RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Smim29Q8R043 75 aa14.15□□□□□ -0.14
Ccdc9-201ENSMUST00000041010 Ighv8-13A0A075B5Y0 101 aa14.14□□□□□ -0.15
Ccdc9-201ENSMUST00000041010 Camk2n2Q78WH7 79 aa14.14□□□□□ -0.15
Ccdc9-201ENSMUST00000041010 Igkv3-4A0A140T8Q4 119 aa14.12□□□□□ -0.15
Ccdc9-201ENSMUST00000041010 Atox1O08997 68 aaKnown RBP14.12□□□□□ -0.15
Ccdc9-201ENSMUST00000041010 Gm37013Q8K491 104 aa14.12□□□□□ -0.15
Ccdc9-201ENSMUST00000041010 Sprr4Q8CGN8 76 aa14.1□□□□□ -0.15
Ccdc9-201ENSMUST00000041010 Kmt2aP55200 3966 aa14.1□□□□□ -0.15
Ccdc9-201ENSMUST00000041010 Gm44790A0A0N4SV91 103 aa14.09□□□□□ -0.15
Ccdc9-201ENSMUST00000041010 Gm7137J3QMW1 236 aa14.06□□□□□ -0.16
Ccdc9-201ENSMUST00000041010 Defb40Q70KL2 73 aa14.05□□□□□ -0.16
Ccdc9-201ENSMUST00000041010 Snhg11Q4G0K9 87 aa14.03□□□□□ -0.16
Ccdc9-201ENSMUST00000041010 Igsf10Q3V1M1 2594 aa14□□□□□ -0.17
Ccdc9-201ENSMUST00000041010 PscaP57096 123 aa14□□□□□ -0.17
Ccdc9-201ENSMUST00000041010 Phxr4P15974 95 aa14□□□□□ -0.17
Ccdc9-201ENSMUST00000041010 Gm12353A2AGJ4 60 aa13.98□□□□□ -0.17
Ccdc9-201ENSMUST00000041010 B9d2Q3UK10 175 aa13.98□□□□□ -0.17
Ccdc9-201ENSMUST00000041010 Gm17521F6QAC8 156 aa13.97□□□□□ -0.17
Ccdc9-201ENSMUST00000041010 Dmac1Q9CQ00 111 aa13.97□□□□□ -0.17
Ccdc9-201ENSMUST00000041010 TnxbO35452 4006 aa13.96□□□□□ -0.17
Ccdc9-201ENSMUST00000041010 Dnah6E9Q0B6 4144 aa13.95□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 Vpreb3D3Z6J4 130 aa13.95□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 Notch1Q01705 2531 aa13.94□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 P84750 121 aa13.93□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 VwfQ8CIZ8 2813 aa13.92□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 Dnah3Q8BW94 4083 aa13.92□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 AW011738F6S7Q2 159 aa13.91□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 Reg3bP35230 175 aa13.91□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 A0A286YE49 62 aa13.9□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 Gm4707V9GXN5 68 aa13.9□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 AplnQ9R0R4 77 aa13.9□□□□□ -0.18
Ccdc9-201ENSMUST00000041010 Sslp1Q3UN54 99 aa13.88□□□□□ -0.19
Ccdc9-201ENSMUST00000041010 Gm21886J3QJU9 214 aa13.88□□□□□ -0.19
Ccdc9-201ENSMUST00000041010 Dnah10D3YYQ8 4591 aa13.87□□□□□ -0.19
Ccdc9-201ENSMUST00000041010 1700018G05RikA0A1B0GSI2 66 aa13.86□□□□□ -0.19
Ccdc9-201ENSMUST00000041010 Ccdc179J3QM76 67 aa13.86□□□□□ -0.19
Ccdc9-201ENSMUST00000041010 1700074P13RikQ9D9G7 251 aa13.85□□□□□ -0.19
Ccdc9-201ENSMUST00000041010 Dnah14A0A140LIJ4 4489 aa13.84□□□□□ -0.19
Ccdc9-201ENSMUST00000041010 Gm10160F6Y577 67 aa13.83□□□□□ -0.19
Ccdc9-201ENSMUST00000041010 Fam104aA2A6P4 185 aa13.82□□□□□ -0.2
Ccdc9-201ENSMUST00000041010 Gm11627A6PWP4 55 aa13.8□□□□□ -0.2
Ccdc9-201ENSMUST00000041010 Reg3aO09037 175 aa13.8□□□□□ -0.2
Ccdc9-201ENSMUST00000041010 Zcchc13Q9D548 170 aa13.8□□□□□ -0.2
Ccdc9-201ENSMUST00000041010 Wfdc6bF6ULY1 148 aa13.8□□□□□ -0.2
Ccdc9-201ENSMUST00000041010 Fam168bQ80XQ8 194 aa13.8□□□□□ -0.2
Ccdc9-201ENSMUST00000041010 Ube2bP63147 152 aa13.79□□□□□ -0.2
Ccdc9-201ENSMUST00000041010 U90926O08546 118 aa13.79□□□□□ -0.2
Ccdc9-201ENSMUST00000041010 9230102O04RikA2ASX7 82 aa13.78□□□□□ -0.2
Ccdc9-201ENSMUST00000041010 Ube2aQ9Z255 152 aa13.76□□□□□ -0.21
Ccdc9-201ENSMUST00000041010 Igkv3-12A0A140T8P0 119 aa13.76□□□□□ -0.21
Ccdc9-201ENSMUST00000041010 Prol1E9PYQ4 312 aa13.76□□□□□ -0.21
Ccdc9-201ENSMUST00000041010 Gm10643Q3URG9 111 aa13.76□□□□□ -0.21
Ccdc9-201ENSMUST00000041010 Obox2E9PXV9 151 aa13.75□□□□□ -0.21
Ccdc9-201ENSMUST00000041010 Sprr1aQ62266 144 aa13.74□□□□□ -0.21
Ccdc9-201ENSMUST00000041010 1700042G07RikB1AUF7 90 aa13.74□□□□□ -0.21
Ccdc9-201ENSMUST00000041010 Chtf8P0CG14 533 aa13.72□□□□□ -0.21
Ccdc9-201ENSMUST00000041010 Gm17349F7BGH6 99 aa13.71□□□□□ -0.21
Ccdc9-201ENSMUST00000041010 Dnah17Q69Z23 4481 aa13.71□□□□□ -0.22
Ccdc9-201ENSMUST00000041010 Gm26620Q9CY65 116 aa13.68□□□□□ -0.22
Ccdc9-201ENSMUST00000041010 Rpl37aP61514 92 aa13.66□□□□□ -0.22
Ccdc9-201ENSMUST00000041010 Odf3bQ5M8M2 238 aa13.66□□□□□ -0.22
Ccdc9-201ENSMUST00000041010 Gm28230A0A0A0MQ91 144 aa13.65□□□□□ -0.22
Ccdc9-201ENSMUST00000041010 Chchd10Q7TNL9 138 aa13.63□□□□□ -0.23
Ccdc9-201ENSMUST00000041010 Defb11Q8R2I7 77 aa13.62□□□□□ -0.23
Ccdc9-201ENSMUST00000041010 Gm2310J3QNJ2 377 aa13.61□□□□□ -0.23
Ccdc9-201ENSMUST00000041010 Igkv3-3A0A140T8Q0 119 aa13.59□□□□□ -0.23
Ccdc9-201ENSMUST00000041010 Gm3646F6S692 53 aa13.59□□□□□ -0.23
Ccdc9-201ENSMUST00000041010 Gm16485Q8C4B7 115 aa13.59□□□□□ -0.23
Ccdc9-201ENSMUST00000041010 Dnah1E9Q8T7 4250 aa13.56□□□□□ -0.24
Ccdc9-201ENSMUST00000041010 Gm20604F8WIA3 75 aa13.56□□□□□ -0.24
Ccdc9-201ENSMUST00000041010 SptssbQ925E8 76 aa13.56□□□□□ -0.24
Ccdc9-201ENSMUST00000041010 Wfdc13Q5DQQ6 81 aa13.54□□□□□ -0.24
Ccdc9-201ENSMUST00000041010 Gm10267M0QWD8 85 aa13.53□□□□□ -0.24
Ccdc9-201ENSMUST00000041010 2310061N02RikQ9D6S9 174 aa13.52□□□□□ -0.24
Ccdc9-201ENSMUST00000041010 Gm10139O88245 57 aa13.52□□□□□ -0.25
Ccdc9-201ENSMUST00000041010 Gm20661K7N787 53 aa13.49□□□□□ -0.25
Ccdc9-201ENSMUST00000041010 TgO08710 2766 aa13.48□□□□□ -0.25
Ccdc9-201ENSMUST00000041010 FcgbpE9Q0B5 2583 aa13.48□□□□□ -0.25
Ccdc9-201ENSMUST00000041010 Dync2h1Q45VK7 4306 aa13.48□□□□□ -0.25
Ccdc9-201ENSMUST00000041010 Ndufb1P0DN34 57 aa13.46□□□□□ -0.25
Ccdc9-201ENSMUST00000041010 Phf5aP83870 110 aaKnown RBP13.46□□□□□ -0.25
Ccdc9-201ENSMUST00000041010 Huwe1Q7TMY8 4377 aaKnown RBP13.46□□□□□ -0.26
Ccdc9-201ENSMUST00000041010 Gm10837Q3UTT8 145 aa13.45□□□□□ -0.26
Ccdc9-201ENSMUST00000041010 Gm9508A0A1W2P7W0 230 aa13.43□□□□□ -0.26
Ccdc9-201ENSMUST00000041010 Csmd3Q80T79 3707 aa13.42□□□□□ -0.26
Ccdc9-201ENSMUST00000041010 Dnah7bL7N1Y0 4068 aa13.42□□□□□ -0.26
Ccdc9-201ENSMUST00000041010 Igkv3-7A0A0G2JE31 119 aa13.38□□□□□ -0.27
Ccdc9-201ENSMUST00000041010 Stab2Q8R4U0 2559 aa13.35□□□□□ -0.27
Ccdc9-201ENSMUST00000041010 Plac8Q9JI48 112 aa13.32□□□□□ -0.28
Ccdc9-201ENSMUST00000041010 Pkd1l1Q8R526 2615 aa13.31□□□□□ -0.28
Ccdc9-201ENSMUST00000041010 Defb38Q7TNV7 63 aa13.31□□□□□ -0.28
Ccdc9-201ENSMUST00000041010 Tenm2Q9WTS5 2764 aa13.31□□□□□ -0.28
Ccdc9-201ENSMUST00000041010 Megf8P60882 2789 aa13.3□□□□□ -0.28
Ccdc9-201ENSMUST00000041010 Muc6Q80T03 2850 aa13.28□□□□□ -0.28
Ccdc9-201ENSMUST00000041010 Wfdc10Q3V2J9 124 aa13.25□□□□□ -0.29
Ccdc9-201ENSMUST00000041010 SycnQ8VCK7 134 aa13.24□□□□□ -0.29
Ccdc9-201ENSMUST00000041010 Limd2Q8BGB5 128 aa13.23□□□□□ -0.29
Ccdc9-201ENSMUST00000041010 Fras1Q80T14 4010 aa13.21□□□□□ -0.3
Ccdc9-201ENSMUST00000041010 HrnrQ8VHD8 2496 aa13.19□□□□□ -0.3
Ccdc9-201ENSMUST00000041010 PrkdcP97313 4128 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms