RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Smim13E9Q942 88 aa12.4□□□□□ -0.42
Lig3-209ENSMUST00000173009 Wdr38Q9D994 303 aa12.4□□□□□ -0.42
Lig3-209ENSMUST00000173009 Ly6hQ9WUC3 139 aa12.4□□□□□ -0.42
Lig3-209ENSMUST00000173009 NbdyA0A0N4SUI7 68 aa12.39□□□□□ -0.43
Lig3-209ENSMUST00000173009 P01819 144 aa12.39□□□□□ -0.43
Lig3-209ENSMUST00000173009 Tnp2P11378 117 aa12.38□□□□□ -0.43
Lig3-209ENSMUST00000173009 Gm10549Q3URY4 149 aa12.38□□□□□ -0.43
Lig3-209ENSMUST00000173009 Dmac1Q9CQ00 111 aa12.38□□□□□ -0.43
Lig3-209ENSMUST00000173009 Eif4ebp3Q80VV3 101 aa12.37□□□□□ -0.43
Lig3-209ENSMUST00000173009 S100a8P27005 89 aa12.36□□□□□ -0.43
Lig3-209ENSMUST00000173009 SelenowP63300 88 aa12.36□□□□□ -0.43
Lig3-209ENSMUST00000173009 Defa22Q8C1N8 93 aa12.36□□□□□ -0.43
Lig3-209ENSMUST00000173009 Spata45Q9CVW4 97 aa12.36□□□□□ -0.43
Lig3-209ENSMUST00000173009 Rab37Q9JKM7 223 aa12.35□□□□□ -0.43
Lig3-209ENSMUST00000173009 6030445D17RikE9Q8F9 148 aa12.35□□□□□ -0.43
Lig3-209ENSMUST00000173009 Krtap14O08640 167 aa12.35□□□□□ -0.43
Lig3-209ENSMUST00000173009 CckP09240 115 aa12.35□□□□□ -0.43
Lig3-209ENSMUST00000173009 P01843 105 aa12.34□□□□□ -0.43
Lig3-209ENSMUST00000173009 Vmn1r197Q8R265 298 aa12.34□□□□□ -0.43
Lig3-209ENSMUST00000173009 Gm9805F6YK59 57 aa12.33□□□□□ -0.44
Lig3-209ENSMUST00000173009 G0s2Q61585 103 aa12.33□□□□□ -0.44
Lig3-209ENSMUST00000173009 BC048502Q80Y74 154 aa12.33□□□□□ -0.44
Lig3-209ENSMUST00000173009 Cd164Q9R0L9 197 aa12.31□□□□□ -0.44
Lig3-209ENSMUST00000173009 2310034G01RikA0A286YDL3 209 aa12.3□□□□□ -0.44
Lig3-209ENSMUST00000173009 Gm11011D3Z3L9 86 aa12.3□□□□□ -0.44
Lig3-209ENSMUST00000173009 Vpreb2P13373 142 aa12.3□□□□□ -0.44
Lig3-209ENSMUST00000173009 Wfdc10Q3V2J9 124 aa12.3□□□□□ -0.44
Lig3-209ENSMUST00000173009 Mrpl52Q9D0Y8 121 aa12.3□□□□□ -0.44
Lig3-209ENSMUST00000173009 Kmt2cQ8BRH4 4903 aa12.3□□□□□ -0.44
Lig3-209ENSMUST00000173009 Trav13n-2A0A0G2JF93 110 aa12.28□□□□□ -0.44
Lig3-209ENSMUST00000173009 Gm10570F6VB42 170 aa12.28□□□□□ -0.44
Lig3-209ENSMUST00000173009 D130052B06RikQ3UW13 202 aa12.28□□□□□ -0.44
Lig3-209ENSMUST00000173009 Dnah8Q91XQ0 4731 aa12.27□□□□□ -0.45
Lig3-209ENSMUST00000173009 Gm10642Q3TWM1 71 aa12.26□□□□□ -0.45
Lig3-209ENSMUST00000173009 Lgals4Q8K419 326 aa12.26□□□□□ -0.45
Lig3-209ENSMUST00000173009 Gm10770F7D043 238 aa12.25□□□□□ -0.45
Lig3-209ENSMUST00000173009 Gm5142Q8C5X9 133 aa12.25□□□□□ -0.45
Lig3-209ENSMUST00000173009 Tac4Q99N14 128 aa12.25□□□□□ -0.45
Lig3-209ENSMUST00000173009 Defb29Q8BGW9 78 aa12.25□□□□□ -0.45
Lig3-209ENSMUST00000173009 E130218I03RikA0A0U1RNU5 63 aa12.24□□□□□ -0.45
Lig3-209ENSMUST00000173009 Rpl37aP61514 92 aa12.24□□□□□ -0.45
Lig3-209ENSMUST00000173009 Dnal4Q9DCM4 105 aa12.24□□□□□ -0.45
Lig3-209ENSMUST00000173009 Gm11027G8JL69 66 aa12.23□□□□□ -0.45
Lig3-209ENSMUST00000173009 RetnlbQ99P86 105 aa12.23□□□□□ -0.45
Lig3-209ENSMUST00000173009 Phpt1Q9DAK9 124 aa12.23□□□□□ -0.45
Lig3-209ENSMUST00000173009 Q9DAA7 145 aa12.23□□□□□ -0.45
Lig3-209ENSMUST00000173009 Gm17521F6QAC8 156 aa12.22□□□□□ -0.45
Lig3-209ENSMUST00000173009 Lrp1bQ9JI18 4599 aa12.22□□□□□ -0.45
Lig3-209ENSMUST00000173009 Inafm2A0A1L1STD6 152 aa12.21□□□□□ -0.45
Lig3-209ENSMUST00000173009 Pkhd1l1Q80ZA4 4249 aa12.2□□□□□ -0.46
Lig3-209ENSMUST00000173009 Hectd4E9Q2E4 4418 aa12.2□□□□□ -0.46
Lig3-209ENSMUST00000173009 Vps13bQ80TY5 3993 aa12.2□□□□□ -0.46
Lig3-209ENSMUST00000173009 Igkv4-58A0A0G2JGI6 119 aa12.18□□□□□ -0.46
Lig3-209ENSMUST00000173009 Smim26Q3V460 107 aa12.18□□□□□ -0.46
Lig3-209ENSMUST00000173009 TeppQ6IMH0 216 aa12.18□□□□□ -0.46
Lig3-209ENSMUST00000173009 Ube2aQ9Z255 152 aa12.18□□□□□ -0.46
Lig3-209ENSMUST00000173009 Defb47Q30KN1 79 aa12.17□□□□□ -0.46
Lig3-209ENSMUST00000173009 Gm7276Q3TYW4 209 aa12.16□□□□□ -0.46
Lig3-209ENSMUST00000173009 5730596B20RikQ8BQ08 205 aa12.16□□□□□ -0.46
Lig3-209ENSMUST00000173009 HrnrQ8VHD8 2496 aa12.16□□□□□ -0.46
Lig3-209ENSMUST00000173009 Scgb1b3J3QJY4 93 aa12.15□□□□□ -0.46
Lig3-209ENSMUST00000173009 Igf1P05017 153 aa12.15□□□□□ -0.46
Lig3-209ENSMUST00000173009 Rpl32-psP17932 135 aa12.15□□□□□ -0.46
Lig3-209ENSMUST00000173009 Msrb1Q9JLC3 116 aa12.15□□□□□ -0.46
Lig3-209ENSMUST00000173009 Gm10320E9PW43 113 aa12.15□□□□□ -0.46
Lig3-209ENSMUST00000173009 Fam19a3Q7TPG6 132 aa12.15□□□□□ -0.46
Lig3-209ENSMUST00000173009 LbhQ9CX60 105 aa12.15□□□□□ -0.46
Lig3-209ENSMUST00000173009 Smr3aQ61900 147 aa12.14□□□□□ -0.47
Lig3-209ENSMUST00000173009 Q8K1L6 76 aa12.14□□□□□ -0.47
Lig3-209ENSMUST00000173009 Ccl25O35903 144 aa12.13□□□□□ -0.47
Lig3-209ENSMUST00000173009 Elof1P60003 83 aa12.13□□□□□ -0.47
Lig3-209ENSMUST00000173009 Gm27235Q3UW50 83 aa12.13□□□□□ -0.47
Lig3-209ENSMUST00000173009 5930422O12RikQ8C4Y4 123 aa12.13□□□□□ -0.47
Lig3-209ENSMUST00000173009 Q9DAA3 117 aa12.13□□□□□ -0.47
Lig3-209ENSMUST00000173009 A0A286YCQ8 80 aa12.12□□□□□ -0.47
Lig3-209ENSMUST00000173009 Krtap19-5O08632 62 aa12.12□□□□□ -0.47
Lig3-209ENSMUST00000173009 Cox7cP17665 63 aa12.12□□□□□ -0.47
Lig3-209ENSMUST00000173009 BtcQ05928 177 aa12.12□□□□□ -0.47
Lig3-209ENSMUST00000173009 Xlr5cQ9JJR2 179 aa12.11□□□□□ -0.47
Lig3-209ENSMUST00000173009 Igkv3-7A0A0G2JE31 119 aa12.1□□□□□ -0.47
Lig3-209ENSMUST00000173009 AI606181Q8C7B9 129 aa12.1□□□□□ -0.47
Lig3-209ENSMUST00000173009 Herc2Q4U2R1 4836 aa12.1□□□□□ -0.47
Lig3-209ENSMUST00000173009 Gm29423A0A087WRM1 55 aa12.1□□□□□ -0.47
Lig3-209ENSMUST00000173009 Igkv1-110A0A0B4J1I0 119 aa12.1□□□□□ -0.47
Lig3-209ENSMUST00000173009 Ighv10-1A0A0B4J1J6 119 aa12.09□□□□□ -0.47
Lig3-209ENSMUST00000173009 Fat2Q5F226 4351 aa12.08□□□□□ -0.48
Lig3-209ENSMUST00000173009 Igkv1-122A0A140T8M9 119 aa12.08□□□□□ -0.48
Lig3-209ENSMUST00000173009 Pcp4l1Q6W8Q3 68 aa12.08□□□□□ -0.48
Lig3-209ENSMUST00000173009 Igkv1-35A0A0G2JDE5 120 aa12.07□□□□□ -0.48
Lig3-209ENSMUST00000173009 Gm16381A0A1Y7VKT9 73 aa12.07□□□□□ -0.48
Lig3-209ENSMUST00000173009 Rpl39lQ9CQD0 51 aa12.07□□□□□ -0.48
Lig3-209ENSMUST00000173009 Mrpl55Q9CZ83 127 aa12.07□□□□□ -0.48
Lig3-209ENSMUST00000173009 Tax1bp3Q9DBG9 124 aa12.07□□□□□ -0.48
Lig3-209ENSMUST00000173009 Gm20726G3UX18 150 aa12.06□□□□□ -0.48
Lig3-209ENSMUST00000173009 CenpwQ3URR0 86 aa12.06□□□□□ -0.48
Lig3-209ENSMUST00000173009 Defb37Q7TMD2 62 aa12.06□□□□□ -0.48
Lig3-209ENSMUST00000173009 Ccdc179J3QM76 67 aa12.05□□□□□ -0.48
Lig3-209ENSMUST00000173009 Birc6O88738 4882 aa12.05□□□□□ -0.48
Lig3-209ENSMUST00000173009 Trav3-4A0A075B654 114 aa12.05□□□□□ -0.48
Lig3-209ENSMUST00000173009 Defa28D3Z1V9 94 aa12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms