RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Gm11213A0A1B0GR83 88 aa11.46□□□□□ -0.58
Sdc3-201ENSMUST00000070478 Defb1P56386 69 aa11.46□□□□□ -0.58
Sdc3-201ENSMUST00000070478 Phxr5P08399 672 aa11.45□□□□□ -0.58
Sdc3-201ENSMUST00000070478 Gm20661K7N787 53 aa11.44□□□□□ -0.58
Sdc3-201ENSMUST00000070478 Cypt15B1AXS0 87 aa11.44□□□□□ -0.58
Sdc3-201ENSMUST00000070478 Zcchc13Q9D548 170 aa11.42□□□□□ -0.58
Sdc3-201ENSMUST00000070478 Coa5Q99M07 74 aa11.41□□□□□ -0.58
Sdc3-201ENSMUST00000070478 Fam104aA2A6P4 185 aa11.4□□□□□ -0.58
Sdc3-201ENSMUST00000070478 AspmQ8CJ27 3122 aa11.4□□□□□ -0.58
Sdc3-201ENSMUST00000070478 Gm12216A0A1W2P827 62 aa11.38□□□□□ -0.59
Sdc3-201ENSMUST00000070478 Prr13Q9CQJ5 137 aa11.37□□□□□ -0.59
Sdc3-201ENSMUST00000070478 Szt2A2A9C3 3431 aa11.35□□□□□ -0.59
Sdc3-201ENSMUST00000070478 Cdc42se1Q8BHL7 80 aa11.35□□□□□ -0.59
Sdc3-201ENSMUST00000070478 Smim29Q8R043 75 aa11.31□□□□□ -0.6
Sdc3-201ENSMUST00000070478 Lrrc37aB1AWG4 3215 aa11.3□□□□□ -0.6
Sdc3-201ENSMUST00000070478 Muc2Q80Z19 2680 aa11.27□□□□□ -0.6
Sdc3-201ENSMUST00000070478 9530053A07RikE9PVG8 2581 aa11.27□□□□□ -0.61
Sdc3-201ENSMUST00000070478 Col6a5A6H584 2640 aa11.25□□□□□ -0.61
Sdc3-201ENSMUST00000070478 Gm10065F6TJM2 114 aa11.24□□□□□ -0.61
Sdc3-201ENSMUST00000070478 Gm26620Q9CY65 116 aa11.24□□□□□ -0.61
Sdc3-201ENSMUST00000070478 Unc80Q8BLN6 3261 aa11.23□□□□□ -0.61
Sdc3-201ENSMUST00000070478 NbdyA0A0N4SUI7 68 aa11.23□□□□□ -0.61
Sdc3-201ENSMUST00000070478 Tep1P97499 2629 aa11.22□□□□□ -0.61
Sdc3-201ENSMUST00000070478 Pkd1l1Q8R526 2615 aa11.22□□□□□ -0.61
Sdc3-201ENSMUST00000070478 Nbeal2Q6ZQA0 2742 aa11.21□□□□□ -0.61
Sdc3-201ENSMUST00000070478 Phxr4P15974 95 aa11.21□□□□□ -0.62
Sdc3-201ENSMUST00000070478 Cypt14J3QPF7 87 aa11.19□□□□□ -0.62
Sdc3-201ENSMUST00000070478 Gm36176A0A1W2P8D5 158 aa11.18□□□□□ -0.62
Sdc3-201ENSMUST00000070478 Chtf8P0CG14 533 aa11.16□□□□□ -0.62
Sdc3-201ENSMUST00000070478 Stab2Q8R4U0 2559 aa11.14□□□□□ -0.63
Sdc3-201ENSMUST00000070478 Gm17349F7BGH6 99 aa11.14□□□□□ -0.63
Sdc3-201ENSMUST00000070478 Fam229bQ8CF36 80 aa11.14□□□□□ -0.63
Sdc3-201ENSMUST00000070478 Celsr1O35161 3034 aa11.13□□□□□ -0.63
Sdc3-201ENSMUST00000070478 Gm10320E9PW43 113 aa11.13□□□□□ -0.63
Sdc3-201ENSMUST00000070478 Uqcr11Q9CPX8 56 aa11.11□□□□□ -0.63
Sdc3-201ENSMUST00000070478 Rnase13Q5GAM7 153 aa11.11□□□□□ -0.63
Sdc3-201ENSMUST00000070478 Frem2Q6NVD0 3160 aa11.08□□□□□ -0.64
Sdc3-201ENSMUST00000070478 Hivep1Q03172 2688 aa11.07□□□□□ -0.64
Sdc3-201ENSMUST00000070478 FrylF8VQ05 3007 aa11.06□□□□□ -0.64
Sdc3-201ENSMUST00000070478 2310034C09RikQ9D746 214 aa11.04□□□□□ -0.64
Sdc3-201ENSMUST00000070478 Celsr3Q91ZI0 3301 aa11.01□□□□□ -0.65
Sdc3-201ENSMUST00000070478 Sprr1aQ62266 144 aa11.01□□□□□ -0.65
Sdc3-201ENSMUST00000070478 Gm9508A0A1W2P7W0 230 aa11□□□□□ -0.65
Sdc3-201ENSMUST00000070478 BptfA2A654 3036 aaKnown RBP11□□□□□ -0.65
Sdc3-201ENSMUST00000070478 Lama1P19137 3084 aa11□□□□□ -0.65
Sdc3-201ENSMUST00000070478 Wdfy4E9Q2M9 3149 aa11□□□□□ -0.65
Sdc3-201ENSMUST00000070478 6030445D17RikE9Q8F9 148 aa10.97□□□□□ -0.65
Sdc3-201ENSMUST00000070478 Gm9821Q8K076 103 aa10.96□□□□□ -0.66
Sdc3-201ENSMUST00000070478 Gm10139O88245 57 aa10.95□□□□□ -0.66
Sdc3-201ENSMUST00000070478 Odf3bQ5M8M2 238 aa10.94□□□□□ -0.66
Sdc3-201ENSMUST00000070478 FryE9Q8I9 3020 aa10.93□□□□□ -0.66
Sdc3-201ENSMUST00000070478 Mp68P56379 58 aa10.93□□□□□ -0.66
Sdc3-201ENSMUST00000070478 Gm21798J3QNU5 87 aa10.92□□□□□ -0.66
Sdc3-201ENSMUST00000070478 NbeaQ9EPN1 2936 aa10.92□□□□□ -0.66
Sdc3-201ENSMUST00000070478 Tex15F8VPN2 2785 aa10.9□□□□□ -0.66
Sdc3-201ENSMUST00000070478 Adgrg4B7ZCC9 3073 aa10.9□□□□□ -0.67
Sdc3-201ENSMUST00000070478 Dmxl2Q8BPN8 3032 aa10.89□□□□□ -0.67
Sdc3-201ENSMUST00000070478 Gm10643Q3URG9 111 aa10.87□□□□□ -0.67
Sdc3-201ENSMUST00000070478 Utp20Q5XG71 2788 aaKnown RBP10.85□□□□□ -0.67
Sdc3-201ENSMUST00000070478 Brca2P97929 3329 aa10.84□□□□□ -0.67
Sdc3-201ENSMUST00000070478 Itpr2Q9Z329 2701 aa10.81□□□□□ -0.68
Sdc3-201ENSMUST00000070478 Gm4491E0CX42 125 aa10.79□□□□□ -0.68
Sdc3-201ENSMUST00000070478 Col6a3E9PWQ3 3284 aa10.79□□□□□ -0.68
Sdc3-201ENSMUST00000070478 FlncQ8VHX6 2726 aaKnown RBP10.79□□□□□ -0.68
Sdc3-201ENSMUST00000070478 DspE9Q557 2883 aaKnown RBP10.76□□□□□ -0.69
Sdc3-201ENSMUST00000070478 A730071L15RikQ8C4X0 137 aa10.75□□□□□ -0.69
Sdc3-201ENSMUST00000070478 Cystm1Q8K353 104 aa10.74□□□□□ -0.69
Sdc3-201ENSMUST00000070478 Gm16253D3Z167 63 aa10.74□□□□□ -0.69
Sdc3-201ENSMUST00000070478 Krtap15-1Q9QZU5 150 aa10.71□□□□□ -0.7
Sdc3-201ENSMUST00000070478 Igfn1Q3KNY0 2849 aa10.68□□□□□ -0.7
Sdc3-201ENSMUST00000070478 Zzef1Q5SSH7 2924 aa10.68□□□□□ -0.7
Sdc3-201ENSMUST00000070478 Krtap29-1A2A5X4 342 aa10.68□□□□□ -0.7
Sdc3-201ENSMUST00000070478 FcgbpE9Q0B5 2583 aa10.67□□□□□ -0.7
Sdc3-201ENSMUST00000070478 Dchs2A0A0A6YW72 3346 aa10.65□□□□□ -0.7
Sdc3-201ENSMUST00000070478 Gm9507D3Z5T3 223 aa10.65□□□□□ -0.7
Sdc3-201ENSMUST00000070478 Krtap13O88375 197 aa10.65□□□□□ -0.71
Sdc3-201ENSMUST00000070478 VcanQ62059 3357 aa10.64□□□□□ -0.71
Sdc3-201ENSMUST00000070478 Gm9955Q8CEJ8 102 aa10.63□□□□□ -0.71
Sdc3-201ENSMUST00000070478 Spink7Q6IE32 76 aa10.61□□□□□ -0.71
Sdc3-201ENSMUST00000070478 Celsr2Q9R0M0 2920 aa10.6□□□□□ -0.71
Sdc3-201ENSMUST00000070478 Chd9Q8BYH8 2885 aa10.57□□□□□ -0.72
Sdc3-201ENSMUST00000070478 Gm3880A0A1B0GSB3 72 aa10.57□□□□□ -0.72
Sdc3-201ENSMUST00000070478 2310050C09RikG5E8Z3 280 aa10.57□□□□□ -0.72
Sdc3-201ENSMUST00000070478 Gm37013Q8K491 104 aa10.57□□□□□ -0.72
Sdc3-201ENSMUST00000070478 Pla2g10Q9QXX3 151 aa10.55□□□□□ -0.72
Sdc3-201ENSMUST00000070478 CriptO70333 101 aa10.53□□□□□ -0.72
Sdc3-201ENSMUST00000070478 2310061N02RikQ9D6S9 174 aa10.53□□□□□ -0.72
Sdc3-201ENSMUST00000070478 Trank1Q8BV79 2999 aa10.49□□□□□ -0.73
Sdc3-201ENSMUST00000070478 Tenm4Q3UHK6 2771 aa10.48□□□□□ -0.73
Sdc3-201ENSMUST00000070478 Krtap10-4Q08EG8 221 aa10.48□□□□□ -0.73
Sdc3-201ENSMUST00000070478 Fam229aB2KGE5 128 aa10.46□□□□□ -0.74
Sdc3-201ENSMUST00000070478 Gm20538F6Z9R1 75 aa10.45□□□□□ -0.74
Sdc3-201ENSMUST00000070478 Dchs1E9PVD3 3291 aa10.45□□□□□ -0.74
Sdc3-201ENSMUST00000070478 Gm5767A0A0J9YTU8 78 aa10.44□□□□□ -0.74
Sdc3-201ENSMUST00000070478 Nf1Q04690 2841 aa10.43□□□□□ -0.74
Sdc3-201ENSMUST00000070478 Sec61bQ9CQS8 96 aaKnown RBP10.43□□□□□ -0.74
Sdc3-201ENSMUST00000070478 Krtap14O08640 167 aa10.41□□□□□ -0.74
Sdc3-201ENSMUST00000070478 Srrm2Q8BTI8 2703 aaKnown RBP10.36□□□□□ -0.75
Sdc3-201ENSMUST00000070478 TgO08710 2766 aa10.35□□□□□ -0.75
Sdc3-201ENSMUST00000070478 Krtap10-10A0A1W2P7T6 217 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms