RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Tex15F8VPN2 2785 aa12.5□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Ighv1-56A0A0A6YXG2 117 aa12.5□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Reg3aO09037 175 aa12.49□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Smr3aQ61900 147 aa12.49□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Gm28230A0A0A0MQ91 144 aa12.49□□□□□ -0.41
Pkp4-210ENSMUST00000168631 9230102O04RikA2ASX7 82 aa12.48□□□□□ -0.41
Pkp4-210ENSMUST00000168631 SnurfQ9WU12 71 aa12.48□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Wfdc6bF6ULY1 148 aa12.48□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Ntn5Q3UQ22 452 aa12.48□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Igkv8-28A0A0G2JE47 121 aa12.47□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Gm28374F6SG70 93 aa12.47□□□□□ -0.41
Pkp4-210ENSMUST00000168631 Igkv3-7A0A0G2JE31 119 aa12.45□□□□□ -0.42
Pkp4-210ENSMUST00000168631 Msrb1Q9JLC3 116 aa12.45□□□□□ -0.42
Pkp4-210ENSMUST00000168631 Gm3233E9Q2H5 230 aa12.45□□□□□ -0.42
Pkp4-210ENSMUST00000168631 4930519P11RikQ9CUJ8 166 aa12.45□□□□□ -0.42
Pkp4-210ENSMUST00000168631 Apoc4Q61268 124 aa12.43□□□□□ -0.42
Pkp4-210ENSMUST00000168631 Pou2af1Q64693 256 aa12.42□□□□□ -0.42
Pkp4-210ENSMUST00000168631 Gm19935A0A1B0GSF9 52 aa12.41□□□□□ -0.42
Pkp4-210ENSMUST00000168631 Krtap26-1Q9D7N2 215 aa12.41□□□□□ -0.42
Pkp4-210ENSMUST00000168631 UqcrqQ9CQ69 82 aa12.4□□□□□ -0.42
Pkp4-210ENSMUST00000168631 1700018G05RikA0A1B0GSI2 66 aa12.39□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Gm26661M0QWV4 156 aa12.39□□□□□ -0.43
Pkp4-210ENSMUST00000168631 E130208F15RikQ3UPV3 143 aa12.39□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Sox16Q62247 57 aa12.39□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Celsr1O35161 3034 aa12.39□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Hivep1Q03172 2688 aa12.39□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Lrrc37aB1AWG4 3215 aa12.39□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Cox6a2P43023 97 aa12.39□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Gm10642Q3TWM1 71 aa12.38□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Szt2A2A9C3 3431 aa12.38□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Ndufb1P0DN34 57 aa12.38□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Snhg11Q4G0K9 87 aa12.38□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Gm10772F7AIG4 85 aa12.37□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Col6a3E9PWQ3 3284 aa12.37□□□□□ -0.43
Pkp4-210ENSMUST00000168631 AI854703Q8BIN3 203 aa12.36□□□□□ -0.43
Pkp4-210ENSMUST00000168631 BptfA2A654 3036 aaKnown RBP12.36□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Gm21886J3QJU9 214 aa12.35□□□□□ -0.43
Pkp4-210ENSMUST00000168631 P01819 144 aa12.35□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Mrpl34Q99N91 92 aa12.34□□□□□ -0.43
Pkp4-210ENSMUST00000168631 H2al1mQ9DAD9 105 aa12.33□□□□□ -0.43
Pkp4-210ENSMUST00000168631 Fam19a3Q7TPG6 132 aa12.33□□□□□ -0.44
Pkp4-210ENSMUST00000168631 Brca2P97929 3329 aa12.32□□□□□ -0.44
Pkp4-210ENSMUST00000168631 Igkv8-27A0A0G2JF28 120 aa12.32□□□□□ -0.44
Pkp4-210ENSMUST00000168631 Gm11627A6PWP4 55 aa12.32□□□□□ -0.44
Pkp4-210ENSMUST00000168631 6430550D23RikE9Q1X6 194 aa12.31□□□□□ -0.44
Pkp4-210ENSMUST00000168631 Coa6Q8BGD8 79 aa12.31□□□□□ -0.44
Pkp4-210ENSMUST00000168631 Serp1Q9Z1W5 66 aa12.31□□□□□ -0.44
Pkp4-210ENSMUST00000168631 Gm44790A0A0N4SV91 103 aa12.3□□□□□ -0.44
Pkp4-210ENSMUST00000168631 2310034G01RikA0A286YDL3 209 aa12.3□□□□□ -0.44
Pkp4-210ENSMUST00000168631 Gm10837Q3UTT8 145 aa12.28□□□□□ -0.44
Pkp4-210ENSMUST00000168631 Gm10570F6VB42 170 aa12.28□□□□□ -0.44
Pkp4-210ENSMUST00000168631 Defb11Q8R2I7 77 aa12.27□□□□□ -0.44
Pkp4-210ENSMUST00000168631 Phf5aP83870 110 aaKnown RBP12.27□□□□□ -0.45
Pkp4-210ENSMUST00000168631 Eif4ebp3Q80VV3 101 aa12.27□□□□□ -0.45
Pkp4-210ENSMUST00000168631 Dmac1Q9CQ00 111 aa12.27□□□□□ -0.45
Pkp4-210ENSMUST00000168631 Lypd5Q9D7Z7 256 aa12.25□□□□□ -0.45
Pkp4-210ENSMUST00000168631 Celsr3Q91ZI0 3301 aa12.25□□□□□ -0.45
Pkp4-210ENSMUST00000168631 FrylF8VQ05 3007 aa12.25□□□□□ -0.45
Pkp4-210ENSMUST00000168631 Lelp1Q9DAE3 120 aa12.25□□□□□ -0.45
Pkp4-210ENSMUST00000168631 Csdc2Q91YQ3 154 aa12.24□□□□□ -0.45
Pkp4-210ENSMUST00000168631 Elof1P60003 83 aa12.23□□□□□ -0.45
Pkp4-210ENSMUST00000168631 AI606181Q8C7B9 129 aa12.23□□□□□ -0.45
Pkp4-210ENSMUST00000168631 Gm10770F7D043 238 aa12.23□□□□□ -0.45
Pkp4-210ENSMUST00000168631 4930518I15RikQ3V2W7 57 aa12.22□□□□□ -0.45
Pkp4-210ENSMUST00000168631 Bean1Q9EQG5 255 aa12.21□□□□□ -0.46
Pkp4-210ENSMUST00000168631 H2al1kJ3QP08 105 aa12.2□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Ighv2-5A0A0A6YY69 116 aa12.2□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Spata3Q9D9T6 193 aa12.2□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Znf414Q9DCK4 299 aa12.2□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Igkv8-19A0A0G2JFN8 121 aa12.19□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Krtap11-1E9Q2E9 183 aa12.19□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Gm9903Q8C9Y8 129 aa12.19□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Gm10197F6QEY5 67 aa12.18□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Gm10337F7DEP7 55 aa12.18□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Lama1P19137 3084 aa12.18□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Fam168bQ80XQ8 194 aa12.17□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Chchd10Q7TNL9 138 aa12.17□□□□□ -0.46
Pkp4-210ENSMUST00000168631 Spaca4Q80ZQ0 127 aa12.15□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Gm10160F6Y577 67 aa12.13□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Gpr15lA0A0B4J1N3 78 aa12.13□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Psors1c2Q80ZC9 134 aa12.13□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Gm5617Q91VN2 117 aa12.13□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Gm17689B3GLJ4 109 aa12.12□□□□□ -0.47
Pkp4-210ENSMUST00000168631 FryE9Q8I9 3020 aa12.12□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Defb50Q6TU36 73 aa12.12□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Sprr4Q8CGN8 76 aa12.11□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Rpl37aP61514 92 aa12.11□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Q8BT88 171 aa12.1□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Ighv2-2A0A075B5P8 116 aa12.09□□□□□ -0.47
Pkp4-210ENSMUST00000168631 P01821 116 aa12.09□□□□□ -0.47
Pkp4-210ENSMUST00000168631 AplnQ9R0R4 77 aa12.09□□□□□ -0.47
Pkp4-210ENSMUST00000168631 Prol1E9PYQ4 312 aa12.07□□□□□ -0.48
Pkp4-210ENSMUST00000168631 AY074887Q8R5F9 132 aa12.07□□□□□ -0.48
Pkp4-210ENSMUST00000168631 Krtap16-1A2A5X5 502 aa12.07□□□□□ -0.48
Pkp4-210ENSMUST00000168631 RetnlbQ99P86 105 aa12.05□□□□□ -0.48
Pkp4-210ENSMUST00000168631 DspE9Q557 2883 aaKnown RBP12.04□□□□□ -0.48
Pkp4-210ENSMUST00000168631 Gm10999F6Q4M4 69 aa12.04□□□□□ -0.48
Pkp4-210ENSMUST00000168631 Spint4Q9D263 159 aa12.03□□□□□ -0.48
Pkp4-210ENSMUST00000168631 Gm7137J3QMW1 236 aa12.03□□□□□ -0.48
Pkp4-210ENSMUST00000168631 Gm7138L7N2C3 230 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 134.7 ms