RNA–Protein interactions for RNA: ENSMUST00000060516.13

Cd44-202, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 3,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-202ENSMUST00000060516 Igkv8-16A0A0G2JDG9 121 aa3.18□□□□□ -1.9
Cd44-202ENSMUST00000060516 PrcdQ00LT2 53 aa3.18□□□□□ -1.9
Cd44-202ENSMUST00000060516 Reg3dQ9QUS9 175 aa3.18□□□□□ -1.9
Cd44-202ENSMUST00000060516 Igkv8-24A0A140T8P5 121 aa3.18□□□□□ -1.9
Cd44-202ENSMUST00000060516 Gm7138L7N2C3 230 aa3.18□□□□□ -1.9
Cd44-202ENSMUST00000060516 Defb37Q7TMD2 62 aa3.18□□□□□ -1.9
Cd44-202ENSMUST00000060516 Gm37013Q8K491 104 aa3.18□□□□□ -1.9
Cd44-202ENSMUST00000060516 Gm3238W4VSP7 230 aa3.18□□□□□ -1.9
Cd44-202ENSMUST00000060516 Dnah1E9Q8T7 4250 aa3.18□□□□□ -1.9
Cd44-202ENSMUST00000060516 Krtap24-1G3X9A2 248 aa3.17□□□□□ -1.9
Cd44-202ENSMUST00000060516 Igkv3-2A0A075B5P0 119 aa3.17□□□□□ -1.9
Cd44-202ENSMUST00000060516 Igkv3-9A0A140T8P4 119 aa3.17□□□□□ -1.9
Cd44-202ENSMUST00000060516 Cdc42se1Q8BHL7 80 aa3.17□□□□□ -1.9
Cd44-202ENSMUST00000060516 Gm11011D3Z3L9 86 aa3.17□□□□□ -1.9
Cd44-202ENSMUST00000060516 Sprr2jO70561 109 aa3.17□□□□□ -1.9
Cd44-202ENSMUST00000060516 Cd164Q9R0L9 197 aa3.17□□□□□ -1.9
Cd44-202ENSMUST00000060516 Sec61gP60060 68 aa3.16□□□□□ -1.9
Cd44-202ENSMUST00000060516 Defa20Q45VN2 95 aa3.16□□□□□ -1.9
Cd44-202ENSMUST00000060516 Leap2Q91V13 76 aa3.16□□□□□ -1.9
Cd44-202ENSMUST00000060516 Gm5617Q91VN2 117 aa3.16□□□□□ -1.9
Cd44-202ENSMUST00000060516 Dnah3Q8BW94 4083 aa3.16□□□□□ -1.9
Cd44-202ENSMUST00000060516 E130218I03RikA0A0U1RNU5 63 aa3.16□□□□□ -1.9
Cd44-202ENSMUST00000060516 Spint4Q9D263 159 aa3.16□□□□□ -1.9
Cd44-202ENSMUST00000060516 Igkv8-19A0A0G2JFN8 121 aa3.15□□□□□ -1.9
Cd44-202ENSMUST00000060516 Igkv3-10A0A0G2JGN0 119 aa3.15□□□□□ -1.9
Cd44-202ENSMUST00000060516 Smim29Q8R043 75 aa3.15□□□□□ -1.9
Cd44-202ENSMUST00000060516 4933415A04RikQ9D443 101 aa3.15□□□□□ -1.9
Cd44-202ENSMUST00000060516 Dync2h1Q45VK7 4306 aa3.15□□□□□ -1.91
Cd44-202ENSMUST00000060516 A730009L09RikA0A1B0GS82 72 aa3.15□□□□□ -1.91
Cd44-202ENSMUST00000060516 Spink8Q09TK9 105 aa3.15□□□□□ -1.91
Cd44-202ENSMUST00000060516 AI606181Q8C7B9 129 aa3.15□□□□□ -1.91
Cd44-202ENSMUST00000060516 Dad1P61804 113 aa3.14□□□□□ -1.91
Cd44-202ENSMUST00000060516 CrygfQ9CXV3 174 aa3.14□□□□□ -1.91
Cd44-202ENSMUST00000060516 Coa6Q8BGD8 79 aa3.14□□□□□ -1.91
Cd44-202ENSMUST00000060516 Krtap15-1Q9QZU5 150 aa3.14□□□□□ -1.91
Cd44-202ENSMUST00000060516 C130032M10RikQ8C888 123 aa3.14□□□□□ -1.91
Cd44-202ENSMUST00000060516 Sprr4Q8CGN8 76 aa3.14□□□□□ -1.91
Cd44-202ENSMUST00000060516 PrkdcP97313 4128 aa3.13□□□□□ -1.91
Cd44-202ENSMUST00000060516 Ighv8-13A0A075B5Y0 101 aa3.13□□□□□ -1.91
Cd44-202ENSMUST00000060516 D730001G18RikA0A087WQU7 115 aa3.13□□□□□ -1.91
Cd44-202ENSMUST00000060516 Gm17577J3QNF7 156 aa3.13□□□□□ -1.91
Cd44-202ENSMUST00000060516 Cox6a2P43023 97 aa3.13□□□□□ -1.91
Cd44-202ENSMUST00000060516 Prr15lQ8JZM2 100 aa3.13□□□□□ -1.91
Cd44-202ENSMUST00000060516 BC048502Q80Y74 154 aa3.13□□□□□ -1.91
Cd44-202ENSMUST00000060516 A0A286YCN5 57 aa3.12□□□□□ -1.91
Cd44-202ENSMUST00000060516 Snhg11Q4G0K9 87 aa3.12□□□□□ -1.91
Cd44-202ENSMUST00000060516 Mrpl34Q99N91 92 aa3.12□□□□□ -1.91
Cd44-202ENSMUST00000060516 Trav14-1A0A0G2JF94 121 aa3.12□□□□□ -1.91
Cd44-202ENSMUST00000060516 Coa5Q99M07 74 aa3.12□□□□□ -1.91
Cd44-202ENSMUST00000060516 Igkv3-1A0A075B5P1 119 aa3.11□□□□□ -1.91
Cd44-202ENSMUST00000060516 Cox7b2Q9D2H1 82 aa3.11□□□□□ -1.91
Cd44-202ENSMUST00000060516 Tenm1Q9WTS4 2731 aa3.11□□□□□ -1.91
Cd44-202ENSMUST00000060516 Csmd3Q80T79 3707 aa3.11□□□□□ -1.91
Cd44-202ENSMUST00000060516 Igkv3-4A0A140T8Q4 119 aa3.11□□□□□ -1.91
Cd44-202ENSMUST00000060516 Defa28D3Z1V9 94 aa3.1□□□□□ -1.91
Cd44-202ENSMUST00000060516 Krtap3-1A2A591 98 aa3.1□□□□□ -1.91
Cd44-202ENSMUST00000060516 Gm44790A0A0N4SV91 103 aa3.1□□□□□ -1.91
Cd44-202ENSMUST00000060516 Sfta2E9PXB6 77 aa3.1□□□□□ -1.91
Cd44-202ENSMUST00000060516 Gm17349F7BGH6 99 aa3.09□□□□□ -1.91
Cd44-202ENSMUST00000060516 Sprr1aQ62266 144 aa3.09□□□□□ -1.91
Cd44-202ENSMUST00000060516 Cdk2ap2Q9CPY4 127 aa3.09□□□□□ -1.91
Cd44-202ENSMUST00000060516 Dmac1Q9CQ00 111 aa3.09□□□□□ -1.91
Cd44-202ENSMUST00000060516 Igkv1-122A0A140T8M9 119 aa3.09□□□□□ -1.92
Cd44-202ENSMUST00000060516 PscaP57096 123 aa3.09□□□□□ -1.92
Cd44-202ENSMUST00000060516 Srrm2Q8BTI8 2703 aaKnown RBP3.08□□□□□ -1.92
Cd44-202ENSMUST00000060516 HrnrQ8VHD8 2496 aa3.08□□□□□ -1.92
Cd44-202ENSMUST00000060516 Fam104aA2A6P4 185 aa3.08□□□□□ -1.92
Cd44-202ENSMUST00000060516 Camk2n2Q78WH7 79 aa3.08□□□□□ -1.92
Cd44-202ENSMUST00000060516 Stab2Q8R4U0 2559 aa3.08□□□□□ -1.92
Cd44-202ENSMUST00000060516 A0A286YE02 88 aa3.07□□□□□ -1.92
Cd44-202ENSMUST00000060516 ApcQ61315 2845 aa3.07□□□□□ -1.92
Cd44-202ENSMUST00000060516 Dnah17Q69Z23 4481 aa3.07□□□□□ -1.92
Cd44-202ENSMUST00000060516 Gm10160F6Y577 67 aa3.07□□□□□ -1.92
Cd44-202ENSMUST00000060516 Reg3bP35230 175 aa3.07□□□□□ -1.92
Cd44-202ENSMUST00000060516 Vpreb3D3Z6J4 130 aa3.06□□□□□ -1.92
Cd44-202ENSMUST00000060516 Phxr4P15974 95 aa3.06□□□□□ -1.92
Cd44-202ENSMUST00000060516 Dnah11E9Q7N9 4488 aa3.06□□□□□ -1.92
Cd44-202ENSMUST00000060516 Atox1O08997 68 aaKnown RBP3.06□□□□□ -1.92
Cd44-202ENSMUST00000060516 Odf3bQ5M8M2 238 aa3.06□□□□□ -1.92
Cd44-202ENSMUST00000060516 Zcchc13Q9D548 170 aa3.06□□□□□ -1.92
Cd44-202ENSMUST00000060516 Gm11627A6PWP4 55 aa3.05□□□□□ -1.92
Cd44-202ENSMUST00000060516 Defb40Q70KL2 73 aa3.05□□□□□ -1.92
Cd44-202ENSMUST00000060516 Krtap17-1A2A5X6 109 aa3.05□□□□□ -1.92
Cd44-202ENSMUST00000060516 Prol1E9PYQ4 312 aa3.05□□□□□ -1.92
Cd44-202ENSMUST00000060516 Gm2310J3QNJ2 377 aa3.05□□□□□ -1.92
Cd44-202ENSMUST00000060516 Fam168bQ80XQ8 194 aa3.05□□□□□ -1.92
Cd44-202ENSMUST00000060516 U90926O08546 118 aa3.05□□□□□ -1.92
Cd44-202ENSMUST00000060516 Defb12Q8K4N3 78 aa3.04□□□□□ -1.92
Cd44-202ENSMUST00000060516 AplnQ9R0R4 77 aa3.04□□□□□ -1.92
Cd44-202ENSMUST00000060516 Gm12353A2AGJ4 60 aa3.04□□□□□ -1.92
Cd44-202ENSMUST00000060516 Gm21886J3QJU9 214 aa3.04□□□□□ -1.92
Cd44-202ENSMUST00000060516 Sslp1Q3UN54 99 aa3.04□□□□□ -1.92
Cd44-202ENSMUST00000060516 TgO08710 2766 aa3.04□□□□□ -1.92
Cd44-202ENSMUST00000060516 1700018G05RikA0A1B0GSI2 66 aa3.03□□□□□ -1.92
Cd44-202ENSMUST00000060516 Gm17521F6QAC8 156 aa3.03□□□□□ -1.92
Cd44-202ENSMUST00000060516 VwfQ8CIZ8 2813 aa3.03□□□□□ -1.92
Cd44-202ENSMUST00000060516 Igkv3-12A0A140T8P0 119 aa3.03□□□□□ -1.92
Cd44-202ENSMUST00000060516 Gm11562A0PK51 136 aa3.02□□□□□ -1.93
Cd44-202ENSMUST00000060516 A0A286YE49 62 aa3.02□□□□□ -1.93
Cd44-202ENSMUST00000060516 1700042G07RikB1AUF7 90 aa3.02□□□□□ -1.93
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms