RNA–Protein interactions for RNA: ENSMUST00000176216.8

Cux1-207, Transcript of Homeobox protein cut-like 1, mousemouse

TSL 1 (best) BASIC

Gene Cux1, Length 2,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-207ENSMUST00000176216 Hivep1Q03172 2688 aa6.91□□□□□ -1.3
Cux1-207ENSMUST00000176216 Igkv1-110A0A0B4J1I0 119 aa6.91□□□□□ -1.3
Cux1-207ENSMUST00000176216 Smim29Q8R043 75 aa6.91□□□□□ -1.3
Cux1-207ENSMUST00000176216 Col6a5A6H584 2640 aa6.9□□□□□ -1.3
Cux1-207ENSMUST00000176216 Klk9Q32M27 251 aa6.9□□□□□ -1.3
Cux1-207ENSMUST00000176216 B230307C23RikQ8BLB2 64 aa6.9□□□□□ -1.31
Cux1-207ENSMUST00000176216 Cd164Q9R0L9 197 aa6.9□□□□□ -1.31
Cux1-207ENSMUST00000176216 Ighv8-13A0A075B5Y0 101 aa6.89□□□□□ -1.31
Cux1-207ENSMUST00000176216 Gm17577J3QNF7 156 aa6.88□□□□□ -1.31
Cux1-207ENSMUST00000176216 FlnbQ80X90 2602 aaKnown RBP6.88□□□□□ -1.31
Cux1-207ENSMUST00000176216 Tcl1b5P56845 121 aa6.88□□□□□ -1.31
Cux1-207ENSMUST00000176216 A830005F24RikQ8BRT5 167 aa6.88□□□□□ -1.31
Cux1-207ENSMUST00000176216 Kmt2aP55200 3966 aa6.88□□□□□ -1.31
Cux1-207ENSMUST00000176216 Inafm2A0A1L1STD6 152 aa6.87□□□□□ -1.31
Cux1-207ENSMUST00000176216 Gm17509Q9CZ61 145 aa6.87□□□□□ -1.31
Cux1-207ENSMUST00000176216 Rbm3O89086 153 aaKnown RBP6.87□□□□□ -1.31
Cux1-207ENSMUST00000176216 Srrm2Q8BTI8 2703 aaKnown RBP6.87□□□□□ -1.31
Cux1-207ENSMUST00000176216 Igkv8-34A0A0G2JDU0 121 aa6.86□□□□□ -1.31
Cux1-207ENSMUST00000176216 Tmem258P61166 79 aa6.86□□□□□ -1.31
Cux1-207ENSMUST00000176216 Reg3bP35230 175 aa6.86□□□□□ -1.31
Cux1-207ENSMUST00000176216 Cmc4Q61908 68 aa6.86□□□□□ -1.31
Cux1-207ENSMUST00000176216 Igkv8-28A0A0G2JE47 121 aa6.86□□□□□ -1.31
Cux1-207ENSMUST00000176216 E130114P18RikF6S0S7 154 aa6.86□□□□□ -1.31
Cux1-207ENSMUST00000176216 BikO70337 150 aa6.86□□□□□ -1.31
Cux1-207ENSMUST00000176216 GhrhP16043 103 aa6.86□□□□□ -1.31
Cux1-207ENSMUST00000176216 Cox7b2Q9D2H1 82 aa6.86□□□□□ -1.31
Cux1-207ENSMUST00000176216 Ighv2-5A0A0A6YY69 116 aa6.85□□□□□ -1.31
Cux1-207ENSMUST00000176216 Igkv4-92A0A0B4J1I2 117 aa6.85□□□□□ -1.31
Cux1-207ENSMUST00000176216 Igkv1-122A0A140T8M9 119 aa6.85□□□□□ -1.31
Cux1-207ENSMUST00000176216 9430015G10RikA2ASP7 199 aa6.84□□□□□ -1.31
Cux1-207ENSMUST00000176216 Elof1P60003 83 aa6.84□□□□□ -1.31
Cux1-207ENSMUST00000176216 Camk2n2Q78WH7 79 aa6.83□□□□□ -1.32
Cux1-207ENSMUST00000176216 A330070K13RikQ8CA53 115 aa6.83□□□□□ -1.32
Cux1-207ENSMUST00000176216 SnurfQ9WU12 71 aa6.83□□□□□ -1.32
Cux1-207ENSMUST00000176216 Rps28P62858 69 aaKnown RBP6.83□□□□□ -1.32
Cux1-207ENSMUST00000176216 Gm19935A0A1B0GSF9 52 aa6.82□□□□□ -1.32
Cux1-207ENSMUST00000176216 Sprr4Q8CGN8 76 aa6.82□□□□□ -1.32
Cux1-207ENSMUST00000176216 Dnah7bL7N1Y0 4068 aa6.82□□□□□ -1.32
Cux1-207ENSMUST00000176216 Vpreb2P13373 142 aa6.81□□□□□ -1.32
Cux1-207ENSMUST00000176216 Brk1Q91VR8 75 aa6.81□□□□□ -1.32
Cux1-207ENSMUST00000176216 A0A286YE02 88 aa6.81□□□□□ -1.32
Cux1-207ENSMUST00000176216 Cdk2ap2Q9CPY4 127 aa6.81□□□□□ -1.32
Cux1-207ENSMUST00000176216 VwfQ8CIZ8 2813 aa6.81□□□□□ -1.32
Cux1-207ENSMUST00000176216 Samd13D3YUG0 102 aa6.8□□□□□ -1.32
Cux1-207ENSMUST00000176216 Nsd1O88491 2588 aaKnown RBP6.8□□□□□ -1.32
Cux1-207ENSMUST00000176216 Dnah3Q8BW94 4083 aa6.8□□□□□ -1.32
Cux1-207ENSMUST00000176216 Igkv3-2A0A075B5P0 119 aa6.8□□□□□ -1.32
Cux1-207ENSMUST00000176216 Pou2af1Q64693 256 aa6.8□□□□□ -1.32
Cux1-207ENSMUST00000176216 Csmd3Q80T79 3707 aa6.8□□□□□ -1.32
Cux1-207ENSMUST00000176216 Trav14-1A0A0G2JF94 121 aa6.79□□□□□ -1.32
Cux1-207ENSMUST00000176216 Dnah10D3YYQ8 4591 aa6.79□□□□□ -1.32
Cux1-207ENSMUST00000176216 Gm7137J3QMW1 236 aa6.79□□□□□ -1.32
Cux1-207ENSMUST00000176216 Phxr5P08399 672 aa6.79□□□□□ -1.32
Cux1-207ENSMUST00000176216 BC048502Q80Y74 154 aa6.78□□□□□ -1.32
Cux1-207ENSMUST00000176216 Fam19a5Q91WE9 132 aa6.78□□□□□ -1.32
Cux1-207ENSMUST00000176216 Pde6gP09174 87 aa6.77□□□□□ -1.33
Cux1-207ENSMUST00000176216 AplnQ9R0R4 77 aa6.77□□□□□ -1.33
Cux1-207ENSMUST00000176216 Ighv2-2A0A075B5P8 116 aa6.77□□□□□ -1.33
Cux1-207ENSMUST00000176216 Sfta2E9PXB6 77 aa6.77□□□□□ -1.33
Cux1-207ENSMUST00000176216 P01821 116 aa6.77□□□□□ -1.33
Cux1-207ENSMUST00000176216 Fam168bQ80XQ8 194 aa6.77□□□□□ -1.33
Cux1-207ENSMUST00000176216 HrnrQ8VHD8 2496 aa6.76□□□□□ -1.33
Cux1-207ENSMUST00000176216 Smlr1J3QMJ4 66 aa6.76□□□□□ -1.33
Cux1-207ENSMUST00000176216 Gm11011D3Z3L9 86 aa6.75□□□□□ -1.33
Cux1-207ENSMUST00000176216 Gm36176A0A1W2P8D5 158 aa6.75□□□□□ -1.33
Cux1-207ENSMUST00000176216 Defa27F2Z403 93 aa6.74□□□□□ -1.33
Cux1-207ENSMUST00000176216 Gm7276Q3TYW4 209 aa6.74□□□□□ -1.33
Cux1-207ENSMUST00000176216 Prr15lQ8JZM2 100 aa6.74□□□□□ -1.33
Cux1-207ENSMUST00000176216 Ndufc1Q9CQY9 76 aa6.74□□□□□ -1.33
Cux1-207ENSMUST00000176216 Gm5617Q91VN2 117 aa6.72□□□□□ -1.33
Cux1-207ENSMUST00000176216 Sprr2jO70561 109 aa6.72□□□□□ -1.33
Cux1-207ENSMUST00000176216 P06320 134 aa6.72□□□□□ -1.33
Cux1-207ENSMUST00000176216 Gm16485Q8C4B7 115 aa6.72□□□□□ -1.33
Cux1-207ENSMUST00000176216 C130032M10RikQ8C888 123 aa6.72□□□□□ -1.33
Cux1-207ENSMUST00000176216 P84750 121 aa6.71□□□□□ -1.34
Cux1-207ENSMUST00000176216 Fn1P11276 2477 aaKnown RBP6.71□□□□□ -1.34
Cux1-207ENSMUST00000176216 Cox6a2P43023 97 aa6.71□□□□□ -1.34
Cux1-207ENSMUST00000176216 Defb40Q70KL2 73 aa6.71□□□□□ -1.34
Cux1-207ENSMUST00000176216 Q8BT88 171 aa6.7□□□□□ -1.34
Cux1-207ENSMUST00000176216 TgO08710 2766 aa6.7□□□□□ -1.34
Cux1-207ENSMUST00000176216 Dnah14A0A140LIJ4 4489 aa6.69□□□□□ -1.34
Cux1-207ENSMUST00000176216 6430550D23RikE9Q1X6 194 aa6.69□□□□□ -1.34
Cux1-207ENSMUST00000176216 PscaP57096 123 aa6.69□□□□□ -1.34
Cux1-207ENSMUST00000176216 9530053A07RikE9PVG8 2581 aa6.68□□□□□ -1.34
Cux1-207ENSMUST00000176216 Gm44790A0A0N4SV91 103 aa6.68□□□□□ -1.34
Cux1-207ENSMUST00000176216 Vpreb1P13372 142 aa6.68□□□□□ -1.34
Cux1-207ENSMUST00000176216 Spink8Q09TK9 105 aa6.68□□□□□ -1.34
Cux1-207ENSMUST00000176216 Dmac1Q9CQ00 111 aa6.67□□□□□ -1.34
Cux1-207ENSMUST00000176216 Sprr1aQ62266 144 aa6.67□□□□□ -1.34
Cux1-207ENSMUST00000176216 Mrpl34Q99N91 92 aa6.67□□□□□ -1.34
Cux1-207ENSMUST00000176216 Serp1Q9Z1W5 66 aa6.67□□□□□ -1.34
Cux1-207ENSMUST00000176216 Gm10570F6VB42 170 aa6.66□□□□□ -1.34
Cux1-207ENSMUST00000176216 Sslp1Q3UN54 99 aa6.66□□□□□ -1.34
Cux1-207ENSMUST00000176216 H2al1aQ5M8Q2 105 aa6.66□□□□□ -1.34
Cux1-207ENSMUST00000176216 Dnah6E9Q0B6 4144 aa6.66□□□□□ -1.34
Cux1-207ENSMUST00000176216 Gm37389A0A0A6YW05 95 aa6.65□□□□□ -1.34
Cux1-207ENSMUST00000176216 Gm10401E9Q3K6 71 aa6.65□□□□□ -1.34
Cux1-207ENSMUST00000176216 Pet100P0DJE0 76 aa6.65□□□□□ -1.34
Cux1-207ENSMUST00000176216 Igkv3-12A0A140T8P0 119 aa6.65□□□□□ -1.35
Cux1-207ENSMUST00000176216 Gm16181B0V2H2 73 aa6.65□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms