479 aa36,87■■■■□ 3,49
Snrpa-201ENSMUST00000080356 Synj1Q8CHC4 1574 aa36,79■■■■□ 3,48
Snrpa-201ENSMUST00000080356 Brd4Q9ESU6 1400 aaKnown RBP36,7■■■■□ 3,47
Snrpa-201ENSMUST00000080356 Ccdc136Q3TVA9 1136 aa36,43■■■■□ 3,42
Snrpa-201ENSMUST00000080356 Esf1Q3V1V3 845 aaKnown RBP36,16■■■■□ 3,38
Snrpa-201ENSMUST00000080356 Cux2P70298 1426 aa36,13■■■■□ 3,37
Snrpa-201ENSMUST00000080356 Rsf1E9PWW9 1441 aaKnown RBP36,12■■■■□ 3,37
Snrpa-201ENSMUST00000080356 Lrriq1Q0P5X1 1673 aa36,1■■■■□ 3,37
Snrpa-201ENSMUST00000080356 Kif15Q6P9L6 1387 aa36,08■■■■□ 3,37
Snrpa-201ENSMUST00000080356 Trim41Q5NCC3 630 aa35,94■■■■□ 3,34
Snrpa-201ENSMUST00000080356 Kif21aQ9QXL2 1672 aa35,94■■■■□ 3,34
Snrpa-201ENSMUST00000080356 Lamc3Q9R0B6 1581 aa35,9■■■■□ 3,34
Snrpa-201ENSMUST00000080356 Dnajc5P60904 198 aa35,88■■■■□ 3,33
Snrpa-201ENSMUST00000080356 Npm1Q61937 292 aaKnown RBP35,69■■■■□ 3,3
Snrpa-201ENSMUST00000080356 Eif4g3Q80XI3 1579 aaKnown RBP35,59■■■■□ 3,29
Snrpa-201ENSMUST00000080356 Cep164Q5DU05 1446 aa35,58■■■■□ 3,29
Snrpa-201ENSMUST00000080356 TnnQ80Z71 1560 aa35,42■■■■□ 3,26
Snrpa-201ENSMUST00000080356 Urb2E9Q7L1 1524 aaKnown RBP35,37■■■■□ 3,25
Snrpa-201ENSMUST00000080356 Ccdc18Q640L5 1455 aa35,36■■■■□ 3,25
Snrpa-201ENSMUST00000080356 Dhx29Q6PGC1 1365 aaKnown RBP35,36■■■■□ 3,25
Snrpa-201ENSMUST00000080356 Shroom2A2ALU4 1481 aa35,33■■■■□ 3,25
Snrpa-201ENSMUST00000080356 Top2bQ64511 1612 aa35,32■■■■□ 3,24
Snrpa-201ENSMUST00000080356 Plb1Q3TTY0 1478 aa35,29■■■■□ 3,24
Snrpa-201ENSMUST00000080356 Golga3P55937 1487 aa35,28■■■■□ 3,24
Snrpa-201ENSMUST00000080356 Il27Q8K3I6 234 aa35,26■■■■□ 3,24
Snrpa-201ENSMUST00000080356 Camsap1A2AHC3 1581 aa35,23■■■■□ 3,23
Snrpa-201ENSMUST00000080356 LrpprcQ6PB66 1392 aaKnown RBP35,23■■■■□ 3,23
Snrpa-201ENSMUST00000080356 Crocc2F6XLV1 1638 aa35,18■■■■□ 3,22
Snrpa-201ENSMUST00000080356 Cngb1E1AZ71 1325 aa35,11■■■■□ 3,21
Snrpa-201ENSMUST00000080356 PogzQ8BZH4 1409 aaKnown RBP35,01■■■■□ 3,2
Snrpa-201ENSMUST00000080356 Ift140E9PY46 1464 aa34,97■■■■□ 3,19
Snrpa-201ENSMUST00000080356 Fmn1Q05860 1466 aa34,97■■■■□ 3,19
Snrpa-201ENSMUST00000080356 Rusc2Q80U22 1514 aa34,93■■■■□ 3,18
Snrpa-201ENSMUST00000080356 Col17a1Q07563 1470 aa34,88■■■■□ 3,17
Snrpa-201ENSMUST00000080356 Pabpn1Q8CCS6 302 aaKnown RBP34,87■■■■□ 3,17
Snrpa-201ENSMUST00000080356 Duox2A2AQ99 1517 aa34,82■■■■□ 3,17
Snrpa-201ENSMUST00000080356 Grin2bQ01097 1482 aa34,71■■■■□ 3,15
Snrpa-201ENSMUST00000080356 Disp1Q3TDN0 1521 aa34,67■■■■□ 3,14
Snrpa-201ENSMUST00000080356 Pelp1Q9DBD5 1123 aaKnown RBP34,62■■■■□ 3,13
Snrpa-201ENSMUST00000080356 Samd9lQ69Z37 1561 aa34,57■■■■□ 3,13
Snrpa-201ENSMUST00000080356 Nup160Q9Z0W3 1402 aaKnown RBP34,54■■■■□ 3,12
Snrpa-201ENSMUST00000080356 Pbrm1Q8BSQ9 1634 aaKnown RBP34,54■■■■□ 3,12
Snrpa-201ENSMUST00000080356 Cc2d2bA0A286YDU8 1405 aa34,49■■■■□ 3,11
Snrpa-201ENSMUST00000080356 Zcchc11B2RX14 1644 aaKnown RBP34,49■■■■□ 3,11
Snrpa-201ENSMUST00000080356 Efcab5A0JP43 1406 aa34,48■■■■□ 3,11
Snrpa-201ENSMUST00000080356 Setd1bQ8CFT2 1985 aa34,48■■■■□ 3,11
Snrpa-201ENSMUST00000080356 Rad54l2Q99NG0 1466 aa34,32■■■■□ 3,08
Snrpa-201ENSMUST00000080356 Grin2aP35436 1464 aa34,27■■■■□ 3,08
Snrpa-201ENSMUST00000080356 Ccdc88bQ4QRL3 1481 aa34,27■■■■□ 3,08
Snrpa-201ENSMUST00000080356 Magi3Q9EQJ9 1476 aa34,27■■■■□ 3,08
Snrpa-201ENSMUST00000080356 AqrQ8CFQ3 1481 aaKnown RBP34,25■■■■□ 3,07
Snrpa-201ENSMUST00000080356 Top2aQ01320 1528 aaKnown RBP34,24■■■■□ 3,07
Snrpa-201ENSMUST00000080356 NrkQ9R0G8 1455 aa34,23■■■■□ 3,07
Snrpa-201ENSMUST00000080356 Fgd6Q69ZL1 1399 aa34,17■■■■□ 3,06
Snrpa-201ENSMUST00000080356 Adgrl3Q80TS3 1537 aa34,09■■■■□ 3,05
Snrpa-201ENSMUST00000080356 Shroom4Q1W617 1475 aa34,07■■■■□ 3,04
Snrpa-201ENSMUST00000080356 Gpatch8A2A6A1 1505 aa34,06■■■■□ 3,04
Snrpa-201ENSMUST00000080356 PtprkP35822 1457 aa34,05■■■■□ 3,04
Snrpa-201ENSMUST00000080356 Cep170Q6A065 1588 aa34,03■■■■□ 3,04
Snrpa-201ENSMUST00000080356 Pla2r1Q62028 1487 aa34,03■■■■□ 3,04
Snrpa-201ENSMUST00000080356 Gapvd1Q6PAR5 1458 aa34,02■■■■□ 3,04
Snrpa-201ENSMUST00000080356 SynmQ70IV5 1561 aa34■■■■□ 3,03
Snrpa-201ENSMUST00000080356 Arhgef5E9Q7D5 1581 aa33,94■■■■□ 3,02
Snrpa-201ENSMUST00000080356 Chic1Q8CBW7 227 aa33,94■■■■□ 3,02
Retrieved 100 of 22,080 RNA–protein pairs in 28,8 ms