RNA–Protein interactions for RNA: ENSMUST00000028224.14

Gapvd1-201, Transcript of GTPase-activating protein and VPS9 domain-containing protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gapvd1, Length 5,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gapvd1-201ENSMUST00000028224 Hectd1Q69ZR2 2618 aaKnown RBP11,2□□□□□ -0,62
Gapvd1-201ENSMUST00000028224 Krtap15-1Q9QZU5 150 aa11,19□□□□□ -0,62
Gapvd1-201ENSMUST00000028224 Gm17349F7BGH6 99 aa11,17□□□□□ -0,62
Gapvd1-201ENSMUST00000028224 Prune2Q52KR3 3084 aa11,17□□□□□ -0,62
Gapvd1-201ENSMUST00000028224 Stab1Q8R4Y4 2571 aa11,13□□□□□ -0,63
Gapvd1-201ENSMUST00000028224 Gm16253D3Z167 63 aa11,11□□□□□ -0,63
Gapvd1-201ENSMUST00000028224 Gm36176A0A1W2P8D5 158 aa11,11□□□□□ -0,63
Gapvd1-201ENSMUST00000028224 Gm37013Q8K491 104 aa11,11□□□□□ -0,63
Gapvd1-201ENSMUST00000028224 A730071L15RikQ8C4X0 137 aa11,1□□□□□ -0,63
Gapvd1-201ENSMUST00000028224 Prrc2cQ3TLH4 2846 aaKnown RBP11,09□□□□□ -0,63
Gapvd1-201ENSMUST00000028224 Akap13E9Q394 2776 aa11,09□□□□□ -0,63
Gapvd1-201ENSMUST00000028224 Kmt2bO08550 2713 aa11,05□□□□□ -0,64
Gapvd1-201ENSMUST00000028224 Cep350E9Q309 3095 aa11,02□□□□□ -0,64
Gapvd1-201ENSMUST00000028224 Jbts17Q8CE72 3214 aa10,99□□□□□ -0,65
Gapvd1-201ENSMUST00000028224 Fam229aB2KGE5 128 aa10,98□□□□□ -0,65
Gapvd1-201ENSMUST00000028224 TrioQ0KL02 3102 aa10,98□□□□□ -0,65
Gapvd1-201ENSMUST00000028224 Camk2n1Q6QWF9 78 aa10,97□□□□□ -0,65
Gapvd1-201ENSMUST00000028224 NipblQ6KCD5 2798 aaKnown RBP10,96□□□□□ -0,65
Gapvd1-201ENSMUST00000028224 Gm3646F6S692 53 aa10,96□□□□□ -0,66
Gapvd1-201ENSMUST00000028224 Mast4Q811L6 2618 aa10,95□□□□□ -0,66
Gapvd1-201ENSMUST00000028224 Krtap29-1A2A5X4 342 aa10,93□□□□□ -0,66
Gapvd1-201ENSMUST00000028224 UtrnE9Q6R7 3430 aa10,91□□□□□ -0,66
Gapvd1-201ENSMUST00000028224 Itpr1P11881 2749 aa10,86□□□□□ -0,67
Gapvd1-201ENSMUST00000028224 Sec61bQ9CQS8 96 aaKnown RBP10,86□□□□□ -0,67
Gapvd1-201ENSMUST00000028224 Gm5767A0A0J9YTU8 78 aa10,84□□□□□ -0,67
Gapvd1-201ENSMUST00000028224 Rpl37Q9D823 97 aa10,82□□□□□ -0,68
Gapvd1-201ENSMUST00000028224 Map1aQ9QYR6 2776 aa10,8□□□□□ -0,68
Gapvd1-201ENSMUST00000028224 Itpr3P70227 2670 aa10,79□□□□□ -0,68
Gapvd1-201ENSMUST00000028224 Krtap13O88375 197 aa10,78□□□□□ -0,68
Gapvd1-201ENSMUST00000028224 2310050C09RikG5E8Z3 280 aa10,78□□□□□ -0,68
Gapvd1-201ENSMUST00000028224 Bod1lE9Q6J5 3032 aa10,77□□□□□ -0,69
Gapvd1-201ENSMUST00000028224 Igsf10Q3V1M1 2594 aa10,77□□□□□ -0,69
Gapvd1-201ENSMUST00000028224 Ubr5Q80TP3 2792 aa10,76□□□□□ -0,69
Gapvd1-201ENSMUST00000028224 Romo1P60603 79 aa10,76□□□□□ -0,69
Gapvd1-201ENSMUST00000028224 Chd6A3KFM7 2711 aa10,75□□□□□ -0,69
Gapvd1-201ENSMUST00000028224 9530053A07RikE9PVG8 2581 aa10,71□□□□□ -0,7
Gapvd1-201ENSMUST00000028224 BC029722A0A0N4SW31 51 aa10,7□□□□□ -0,7
Gapvd1-201ENSMUST00000028224 Tep1P97499 2629 aa10,7□□□□□ -0,7
Gapvd1-201ENSMUST00000028224 Gm9507D3Z5T3 223 aa10,69□□□□□ -0,7
Gapvd1-201ENSMUST00000028224 Gm19426M0QWC7 77 aa10,66□□□□□ -0,7
Gapvd1-201ENSMUST00000028224 Tnrc18Q80WC3 2878 aa10,66□□□□□ -0,7
Gapvd1-201ENSMUST00000028224 Ash1lQ99MY8 2958 aa10,64□□□□□ -0,71
Gapvd1-201ENSMUST00000028224 Gm10382Q3V0T5 144 aa10,63□□□□□ -0,71
Gapvd1-201ENSMUST00000028224 Lama3Q61789 3330 aa10,63□□□□□ -0,71
Gapvd1-201ENSMUST00000028224 4933415A04RikQ9D443 101 aa10,62□□□□□ -0,71
Gapvd1-201ENSMUST00000028224 MgaA2AWL7 3003 aaKnown RBP10,61□□□□□ -0,71
Gapvd1-201ENSMUST00000028224 Stab2Q8R4U0 2559 aa10,6□□□□□ -0,71
Gapvd1-201ENSMUST00000028224 Col12a1Q60847 3120 aa10,6□□□□□ -0,71
Gapvd1-201ENSMUST00000028224 Lama2Q60675 3118 aaKnown RBP10,6□□□□□ -0,71
Gapvd1-201ENSMUST00000028224 Myo15bI7HPW8 3033 aa10,59□□□□□ -0,71
Gapvd1-201ENSMUST00000028224 Krtap14O08640 167 aa10,59□□□□□ -0,71
Gapvd1-201ENSMUST00000028224 Chd7A2AJK6 2986 aaKnown RBP10,58□□□□□ -0,72
Gapvd1-201ENSMUST00000028224 Gm2310J3QNJ2 377 aa10,56□□□□□ -0,72
Gapvd1-201ENSMUST00000028224 Fbn2Q61555 2907 aa10,56□□□□□ -0,72
Gapvd1-201ENSMUST00000028224 Nbeal2Q6ZQA0 2742 aa10,56□□□□□ -0,72
Gapvd1-201ENSMUST00000028224 1700042G07RikB1AUF7 90 aa10,55□□□□□ -0,72
Gapvd1-201ENSMUST00000028224 Krtap10-4Q08EG8 221 aa10,55□□□□□ -0,72
Gapvd1-201ENSMUST00000028224 Dmxl1Q6PNC0 3013 aa10,55□□□□□ -0,72
Gapvd1-201ENSMUST00000028224 Gm7173A0A0G2JEB6 3132 aa10,54□□□□□ -0,72
Gapvd1-201ENSMUST00000028224 2310061N02RikQ9D6S9 174 aa10,53□□□□□ -0,72
Gapvd1-201ENSMUST00000028224 Mki67E9PVX6 3177 aaKnown RBP10,53□□□□□ -0,72
Gapvd1-201ENSMUST00000028224 Pkd1l1Q8R526 2615 aa10,51□□□□□ -0,73
Gapvd1-201ENSMUST00000028224 Rps29P62274 56 aa10,42□□□□□ -0,74
Gapvd1-201ENSMUST00000028224 Krtap10-10A0A1W2P7T6 217 aa10,41□□□□□ -0,74
Gapvd1-201ENSMUST00000028224 Rev3lQ61493 3122 aa10,39□□□□□ -0,75
Gapvd1-201ENSMUST00000028224 Tnp2P11378 117 aa10,38□□□□□ -0,75
Gapvd1-201ENSMUST00000028224 Col6a5A6H584 2640 aa10,37□□□□□ -0,75
Gapvd1-201ENSMUST00000028224 SmcpP15265 143 aa10,37□□□□□ -0,75
Gapvd1-201ENSMUST00000028224 KalrnA2CG49 2964 aa10,37□□□□□ -0,75
Gapvd1-201ENSMUST00000028224 Cox6b2Q80ZN9 88 aa10,36□□□□□ -0,75
Gapvd1-201ENSMUST00000028224 Ranbp2Q9ERU9 3053 aaKnown RBP10,34□□□□□ -0,75
Gapvd1-201ENSMUST00000028224 Muc2Q80Z19 2680 aa10,31□□□□□ -0,76
Gapvd1-201ENSMUST00000028224 HttP42859 3119 aa10,31□□□□□ -0,76
Gapvd1-201ENSMUST00000028224 Hivep1Q03172 2688 aa10,26□□□□□ -0,77
Gapvd1-201ENSMUST00000028224 D6Ertd527eA0A0N4SWI3 464 aa10,21□□□□□ -0,78
Gapvd1-201ENSMUST00000028224 FcgbpE9Q0B5 2583 aa10,2□□□□□ -0,78
Gapvd1-201ENSMUST00000028224 Tex15F8VPN2 2785 aa10,19□□□□□ -0,78
Gapvd1-201ENSMUST00000028224 Cfap54Q8C6S9 3106 aa10,18□□□□□ -0,78
Gapvd1-201ENSMUST00000028224 Celsr1O35161 3034 aa10,14□□□□□ -0,79
Gapvd1-201ENSMUST00000028224 Gm2696A0A1W2P709 240 aa10,13□□□□□ -0,79
Gapvd1-201ENSMUST00000028224 Itpr2Q9Z329 2701 aa10,13□□□□□ -0,79
Gapvd1-201ENSMUST00000028224 Usp34Q6ZQ93 3582 aa10,12□□□□□ -0,79
Gapvd1-201ENSMUST00000028224 TgO08710 2766 aa10,04□□□□□ -0,8
Gapvd1-201ENSMUST00000028224 AspmQ8CJ27 3122 aa10,02□□□□□ -0,81
Gapvd1-201ENSMUST00000028224 Gm21887J3QQ04 176 aa10,02□□□□□ -0,81
Gapvd1-201ENSMUST00000028224 Frem2Q6NVD0 3160 aa10,01□□□□□ -0,81
Gapvd1-201ENSMUST00000028224 Cdh23Q99PF4 3354 aa9,99□□□□□ -0,81
Gapvd1-201ENSMUST00000028224 AtmQ62388 3066 aa9,98□□□□□ -0,81
Gapvd1-201ENSMUST00000028224 Srrm2Q8BTI8 2703 aaKnown RBP9,97□□□□□ -0,81
Gapvd1-201ENSMUST00000028224 BptfA2A654 3036 aaKnown RBP9,95□□□□□ -0,82
Gapvd1-201ENSMUST00000028224 Vps13aQ5H8C4 3166 aa9,95□□□□□ -0,82
Gapvd1-201ENSMUST00000028224 Utp20Q5XG71 2788 aaKnown RBP9,94□□□□□ -0,82
Gapvd1-201ENSMUST00000028224 Gm5965D3Z724 196 aa9,94□□□□□ -0,82
Gapvd1-201ENSMUST00000028224 Ndufaf8A2AMZ4 74 aa9,92□□□□□ -0,82
Gapvd1-201ENSMUST00000028224 Unc80Q8BLN6 3261 aa9,9□□□□□ -0,82
Gapvd1-201ENSMUST00000028224 Igfn1Q3KNY0 2849 aa9,89□□□□□ -0,83
Gapvd1-201ENSMUST00000028224 ApcQ61315 2845 aa9,87□□□□□ -0,83
Gapvd1-201ENSMUST00000028224 2310057N15RikQ9D6T8 200 aa9,84□□□□□ -0,83
Gapvd1-201ENSMUST00000028224 Lrrc37aB1AWG4 3215 aa9,8□□□□□ -0,84
Gapvd1-201ENSMUST00000028224 Adgrg4B7ZCC9 3073 aa9,78□□□□□ -0,84
Retrieved 100 of 22,080 RNA–protein pairs in 34,5 ms