RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Ndufc1Q9CQY9 76 aa5.62□□□□□ -1.51
Bdnf-208ENSMUST00000111049 Ighv8-13A0A075B5Y0 101 aa5.6□□□□□ -1.51
Bdnf-208ENSMUST00000111049 Gm19935A0A1B0GSF9 52 aa5.6□□□□□ -1.51
Bdnf-208ENSMUST00000111049 Col7a1Q63870 2944 aa5.6□□□□□ -1.51
Bdnf-208ENSMUST00000111049 Defa27F2Z403 93 aa5.6□□□□□ -1.51
Bdnf-208ENSMUST00000111049 Gm10308Q9CVR5 141 aa5.6□□□□□ -1.51
Bdnf-208ENSMUST00000111049 Gm10337F7DEP7 55 aa5.6□□□□□ -1.51
Bdnf-208ENSMUST00000111049 ScxQ64124 207 aa5.6□□□□□ -1.51
Bdnf-208ENSMUST00000111049 Brk1Q91VR8 75 aa5.6□□□□□ -1.51
Bdnf-208ENSMUST00000111049 Igkv8-21A0A140T8P7 120 aa5.59□□□□□ -1.51
Bdnf-208ENSMUST00000111049 Pet100P0DJE0 76 aa5.59□□□□□ -1.51
Bdnf-208ENSMUST00000111049 Gm17509Q9CZ61 145 aa5.59□□□□□ -1.51
Bdnf-208ENSMUST00000111049 A0A286YE02 88 aa5.59□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Msrb1Q9JLC3 116 aa5.59□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Tenm3Q9WTS6 2715 aa5.58□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Ighv2-5A0A0A6YY69 116 aa5.58□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Akap13E9Q394 2776 aa5.58□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Krtap11-1E9Q2E9 183 aa5.58□□□□□ -1.52
Bdnf-208ENSMUST00000111049 CicQ924A2 2510 aa5.58□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Notch2O35516 2470 aa5.58□□□□□ -1.52
Bdnf-208ENSMUST00000111049 A030014E15RikA0A1Y7VJV2 120 aa5.58□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Helz2E9QAM5 2947 aaKnown RBP5.57□□□□□ -1.52
Bdnf-208ENSMUST00000111049 CnbpP53996 178 aaKnown RBP5.57□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Krtap16-1A2A5X5 502 aa5.57□□□□□ -1.52
Bdnf-208ENSMUST00000111049 SmcpP15265 143 aa5.57□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Trav14-1A0A0G2JF94 121 aa5.56□□□□□ -1.52
Bdnf-208ENSMUST00000111049 LystP97412 3788 aa5.56□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Igkv4-92A0A0B4J1I2 117 aa5.56□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Gm10197F6QEY5 67 aa5.56□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Notch1Q01705 2531 aa5.56□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Rps28P62858 69 aaKnown RBP5.56□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Cd164Q9R0L9 197 aa5.56□□□□□ -1.52
Bdnf-208ENSMUST00000111049 2310034G01RikA0A286YDL3 209 aa5.55□□□□□ -1.52
Bdnf-208ENSMUST00000111049 E130114P18RikF6S0S7 154 aa5.55□□□□□ -1.52
Bdnf-208ENSMUST00000111049 AY074887Q8R5F9 132 aa5.55□□□□□ -1.52
Bdnf-208ENSMUST00000111049 A730009L09RikA0A1B0GS82 72 aa5.55□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Defb37Q7TMD2 62 aa5.55□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Pdzd2E9Q1M1 2796 aa5.55□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Gm10320E9PW43 113 aa5.54□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Sslp1Q3UN54 99 aa5.54□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Cystm1Q8K353 104 aa5.54□□□□□ -1.52
Bdnf-208ENSMUST00000111049 AtrQ9JKK8 2635 aa5.54□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Igkv3-2A0A075B5P0 119 aa5.54□□□□□ -1.52
Bdnf-208ENSMUST00000111049 A830005F24RikQ8BRT5 167 aa5.54□□□□□ -1.52
Bdnf-208ENSMUST00000111049 E130208F15RikQ3UPV3 143 aa5.53□□□□□ -1.52
Bdnf-208ENSMUST00000111049 PolqQ8CGS6 2544 aa5.53□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Gm10770F7D043 238 aa5.53□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Elof1P60003 83 aa5.53□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Fam19a3Q7TPG6 132 aa5.53□□□□□ -1.52
Bdnf-208ENSMUST00000111049 Gm3233E9Q2H5 230 aa5.52□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Snhg11Q4G0K9 87 aa5.52□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Ighv2-2A0A075B5P8 116 aa5.52□□□□□ -1.53
Bdnf-208ENSMUST00000111049 P01821 116 aa5.52□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Prr15lQ8JZM2 100 aa5.52□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Gm17689B3GLJ4 109 aa5.52□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Defa28D3Z1V9 94 aa5.52□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Sprr2jO70561 109 aa5.51□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Tex15F8VPN2 2785 aa5.5□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Gm11011D3Z3L9 86 aa5.5□□□□□ -1.53
Bdnf-208ENSMUST00000111049 SnurfQ9WU12 71 aa5.5□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Vpreb1P13372 142 aa5.5□□□□□ -1.53
Bdnf-208ENSMUST00000111049 OxtP35454 125 aa5.5□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Ube2bP63147 152 aa5.5□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Fam19a5Q91WE9 132 aa5.5□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Gm11213A0A1B0GR83 88 aa5.49□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Gm10401E9Q3K6 71 aa5.49□□□□□ -1.53
Bdnf-208ENSMUST00000111049 P06320 134 aa5.49□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Fam229bQ8CF36 80 aa5.49□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Igkv8-28A0A0G2JE47 121 aa5.48□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Obox2E9PXV9 151 aa5.48□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Gm17521F6QAC8 156 aa5.48□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Vpreb2P13373 142 aa5.48□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Spink8Q09TK9 105 aa5.48□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Sprr4Q8CGN8 76 aa5.48□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Serp1Q9Z1W5 66 aa5.48□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Igkv1-110A0A0B4J1I0 119 aa5.47□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Gm12353A2AGJ4 60 aa5.47□□□□□ -1.53
Bdnf-208ENSMUST00000111049 H2al1aQ5M8Q2 105 aa5.47□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Pou2af1Q64693 256 aa5.47□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Nbeal2Q6ZQA0 2742 aa5.47□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Stab1Q8R4Y4 2571 aa5.46□□□□□ -1.53
Bdnf-208ENSMUST00000111049 Defb40Q70KL2 73 aa5.46□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Gm16485Q8C4B7 115 aa5.46□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Cox6a2P43023 97 aa5.45□□□□□ -1.54
Bdnf-208ENSMUST00000111049 UqcrqQ9CQ69 82 aa5.45□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Bean1Q9EQG5 255 aa5.45□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Defb12Q8K4N3 78 aa5.44□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Gm7276Q3TYW4 209 aa5.44□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Gm16181B0V2H2 73 aa5.43□□□□□ -1.54
Bdnf-208ENSMUST00000111049 B9d2Q3UK10 175 aa5.43□□□□□ -1.54
Bdnf-208ENSMUST00000111049 A730071L15RikQ8C4X0 137 aa5.43□□□□□ -1.54
Bdnf-208ENSMUST00000111049 H2al1bA0A087WP11 105 aa5.43□□□□□ -1.54
Bdnf-208ENSMUST00000111049 H2al1kJ3QP08 105 aa5.43□□□□□ -1.54
Bdnf-208ENSMUST00000111049 H2al1eQ810S6 105 aa5.43□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Dmac1Q9CQ00 111 aa5.43□□□□□ -1.54
Bdnf-208ENSMUST00000111049 H2al1mQ9DAD9 105 aa5.43□□□□□ -1.54
Bdnf-208ENSMUST00000111049 A330070K13RikQ8CA53 115 aa5.42□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Gm10570F6VB42 170 aa5.42□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Gm21887J3QQ04 176 aa5.42□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Gm11627A6PWP4 55 aa5.41□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms