RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Dmbt1Q60997 2085 aa4.82□□□□□ -1.64
Clcn3-202ENSMUST00000056508 Rev3lQ61493 3122 aa4.82□□□□□ -1.64
Clcn3-202ENSMUST00000056508 Nav2E9Q842 2432 aa4.82□□□□□ -1.64
Clcn3-202ENSMUST00000056508 Col27a1Q5QNQ9 1845 aa4.81□□□□□ -1.64
Clcn3-202ENSMUST00000056508 TectaO08523 2155 aa4.81□□□□□ -1.64
Clcn3-202ENSMUST00000056508 Wnk1P83741 2377 aa4.8□□□□□ -1.64
Clcn3-202ENSMUST00000056508 Tnp1P10856 55 aa4.79□□□□□ -1.64
Clcn3-202ENSMUST00000056508 Dchs1E9PVD3 3291 aa4.79□□□□□ -1.64
Clcn3-202ENSMUST00000056508 BptfA2A654 3036 aaKnown RBP4.78□□□□□ -1.64
Clcn3-202ENSMUST00000056508 Chd7A2AJK6 2986 aaKnown RBP4.78□□□□□ -1.64
Clcn3-202ENSMUST00000056508 Lelp1Q9DAE3 120 aa4.77□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Gvin1Q80SU7 2427 aa4.77□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Notch2O35516 2470 aa4.77□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Cnot1Q6ZQ08 2375 aaKnown RBP4.75□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Igf2rQ07113 2483 aaKnown RBP4.75□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Ep300B2RWS6 2412 aa4.74□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Tnrc18Q80WC3 2878 aa4.74□□□□□ -1.65
Clcn3-202ENSMUST00000056508 PtprqP0C5E4 2300 aa4.73□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Col4a2P08122 1707 aa4.73□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Gm10139O88245 57 aa4.73□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Gm884A2A9H6 3643 aa4.72□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Flg2Q2VIS4 2362 aa4.72□□□□□ -1.65
Clcn3-202ENSMUST00000056508 FryE9Q8I9 3020 aa4.72□□□□□ -1.65
Clcn3-202ENSMUST00000056508 C2cd3Q52KB6 2323 aa4.71□□□□□ -1.65
Clcn3-202ENSMUST00000056508 Cspg4Q8VHY0 2327 aa4.71□□□□□ -1.65
Clcn3-202ENSMUST00000056508 NbdyA0A0N4SUI7 68 aa4.7□□□□□ -1.66
Clcn3-202ENSMUST00000056508 Bod1lE9Q6J5 3032 aa4.67□□□□□ -1.66
Clcn3-202ENSMUST00000056508 MgaA2AWL7 3003 aaKnown RBP4.67□□□□□ -1.66
Clcn3-202ENSMUST00000056508 Abca2P41234 2434 aa4.67□□□□□ -1.66
Clcn3-202ENSMUST00000056508 Gm16253D3Z167 63 aa4.66□□□□□ -1.66
Clcn3-202ENSMUST00000056508 OtoglF7A4A7 2325 aa4.65□□□□□ -1.66
Clcn3-202ENSMUST00000056508 Dmxl2Q8BPN8 3032 aa4.64□□□□□ -1.67
Clcn3-202ENSMUST00000056508 RelnQ60841 3461 aa4.63□□□□□ -1.67
Clcn3-202ENSMUST00000056508 Myo9aQ8C170 2542 aa4.63□□□□□ -1.67
Clcn3-202ENSMUST00000056508 Bdp1Q571C7 2467 aa4.63□□□□□ -1.67
Clcn3-202ENSMUST00000056508 Wdfy4E9Q2M9 3149 aa4.63□□□□□ -1.67
Clcn3-202ENSMUST00000056508 Sprr1aQ62266 144 aa4.63□□□□□ -1.67
Clcn3-202ENSMUST00000056508 Brwd1Q921C3 2304 aa4.62□□□□□ -1.67
Clcn3-202ENSMUST00000056508 Sec16aA2AIX1 2377 aa4.62□□□□□ -1.67
Clcn3-202ENSMUST00000056508 NbasE9Q411 2356 aa4.61□□□□□ -1.67
Clcn3-202ENSMUST00000056508 BC029722A0A0N4SW31 51 aa4.61□□□□□ -1.67
Clcn3-202ENSMUST00000056508 Spg11Q3UHA3 2430 aa4.6□□□□□ -1.67
Clcn3-202ENSMUST00000056508 Zfp462B1AWL2 2495 aaKnown RBP4.58□□□□□ -1.68
Clcn3-202ENSMUST00000056508 NbeaQ9EPN1 2936 aa4.55□□□□□ -1.68
Clcn3-202ENSMUST00000056508 Piezo2Q8CD54 2822 aa4.55□□□□□ -1.68
Clcn3-202ENSMUST00000056508 Krtap31-1Q9D644 177 aa4.55□□□□□ -1.68
Clcn3-202ENSMUST00000056508 Akap9Q70FJ1 3797 aa4.55□□□□□ -1.68
Clcn3-202ENSMUST00000056508 KalrnA2CG49 2964 aa4.54□□□□□ -1.68
Clcn3-202ENSMUST00000056508 AcacbE9Q4Z2 2448 aa4.54□□□□□ -1.68
Clcn3-202ENSMUST00000056508 Vps13cQ8BX70 3748 aa4.54□□□□□ -1.68
Clcn3-202ENSMUST00000056508 Gm20537G3UYK7 97 aa4.53□□□□□ -1.68
Clcn3-202ENSMUST00000056508 Krtap31-2Q8CAY5 177 aa4.53□□□□□ -1.68
Clcn3-202ENSMUST00000056508 Csmd1Q923L3 3564 aa4.53□□□□□ -1.68
Clcn3-202ENSMUST00000056508 Ankhd1E9PUR0 2548 aaKnown RBP4.52□□□□□ -1.69
Clcn3-202ENSMUST00000056508 Zfyve26Q5DU37 2529 aa4.52□□□□□ -1.69
Clcn3-202ENSMUST00000056508 Celsr3Q91ZI0 3301 aa4.5□□□□□ -1.69
Clcn3-202ENSMUST00000056508 SonQ9QX47 2444 aaKnown RBP4.49□□□□□ -1.69
Clcn3-202ENSMUST00000056508 D6Ertd527eA0A0N4SWI3 464 aa4.48□□□□□ -1.69
Clcn3-202ENSMUST00000056508 Chd8Q09XV5 2582 aaKnown RBP4.47□□□□□ -1.69
Clcn3-202ENSMUST00000056508 Trank1Q8BV79 2999 aa4.47□□□□□ -1.69
Clcn3-202ENSMUST00000056508 Hivep2Q3UHF7 2430 aa4.46□□□□□ -1.69
Clcn3-202ENSMUST00000056508 2310061N02RikQ9D6S9 174 aa4.46□□□□□ -1.7
Clcn3-202ENSMUST00000056508 BC067074F6RXI4 2391 aa4.46□□□□□ -1.7
Clcn3-202ENSMUST00000056508 Zzef1Q5SSH7 2924 aa4.45□□□□□ -1.7
Clcn3-202ENSMUST00000056508 Cep192E9Q4Y4 2514 aaKnown RBP4.44□□□□□ -1.7
Clcn3-202ENSMUST00000056508 Lama5Q61001 3718 aa4.42□□□□□ -1.7
Clcn3-202ENSMUST00000056508 Cmya5Q70KF4 3739 aa4.42□□□□□ -1.7
Clcn3-202ENSMUST00000056508 Lrrk2Q5S006 2527 aa4.41□□□□□ -1.7
Clcn3-202ENSMUST00000056508 Pkd1l2Q7TN88 2461 aa4.36□□□□□ -1.71
Clcn3-202ENSMUST00000056508 Svep1A2AVA0 3567 aa4.35□□□□□ -1.71
Clcn3-202ENSMUST00000056508 Rps29P62274 56 aa4.35□□□□□ -1.71
Clcn3-202ENSMUST00000056508 Smg1Q8BKX6 3658 aaKnown RBP4.35□□□□□ -1.71
Clcn3-202ENSMUST00000056508 Ttc28Q80XJ3 2450 aa4.34□□□□□ -1.72
Clcn3-202ENSMUST00000056508 Muc4Q8JZM8 3443 aa4.32□□□□□ -1.72
Clcn3-202ENSMUST00000056508 Gm9195A0A140LHT4 2805 aa4.32□□□□□ -1.72
Clcn3-202ENSMUST00000056508 DspE9Q557 2883 aaKnown RBP4.31□□□□□ -1.72
Clcn3-202ENSMUST00000056508 Ash1lQ99MY8 2958 aa4.3□□□□□ -1.72
Clcn3-202ENSMUST00000056508 Gm3285A0A1W2P7U0 201 aa4.3□□□□□ -1.72
Clcn3-202ENSMUST00000056508 Adgrg4B7ZCC9 3073 aa4.3□□□□□ -1.72
Clcn3-202ENSMUST00000056508 PolqQ8CGS6 2544 aa4.3□□□□□ -1.72
Clcn3-202ENSMUST00000056508 Col7a1Q63870 2944 aa4.3□□□□□ -1.72
Clcn3-202ENSMUST00000056508 Gm3250E9Q1M3 230 aa4.29□□□□□ -1.72
Clcn3-202ENSMUST00000056508 Piezo1E2JF22 2547 aa4.28□□□□□ -1.72
Clcn3-202ENSMUST00000056508 Ankrd11E9Q4F7 2643 aa4.25□□□□□ -1.73
Clcn3-202ENSMUST00000056508 Usp9yF8VPU6 2556 aa4.25□□□□□ -1.73
Clcn3-202ENSMUST00000056508 2310079G19RikQ9D6L6 185 aa4.21□□□□□ -1.73
Clcn3-202ENSMUST00000056508 Gm9508A0A1W2P7W0 230 aa4.21□□□□□ -1.74
Clcn3-202ENSMUST00000056508 LystP97412 3788 aa4.21□□□□□ -1.74
Clcn3-202ENSMUST00000056508 A0A1Y7VLE6 161 aa4.2□□□□□ -1.74
Clcn3-202ENSMUST00000056508 MtorQ9JLN9 2549 aa4.2□□□□□ -1.74
Clcn3-202ENSMUST00000056508 Kmt2bO08550 2713 aa4.19□□□□□ -1.74
Clcn3-202ENSMUST00000056508 Fbn2Q61555 2907 aa4.19□□□□□ -1.74
Clcn3-202ENSMUST00000056508 Sptbn4E9PX29 2561 aa4.18□□□□□ -1.74
Clcn3-202ENSMUST00000056508 Helz2E9QAM5 2947 aaKnown RBP4.17□□□□□ -1.74
Clcn3-202ENSMUST00000056508 Epg5Q80TA9 2572 aa4.16□□□□□ -1.74
Clcn3-202ENSMUST00000056508 Itpr1P11881 2749 aa4.16□□□□□ -1.74
Clcn3-202ENSMUST00000056508 Mt3P28184 68 aa4.16□□□□□ -1.74
Clcn3-202ENSMUST00000056508 Usp9xP70398 2559 aaKnown RBP4.15□□□□□ -1.74
Clcn3-202ENSMUST00000056508 Hspg2Q05793 3707 aaKnown RBP4.13□□□□□ -1.75
Clcn3-202ENSMUST00000056508 FlnbQ80X90 2602 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 61.3 ms