RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Sprr4Q8CGN8 76 aa4.58□□□□□ -1.68
Col6a6-201ENSMUST00000060896 AY074887Q8R5F9 132 aa4.58□□□□□ -1.68
Col6a6-201ENSMUST00000060896 1810062G17RikG3X8Y2 129 aa4.58□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Pde6gP09174 87 aa4.58□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Gm9903Q8C9Y8 129 aa4.58□□□□□ -1.68
Col6a6-201ENSMUST00000060896 P01819 144 aa4.57□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Sprr1bQ62267 153 aa4.57□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Fam19a3Q7TPG6 132 aa4.57□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Gm17689B3GLJ4 109 aa4.57□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Gm10320E9PW43 113 aa4.57□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Gm10770F7D043 238 aa4.57□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Phxr5P08399 672 aa4.57□□□□□ -1.68
Col6a6-201ENSMUST00000060896 A530084C06RikQ3UTW2 186 aa4.57□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Krtap16-1A2A5X5 502 aa4.57□□□□□ -1.68
Col6a6-201ENSMUST00000060896 1700018G05RikA0A1B0GSI2 66 aa4.56□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Gm10837Q3UTT8 145 aa4.56□□□□□ -1.68
Col6a6-201ENSMUST00000060896 6430550D23RikE9Q1X6 194 aa4.56□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Phf5aP83870 110 aaKnown RBP4.55□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Adm2Q7TNK8 150 aa4.55□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Vpreb3D3Z6J4 130 aa4.55□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Plac8Q9JI48 112 aa4.55□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Spint4Q9D263 159 aa4.54□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Dnah1E9Q8T7 4250 aa4.54□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Elof1P60003 83 aa4.54□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Cystm1Q8K353 104 aa4.54□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Gm44790A0A0N4SV91 103 aa4.53□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Igkv8-21A0A140T8P7 120 aa4.53□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Wfdc6bF6ULY1 148 aa4.53□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Reg3aO09037 175 aa4.53□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Gm10642Q3TWM1 71 aa4.53□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Sox16Q62247 57 aa4.53□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Igkv3-7A0A0G2JE31 119 aa4.53□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Wfdc3Q14AE4 130 aa4.53□□□□□ -1.68
Col6a6-201ENSMUST00000060896 Sprr2jO70561 109 aa4.52□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Cox6a2P43023 97 aa4.52□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Psors1c2Q80ZC9 134 aa4.52□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Igkv3-4A0A140T8Q4 119 aa4.52□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Gm10267M0QWD8 85 aa4.52□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Gm11627A6PWP4 55 aa4.52□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Gm12353A2AGJ4 60 aa4.51□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Dmac1Q9CQ00 111 aa4.51□□□□□ -1.69
Col6a6-201ENSMUST00000060896 C130032M10RikQ8C888 123 aa4.51□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Igkv8-28A0A0G2JE47 121 aa4.51□□□□□ -1.69
Col6a6-201ENSMUST00000060896 A330070K13RikQ8CA53 115 aa4.51□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Dnah7bL7N1Y0 4068 aa4.51□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Gm28230A0A0A0MQ91 144 aa4.5□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Fam229bQ8CF36 80 aa4.5□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Mrpl34Q99N91 92 aa4.5□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Gm21886J3QJU9 214 aa4.49□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Fras1Q80T14 4010 aa4.49□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Defb39Q70KL3 74 aa4.49□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Gm5617Q91VN2 117 aa4.49□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Dync2h1Q45VK7 4306 aa4.49□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Rpl37aP61514 92 aa4.48□□□□□ -1.69
Col6a6-201ENSMUST00000060896 P84750 121 aa4.48□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Defb13Q8R2I4 64 aa4.47□□□□□ -1.69
Col6a6-201ENSMUST00000060896 1700074P13RikQ9D9G7 251 aa4.47□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Gm17349F7BGH6 99 aa4.47□□□□□ -1.69
Col6a6-201ENSMUST00000060896 CnbpP53996 178 aaKnown RBP4.47□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Q8BT88 171 aa4.47□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Anapc11Q9CPX9 84 aa4.47□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Igkv3-3A0A140T8Q0 119 aa4.46□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Ndufc1Q9CQY9 76 aa4.46□□□□□ -1.69
Col6a6-201ENSMUST00000060896 Gm9507D3Z5T3 223 aa4.46□□□□□ -1.7
Col6a6-201ENSMUST00000060896 UqcrqQ9CQ69 82 aa4.46□□□□□ -1.7
Col6a6-201ENSMUST00000060896 A0A286YE49 62 aa4.46□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Prol1E9PYQ4 312 aa4.44□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Defb11Q8R2I7 77 aa4.44□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Gm10308Q9CVR5 141 aa4.44□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Ighv2-5A0A0A6YY69 116 aa4.43□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Defb9Q8R2I6 67 aa4.43□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Gm10570F6VB42 170 aa4.42□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Znf414Q9DCK4 299 aa4.42□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Tenm2Q9WTS5 2764 aa4.42□□□□□ -1.7
Col6a6-201ENSMUST00000060896 A930002H24RikQ8C8Y3 163 aa4.42□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Igkv8-19A0A0G2JFN8 121 aa4.41□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Ighv2-2A0A075B5P8 116 aa4.41□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Atox1O08997 68 aaKnown RBP4.41□□□□□ -1.7
Col6a6-201ENSMUST00000060896 P01821 116 aa4.41□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Muc6Q80T03 2850 aa4.41□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Dnah7aE9Q0T8 4024 aa4.41□□□□□ -1.7
Col6a6-201ENSMUST00000060896 Krtap10-4Q08EG8 221 aa4.4□□□□□ -1.7
Col6a6-201ENSMUST00000060896 TnxbO35452 4006 aa4.4□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Gm10197F6QEY5 67 aa4.39□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Spaca4Q80ZQ0 127 aa4.39□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Q8K1L6 76 aa4.39□□□□□ -1.71
Col6a6-201ENSMUST00000060896 AI606181Q8C7B9 129 aa4.39□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Gm7276Q3TYW4 209 aa4.38□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Gm10160F6Y577 67 aa4.38□□□□□ -1.71
Col6a6-201ENSMUST00000060896 A730071L15RikQ8C4X0 137 aa4.38□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Coa6Q8BGD8 79 aa4.37□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Dnah14A0A140LIJ4 4489 aa4.37□□□□□ -1.71
Col6a6-201ENSMUST00000060896 RetnlbQ99P86 105 aa4.37□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Gm10643Q3URG9 111 aa4.36□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Znf706Q9D115 76 aaKnown RBP4.36□□□□□ -1.71
Col6a6-201ENSMUST00000060896 1700042G07RikB1AUF7 90 aa4.35□□□□□ -1.71
Col6a6-201ENSMUST00000060896 OxtP35454 125 aa4.35□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Gpr15lA0A0B4J1N3 78 aa4.35□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Gm27235Q3UW50 83 aa4.35□□□□□ -1.71
Col6a6-201ENSMUST00000060896 Sprr1aQ62266 144 aa4.35□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms