RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Hivep1Q03172 2688 aa12.48□□□□□ -0.41
Tram1-201ENSMUST00000027068 Gm16485Q8C4B7 115 aa12.48□□□□□ -0.41
Tram1-201ENSMUST00000027068 HrnrQ8VHD8 2496 aa12.47□□□□□ -0.41
Tram1-201ENSMUST00000027068 Srrm2Q8BTI8 2703 aaKnown RBP12.47□□□□□ -0.41
Tram1-201ENSMUST00000027068 Phxr5P08399 672 aa12.47□□□□□ -0.41
Tram1-201ENSMUST00000027068 Gm17521F6QAC8 156 aa12.47□□□□□ -0.41
Tram1-201ENSMUST00000027068 Igkv8-19A0A0G2JFN8 121 aa12.46□□□□□ -0.42
Tram1-201ENSMUST00000027068 Dmac1Q9CQ00 111 aa12.45□□□□□ -0.42
Tram1-201ENSMUST00000027068 4933415A04RikQ9D443 101 aa12.45□□□□□ -0.42
Tram1-201ENSMUST00000027068 Nsd1O88491 2588 aaKnown RBP12.45□□□□□ -0.42
Tram1-201ENSMUST00000027068 Atox1O08997 68 aaKnown RBP12.43□□□□□ -0.42
Tram1-201ENSMUST00000027068 Igkv3-4A0A140T8Q4 119 aa12.42□□□□□ -0.42
Tram1-201ENSMUST00000027068 Vpreb3D3Z6J4 130 aa12.42□□□□□ -0.42
Tram1-201ENSMUST00000027068 Igkv3-12A0A140T8P0 119 aa12.41□□□□□ -0.42
Tram1-201ENSMUST00000027068 1700018G05RikA0A1B0GSI2 66 aa12.41□□□□□ -0.42
Tram1-201ENSMUST00000027068 Coa6Q8BGD8 79 aa12.41□□□□□ -0.42
Tram1-201ENSMUST00000027068 Ube2bP63147 152 aa12.41□□□□□ -0.42
Tram1-201ENSMUST00000027068 Obox2E9PXV9 151 aa12.4□□□□□ -0.42
Tram1-201ENSMUST00000027068 Gm7137J3QMW1 236 aa12.4□□□□□ -0.42
Tram1-201ENSMUST00000027068 Kmt2aP55200 3966 aa12.39□□□□□ -0.43
Tram1-201ENSMUST00000027068 Wfdc6bF6ULY1 148 aa12.38□□□□□ -0.43
Tram1-201ENSMUST00000027068 Csmd3Q80T79 3707 aa12.38□□□□□ -0.43
Tram1-201ENSMUST00000027068 Wfdc13Q5DQQ6 81 aa12.36□□□□□ -0.43
Tram1-201ENSMUST00000027068 Gm10837Q3UTT8 145 aa12.35□□□□□ -0.43
Tram1-201ENSMUST00000027068 Gm11627A6PWP4 55 aa12.35□□□□□ -0.43
Tram1-201ENSMUST00000027068 Sslp1Q3UN54 99 aa12.35□□□□□ -0.43
Tram1-201ENSMUST00000027068 Sprr1aQ62266 144 aa12.35□□□□□ -0.43
Tram1-201ENSMUST00000027068 VwfQ8CIZ8 2813 aa12.35□□□□□ -0.43
Tram1-201ENSMUST00000027068 Coa5Q99M07 74 aa12.34□□□□□ -0.43
Tram1-201ENSMUST00000027068 Gm16181B0V2H2 73 aa12.32□□□□□ -0.44
Tram1-201ENSMUST00000027068 Gm21886J3QJU9 214 aa12.32□□□□□ -0.44
Tram1-201ENSMUST00000027068 TgO08710 2766 aa12.31□□□□□ -0.44
Tram1-201ENSMUST00000027068 Dnah7bL7N1Y0 4068 aa12.3□□□□□ -0.44
Tram1-201ENSMUST00000027068 Reg3aO09037 175 aa12.29□□□□□ -0.44
Tram1-201ENSMUST00000027068 OxtP35454 125 aa12.29□□□□□ -0.44
Tram1-201ENSMUST00000027068 Gm36176A0A1W2P8D5 158 aa12.29□□□□□ -0.44
Tram1-201ENSMUST00000027068 Gm10160F6Y577 67 aa12.29□□□□□ -0.44
Tram1-201ENSMUST00000027068 1700042G07RikB1AUF7 90 aa12.28□□□□□ -0.44
Tram1-201ENSMUST00000027068 Sox16Q62247 57 aa12.28□□□□□ -0.44
Tram1-201ENSMUST00000027068 Prol1E9PYQ4 312 aa12.27□□□□□ -0.45
Tram1-201ENSMUST00000027068 Dnah3Q8BW94 4083 aa12.26□□□□□ -0.45
Tram1-201ENSMUST00000027068 Rpl37aP61514 92 aa12.24□□□□□ -0.45
Tram1-201ENSMUST00000027068 Gm37013Q8K491 104 aa12.24□□□□□ -0.45
Tram1-201ENSMUST00000027068 Igkv3-3A0A140T8Q0 119 aa12.23□□□□□ -0.45
Tram1-201ENSMUST00000027068 Gm12353A2AGJ4 60 aa12.21□□□□□ -0.45
Tram1-201ENSMUST00000027068 Gm20604F8WIA3 75 aa12.21□□□□□ -0.46
Tram1-201ENSMUST00000027068 U90926O08546 118 aa12.19□□□□□ -0.46
Tram1-201ENSMUST00000027068 Dnah10D3YYQ8 4591 aa12.18□□□□□ -0.46
Tram1-201ENSMUST00000027068 Gm26620Q9CY65 116 aa12.18□□□□□ -0.46
Tram1-201ENSMUST00000027068 1700074P13RikQ9D9G7 251 aa12.18□□□□□ -0.46
Tram1-201ENSMUST00000027068 A0A286YE49 62 aa12.18□□□□□ -0.46
Tram1-201ENSMUST00000027068 Odf3bQ5M8M2 238 aa12.17□□□□□ -0.46
Tram1-201ENSMUST00000027068 Gm28230A0A0A0MQ91 144 aa12.17□□□□□ -0.46
Tram1-201ENSMUST00000027068 Zcchc13Q9D548 170 aa12.17□□□□□ -0.46
Tram1-201ENSMUST00000027068 Phxr4P15974 95 aa12.14□□□□□ -0.47
Tram1-201ENSMUST00000027068 B9d2Q3UK10 175 aa12.13□□□□□ -0.47
Tram1-201ENSMUST00000027068 Igkv3-7A0A0G2JE31 119 aa12.1□□□□□ -0.47
Tram1-201ENSMUST00000027068 Fn1P11276 2477 aaKnown RBP12.1□□□□□ -0.47
Tram1-201ENSMUST00000027068 SptssbQ925E8 76 aa12.09□□□□□ -0.47
Tram1-201ENSMUST00000027068 Ube2aQ9Z255 152 aa12.09□□□□□ -0.47
Tram1-201ENSMUST00000027068 Dnah14A0A140LIJ4 4489 aa12.09□□□□□ -0.47
Tram1-201ENSMUST00000027068 Gm9508A0A1W2P7W0 230 aa12.08□□□□□ -0.48
Tram1-201ENSMUST00000027068 SycnQ8VCK7 134 aa12.08□□□□□ -0.48
Tram1-201ENSMUST00000027068 Gm3646F6S692 53 aa12.07□□□□□ -0.48
Tram1-201ENSMUST00000027068 Phf5aP83870 110 aaKnown RBP12.06□□□□□ -0.48
Tram1-201ENSMUST00000027068 Gm10267M0QWD8 85 aa12.05□□□□□ -0.48
Tram1-201ENSMUST00000027068 Gm10139O88245 57 aa12.04□□□□□ -0.48
Tram1-201ENSMUST00000027068 Megf8P60882 2789 aa12.03□□□□□ -0.48
Tram1-201ENSMUST00000027068 Dnah1E9Q8T7 4250 aa12.03□□□□□ -0.48
Tram1-201ENSMUST00000027068 FasnP19096 2504 aaKnown RBP12.02□□□□□ -0.48
Tram1-201ENSMUST00000027068 9530053A07RikE9PVG8 2581 aa12.02□□□□□ -0.49
Tram1-201ENSMUST00000027068 Chtf8P0CG14 533 aa12.01□□□□□ -0.49
Tram1-201ENSMUST00000027068 Defb38Q7TNV7 63 aa11.99□□□□□ -0.49
Tram1-201ENSMUST00000027068 Chchd10Q7TNL9 138 aa11.97□□□□□ -0.49
Tram1-201ENSMUST00000027068 Dnah17Q69Z23 4481 aa11.94□□□□□ -0.5
Tram1-201ENSMUST00000027068 Wfdc10Q3V2J9 124 aa11.94□□□□□ -0.5
Tram1-201ENSMUST00000027068 Stab2Q8R4U0 2559 aa11.93□□□□□ -0.5
Tram1-201ENSMUST00000027068 Spata3Q9D9T6 193 aa11.93□□□□□ -0.5
Tram1-201ENSMUST00000027068 Gm10643Q3URG9 111 aa11.92□□□□□ -0.5
Tram1-201ENSMUST00000027068 2310061N02RikQ9D6S9 174 aa11.92□□□□□ -0.5
Tram1-201ENSMUST00000027068 Dnah6E9Q0B6 4144 aa11.91□□□□□ -0.5
Tram1-201ENSMUST00000027068 Gm2310J3QNJ2 377 aa11.9□□□□□ -0.5
Tram1-201ENSMUST00000027068 Wfdc17Q5SSJ1 76 aa11.9□□□□□ -0.5
Tram1-201ENSMUST00000027068 Muc6Q80T03 2850 aa11.9□□□□□ -0.5
Tram1-201ENSMUST00000027068 Dnah11E9Q7N9 4488 aa11.89□□□□□ -0.51
Tram1-201ENSMUST00000027068 Igkv3-5A0A140T8M6 119 aa11.88□□□□□ -0.51
Tram1-201ENSMUST00000027068 Tenm2Q9WTS5 2764 aa11.88□□□□□ -0.51
Tram1-201ENSMUST00000027068 Defb9Q8R2I6 67 aa11.87□□□□□ -0.51
Tram1-201ENSMUST00000027068 Gm9821Q8K076 103 aa11.86□□□□□ -0.51
Tram1-201ENSMUST00000027068 Igsf10Q3V1M1 2594 aa11.85□□□□□ -0.51
Tram1-201ENSMUST00000027068 Gm10642Q3TWM1 71 aa11.82□□□□□ -0.52
Tram1-201ENSMUST00000027068 Ndufs5Q99LY9 106 aa11.81□□□□□ -0.52
Tram1-201ENSMUST00000027068 1700012A03RikQ9DAF1 130 aa11.8□□□□□ -0.52
Tram1-201ENSMUST00000027068 6030445D17RikE9Q8F9 148 aa11.79□□□□□ -0.52
Tram1-201ENSMUST00000027068 Pkd1l1Q8R526 2615 aa11.78□□□□□ -0.52
Tram1-201ENSMUST00000027068 Gm20661K7N787 53 aa11.77□□□□□ -0.52
Tram1-201ENSMUST00000027068 Dnah9B1AR51 4484 aa11.77□□□□□ -0.53
Tram1-201ENSMUST00000027068 Nupr2Q497P3 102 aa11.76□□□□□ -0.53
Tram1-201ENSMUST00000027068 Plac8Q9JI48 112 aa11.74□□□□□ -0.53
Tram1-201ENSMUST00000027068 Anapc11Q9CPX9 84 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms