RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Igkv3-12A0A140T8P0 119 aa11.34□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 Myo18bE9PV66 2605 aa11.34□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 Obox2E9PXV9 151 aa11.34□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 B9d2Q3UK10 175 aa11.33□□□□□ -0.59
Sqstm1-201ENSMUST00000015981 Zcchc13Q9D548 170 aa11.33□□□□□ -0.6
Sqstm1-201ENSMUST00000015981 Prol1E9PYQ4 312 aa11.31□□□□□ -0.6
Sqstm1-201ENSMUST00000015981 Sprr1aQ62266 144 aa11.3□□□□□ -0.6
Sqstm1-201ENSMUST00000015981 Nbeal2Q6ZQA0 2742 aa11.29□□□□□ -0.6
Sqstm1-201ENSMUST00000015981 Gm3233E9Q2H5 230 aa11.29□□□□□ -0.6
Sqstm1-201ENSMUST00000015981 PolqQ8CGS6 2544 aa11.28□□□□□ -0.6
Sqstm1-201ENSMUST00000015981 AplnQ9R0R4 77 aa11.27□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 9230102O04RikA2ASX7 82 aa11.26□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 U90926O08546 118 aa11.26□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 Fam104aA2A6P4 185 aa11.25□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 Chtf8P0CG14 533 aa11.25□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 Rpl37aP61514 92 aa11.25□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 Gm16485Q8C4B7 115 aa11.25□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 Erdr1J3QMM0 206 aa11.24□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 Gm28230A0A0A0MQ91 144 aa11.23□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 Odf3bQ5M8M2 238 aa11.22□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 Wfdc13Q5DQQ6 81 aa11.21□□□□□ -0.61
Sqstm1-201ENSMUST00000015981 Ube2aQ9Z255 152 aa11.21□□□□□ -0.62
Sqstm1-201ENSMUST00000015981 PtprqP0C5E4 2300 aa11.2□□□□□ -0.62
Sqstm1-201ENSMUST00000015981 Gm10160F6Y577 67 aa11.18□□□□□ -0.62
Sqstm1-201ENSMUST00000015981 Ccdc179J3QM76 67 aa11.18□□□□□ -0.62
Sqstm1-201ENSMUST00000015981 Chchd10Q7TNL9 138 aa11.17□□□□□ -0.62
Sqstm1-201ENSMUST00000015981 Gm10643Q3URG9 111 aa11.15□□□□□ -0.62
Sqstm1-201ENSMUST00000015981 1700042G07RikB1AUF7 90 aa11.15□□□□□ -0.62
Sqstm1-201ENSMUST00000015981 Gm10267M0QWD8 85 aa11.15□□□□□ -0.62
Sqstm1-201ENSMUST00000015981 TgO08710 2766 aa11.14□□□□□ -0.63
Sqstm1-201ENSMUST00000015981 Gm2310J3QNJ2 377 aa11.13□□□□□ -0.63
Sqstm1-201ENSMUST00000015981 Gm26620Q9CY65 116 aa11.12□□□□□ -0.63
Sqstm1-201ENSMUST00000015981 Notch2O35516 2470 aa11.11□□□□□ -0.63
Sqstm1-201ENSMUST00000015981 Tenm1Q9WTS4 2731 aa11.11□□□□□ -0.63
Sqstm1-201ENSMUST00000015981 Gm10139O88245 57 aa11.1□□□□□ -0.63
Sqstm1-201ENSMUST00000015981 SptssbQ925E8 76 aa11.1□□□□□ -0.63
Sqstm1-201ENSMUST00000015981 Igkv3-3A0A140T8Q0 119 aa11.09□□□□□ -0.63
Sqstm1-201ENSMUST00000015981 Gm20604F8WIA3 75 aa11.09□□□□□ -0.63
Sqstm1-201ENSMUST00000015981 Gm3646F6S692 53 aa11.07□□□□□ -0.64
Sqstm1-201ENSMUST00000015981 Igkv3-7A0A0G2JE31 119 aa11.05□□□□□ -0.64
Sqstm1-201ENSMUST00000015981 HrnrQ8VHD8 2496 aa11.05□□□□□ -0.64
Sqstm1-201ENSMUST00000015981 Csmd3Q80T79 3707 aa11.04□□□□□ -0.64
Sqstm1-201ENSMUST00000015981 Gm20661K7N787 53 aa11.04□□□□□ -0.64
Sqstm1-201ENSMUST00000015981 CicQ924A2 2510 aa11.04□□□□□ -0.64
Sqstm1-201ENSMUST00000015981 Notch1Q01705 2531 aa11.02□□□□□ -0.65
Sqstm1-201ENSMUST00000015981 Fbn1Q61554 2873 aaKnown RBP11.02□□□□□ -0.65
Sqstm1-201ENSMUST00000015981 Defb38Q7TNV7 63 aa11.01□□□□□ -0.65
Sqstm1-201ENSMUST00000015981 AtrQ9JKK8 2635 aa11□□□□□ -0.65
Sqstm1-201ENSMUST00000015981 Kmt2aP55200 3966 aa11□□□□□ -0.65
Sqstm1-201ENSMUST00000015981 Tenm4Q3UHK6 2771 aa10.99□□□□□ -0.65
Sqstm1-201ENSMUST00000015981 Ndufb1P0DN34 57 aa10.98□□□□□ -0.65
Sqstm1-201ENSMUST00000015981 Gm10837Q3UTT8 145 aa10.95□□□□□ -0.66
Sqstm1-201ENSMUST00000015981 Dnah3Q8BW94 4083 aa10.95□□□□□ -0.66
Sqstm1-201ENSMUST00000015981 SycnQ8VCK7 134 aa10.94□□□□□ -0.66
Sqstm1-201ENSMUST00000015981 Gm7138L7N2C3 230 aa10.93□□□□□ -0.66
Sqstm1-201ENSMUST00000015981 Gm3238W4VSP7 230 aa10.93□□□□□ -0.66
Sqstm1-201ENSMUST00000015981 Wfdc10Q3V2J9 124 aa10.93□□□□□ -0.66
Sqstm1-201ENSMUST00000015981 Phf5aP83870 110 aaKnown RBP10.92□□□□□ -0.66
Sqstm1-201ENSMUST00000015981 Col6a5A6H584 2640 aa10.9□□□□□ -0.66
Sqstm1-201ENSMUST00000015981 Itpr2Q9Z329 2701 aa10.89□□□□□ -0.67
Sqstm1-201ENSMUST00000015981 Dnah7bL7N1Y0 4068 aa10.87□□□□□ -0.67
Sqstm1-201ENSMUST00000015981 Spata3Q9D9T6 193 aa10.87□□□□□ -0.67
Sqstm1-201ENSMUST00000015981 Tenm2Q9WTS5 2764 aa10.86□□□□□ -0.67
Sqstm1-201ENSMUST00000015981 FlnbQ80X90 2602 aaKnown RBP10.86□□□□□ -0.67
Sqstm1-201ENSMUST00000015981 Sslp1Q3UN54 99 aa10.86□□□□□ -0.67
Sqstm1-201ENSMUST00000015981 Dnah1E9Q8T7 4250 aa10.85□□□□□ -0.67
Sqstm1-201ENSMUST00000015981 Igkv3-5A0A140T8M6 119 aa10.84□□□□□ -0.67
Sqstm1-201ENSMUST00000015981 Plac8Q9JI48 112 aa10.83□□□□□ -0.68
Sqstm1-201ENSMUST00000015981 Nsd1O88491 2588 aaKnown RBP10.82□□□□□ -0.68
Sqstm1-201ENSMUST00000015981 Srrm2Q8BTI8 2703 aaKnown RBP10.81□□□□□ -0.68
Sqstm1-201ENSMUST00000015981 Limd2Q8BGB5 128 aa10.79□□□□□ -0.68
Sqstm1-201ENSMUST00000015981 VwfQ8CIZ8 2813 aa10.75□□□□□ -0.69
Sqstm1-201ENSMUST00000015981 Gm27235Q3UW50 83 aa10.74□□□□□ -0.69
Sqstm1-201ENSMUST00000015981 Uqcr11Q9CPX8 56 aa10.74□□□□□ -0.69
Sqstm1-201ENSMUST00000015981 Hivep1Q03172 2688 aa10.73□□□□□ -0.69
Sqstm1-201ENSMUST00000015981 Megf8P60882 2789 aa10.73□□□□□ -0.69
Sqstm1-201ENSMUST00000015981 Stab1Q8R4Y4 2571 aa10.72□□□□□ -0.69
Sqstm1-201ENSMUST00000015981 Defb9Q8R2I6 67 aa10.72□□□□□ -0.69
Sqstm1-201ENSMUST00000015981 Dnah11E9Q7N9 4488 aa10.72□□□□□ -0.69
Sqstm1-201ENSMUST00000015981 Gm21798J3QNU5 87 aa10.71□□□□□ -0.69
Sqstm1-201ENSMUST00000015981 6030445D17RikE9Q8F9 148 aa10.71□□□□□ -0.69
Sqstm1-201ENSMUST00000015981 9530053A07RikE9PVG8 2581 aa10.71□□□□□ -0.7
Sqstm1-201ENSMUST00000015981 Ndufs5Q99LY9 106 aa10.71□□□□□ -0.7
Sqstm1-201ENSMUST00000015981 Q8K1L6 76 aa10.7□□□□□ -0.7
Sqstm1-201ENSMUST00000015981 Dnah17Q69Z23 4481 aa10.69□□□□□ -0.7
Sqstm1-201ENSMUST00000015981 OxtP35454 125 aa10.67□□□□□ -0.7
Sqstm1-201ENSMUST00000015981 2310061N02RikQ9D6S9 174 aa10.67□□□□□ -0.7
Sqstm1-201ENSMUST00000015981 Gm10642Q3TWM1 71 aa10.66□□□□□ -0.7
Sqstm1-201ENSMUST00000015981 FasnP19096 2504 aaKnown RBP10.65□□□□□ -0.7
Sqstm1-201ENSMUST00000015981 Gm9821Q8K076 103 aa10.64□□□□□ -0.71
Sqstm1-201ENSMUST00000015981 Dnah14A0A140LIJ4 4489 aa10.63□□□□□ -0.71
Sqstm1-201ENSMUST00000015981 Dnah10D3YYQ8 4591 aa10.63□□□□□ -0.71
Sqstm1-201ENSMUST00000015981 Gm7137J3QMW1 236 aa10.61□□□□□ -0.71
Sqstm1-201ENSMUST00000015981 1700012A03RikQ9DAF1 130 aa10.61□□□□□ -0.71
Sqstm1-201ENSMUST00000015981 Gm36176A0A1W2P8D5 158 aa10.58□□□□□ -0.72
Sqstm1-201ENSMUST00000015981 Gm16253D3Z167 63 aa10.57□□□□□ -0.72
Sqstm1-201ENSMUST00000015981 Fn1P11276 2477 aaKnown RBP10.57□□□□□ -0.72
Sqstm1-201ENSMUST00000015981 Gm9508A0A1W2P7W0 230 aa10.54□□□□□ -0.72
Sqstm1-201ENSMUST00000015981 Cypt14J3QPF7 87 aa10.53□□□□□ -0.72
Sqstm1-201ENSMUST00000015981 Gm4707V9GXN5 68 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms