RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Limd2Q8BGB5 128 aa7.89□□□□□ -1.15
Pdlim5-201ENSMUST00000029941 DspE9Q557 2883 aaKnown RBP7.88□□□□□ -1.15
Pdlim5-201ENSMUST00000029941 Chd6A3KFM7 2711 aa7.87□□□□□ -1.15
Pdlim5-201ENSMUST00000029941 Defb9Q8R2I6 67 aa7.87□□□□□ -1.15
Pdlim5-201ENSMUST00000029941 SmcpP15265 143 aa7.87□□□□□ -1.15
Pdlim5-201ENSMUST00000029941 Dchs2A0A0A6YW72 3346 aa7.86□□□□□ -1.15
Pdlim5-201ENSMUST00000029941 NipblQ6KCD5 2798 aaKnown RBP7.84□□□□□ -1.15
Pdlim5-201ENSMUST00000029941 Col6a3E9PWQ3 3284 aa7.84□□□□□ -1.15
Pdlim5-201ENSMUST00000029941 Sprr1aQ62266 144 aa7.84□□□□□ -1.15
Pdlim5-201ENSMUST00000029941 Adgrg4B7ZCC9 3073 aa7.83□□□□□ -1.16
Pdlim5-201ENSMUST00000029941 Usp24B1AY13 2617 aaKnown RBP7.83□□□□□ -1.16
Pdlim5-201ENSMUST00000029941 Myo15aQ9QZZ4 3511 aa7.83□□□□□ -1.16
Pdlim5-201ENSMUST00000029941 Notch2O35516 2470 aa7.82□□□□□ -1.16
Pdlim5-201ENSMUST00000029941 Chtf8P0CG14 533 aa7.81□□□□□ -1.16
Pdlim5-201ENSMUST00000029941 VcanQ62059 3357 aa7.81□□□□□ -1.16
Pdlim5-201ENSMUST00000029941 Gm10999F6Q4M4 69 aa7.81□□□□□ -1.16
Pdlim5-201ENSMUST00000029941 Spaca4Q80ZQ0 127 aa7.78□□□□□ -1.16
Pdlim5-201ENSMUST00000029941 Gpr15lA0A0B4J1N3 78 aa7.78□□□□□ -1.16
Pdlim5-201ENSMUST00000029941 Dchs1E9PVD3 3291 aa7.76□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 Trank1Q8BV79 2999 aa7.76□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 Gm10139O88245 57 aa7.76□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 NbeaQ9EPN1 2936 aa7.75□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 Plac8Q9JI48 112 aa7.75□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 RelnQ60841 3461 aa7.74□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 Utp20Q5XG71 2788 aaKnown RBP7.74□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 Gm7137J3QMW1 236 aa7.73□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 4930507D05RikQ8C9C9 103 aa7.73□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 PolqQ8CGS6 2544 aa7.72□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 Nsd1O88491 2588 aaKnown RBP7.71□□□□□ -1.17
Pdlim5-201ENSMUST00000029941 Anapc11Q9CPX9 84 aa7.71□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 Muc2Q80Z19 2680 aa7.7□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 Uqcr11Q9CPX8 56 aa7.7□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 Cypt15B1AXS0 87 aa7.7□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 Cypt14J3QPF7 87 aa7.69□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 Zfhx3Q61329 3726 aa7.69□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 CicQ924A2 2510 aa7.69□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 Gm10065F6TJM2 114 aa7.69□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 Gm10643Q3URG9 111 aa7.69□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 Q8BGJ3 129 aa7.68□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 Ubr5Q80TP3 2792 aa7.68□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 Gm37013Q8K491 104 aa7.67□□□□□ -1.18
Pdlim5-201ENSMUST00000029941 NbdyA0A0N4SUI7 68 aa7.65□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 AtrQ9JKK8 2635 aa7.64□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 Notch1Q01705 2531 aa7.64□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 Defb1P56386 69 aa7.63□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 Mast4Q811L6 2618 aa7.63□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 Odf3bQ5M8M2 238 aa7.63□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 Gm36176A0A1W2P8D5 158 aa7.63□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 Gm17606F6ZL36 78 aa7.62□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 Gm884A2A9H6 3643 aa7.62□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 6030445D17RikE9Q8F9 148 aa7.62□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 Akap9Q70FJ1 3797 aa7.61□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 SpegQ62407 3262 aa7.6□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 Stab1Q8R4Y4 2571 aa7.59□□□□□ -1.19
Pdlim5-201ENSMUST00000029941 FlncQ8VHX6 2726 aaKnown RBP7.56□□□□□ -1.2
Pdlim5-201ENSMUST00000029941 Tep1P97499 2629 aa7.55□□□□□ -1.2
Pdlim5-201ENSMUST00000029941 Csmd1Q923L3 3564 aa7.52□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 FlnbQ80X90 2602 aaKnown RBP7.52□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 Zfhx4Q9JJN2 3550 aa7.52□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 HrnrQ8VHD8 2496 aa7.52□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 OxtP35454 125 aa7.51□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 RetnlbQ99P86 105 aa7.5□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 Gm9508A0A1W2P7W0 230 aa7.5□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 2310034C09RikQ9D746 214 aa7.5□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 Gm16253D3Z167 63 aa7.5□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 Gm17349F7BGH6 99 aa7.5□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 Gm26620Q9CY65 116 aa7.48□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 SpenQ62504 3644 aaKnown RBP7.48□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 Gm21798J3QNU5 87 aa7.47□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 Gm12216A0A1W2P827 62 aa7.46□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 Krtap29-1A2A5X4 342 aa7.46□□□□□ -1.21
Pdlim5-201ENSMUST00000029941 Kmt2bO08550 2713 aa7.46□□□□□ -1.22
Pdlim5-201ENSMUST00000029941 Gm2310J3QNJ2 377 aa7.44□□□□□ -1.22
Pdlim5-201ENSMUST00000029941 2310061N02RikQ9D6S9 174 aa7.43□□□□□ -1.22
Pdlim5-201ENSMUST00000029941 Fn1P11276 2477 aaKnown RBP7.42□□□□□ -1.22
Pdlim5-201ENSMUST00000029941 4933415A04RikQ9D443 101 aa7.41□□□□□ -1.22
Pdlim5-201ENSMUST00000029941 Smg1Q8BKX6 3658 aaKnown RBP7.41□□□□□ -1.22
Pdlim5-201ENSMUST00000029941 Igfn1Q3KNY0 2849 aa7.41□□□□□ -1.22
Pdlim5-201ENSMUST00000029941 Tenm3Q9WTS6 2715 aa7.39□□□□□ -1.23
Pdlim5-201ENSMUST00000029941 Itpr2Q9Z329 2701 aa7.37□□□□□ -1.23
Pdlim5-201ENSMUST00000029941 Gm3646F6S692 53 aa7.36□□□□□ -1.23
Pdlim5-201ENSMUST00000029941 Lama5Q61001 3718 aa7.36□□□□□ -1.23
Pdlim5-201ENSMUST00000029941 Nf1Q04690 2841 aa7.32□□□□□ -1.24
Pdlim5-201ENSMUST00000029941 Chd9Q8BYH8 2885 aa7.32□□□□□ -1.24
Pdlim5-201ENSMUST00000029941 Celsr2Q9R0M0 2920 aa7.31□□□□□ -1.24
Pdlim5-201ENSMUST00000029941 Akap13E9Q394 2776 aa7.31□□□□□ -1.24
Pdlim5-201ENSMUST00000029941 Gm4491E0CX42 125 aa7.3□□□□□ -1.24
Pdlim5-201ENSMUST00000029941 FasnP19096 2504 aaKnown RBP7.3□□□□□ -1.24
Pdlim5-201ENSMUST00000029941 Hivep1Q03172 2688 aa7.27□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 OtogO55225 2910 aa7.26□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 Rnase13Q5GAM7 153 aa7.25□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 Nbeal2Q6ZQA0 2742 aa7.23□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 Stab2Q8R4U0 2559 aa7.23□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 Gm9507D3Z5T3 223 aa7.23□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 2310050C09RikG5E8Z3 280 aa7.23□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 Col6a5A6H584 2640 aa7.22□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 LrbaQ9ESE1 2856 aa7.22□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 Tex15F8VPN2 2785 aa7.22□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 Krtap14O08640 167 aa7.22□□□□□ -1.25
Pdlim5-201ENSMUST00000029941 TgO08710 2766 aa7.21□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 99.5 ms