RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Ighv2-9A0A075B5Q5 116 aa5.13□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Ighv8-13A0A075B5Y0 101 aa5.13□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Sslp1Q3UN54 99 aa5.13□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Znf414Q9DCK4 299 aa5.13□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Ifitm6A0A1B0GS75 124 aa5.13□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Pde6gP09174 87 aa5.13□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Notch2O35516 2470 aa5.12□□□□□ -1.59
Bdnf-207ENSMUST00000111047 E130114P18RikF6S0S7 154 aa5.12□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Muc4Q8JZM8 3443 aa5.12□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Ighv10-3A0A075B5T6 119 aa5.12□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Serp1Q9Z1W5 66 aa5.12□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Notch1Q01705 2531 aa5.12□□□□□ -1.59
Bdnf-207ENSMUST00000111047 9530003J23RikQ8BM26 151 aa5.12□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Fam229bQ8CF36 80 aa5.12□□□□□ -1.59
Bdnf-207ENSMUST00000111047 BikO70337 150 aa5.11□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Krtap16-1A2A5X5 502 aa5.11□□□□□ -1.59
Bdnf-207ENSMUST00000111047 1810062G17RikG3X8Y2 129 aa5.11□□□□□ -1.59
Bdnf-207ENSMUST00000111047 9230102O04RikA2ASX7 82 aa5.1□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Pou2af1Q64693 256 aa5.1□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Fam19a1Q7TPG8 133 aa5.1□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Igkv3-2A0A075B5P0 119 aa5.1□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Gm17509Q9CZ61 145 aa5.1□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Q9DAA7 145 aa5.1□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Pdzd2E9Q1M1 2796 aa5.09□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Gm3233E9Q2H5 230 aa5.09□□□□□ -1.59
Bdnf-207ENSMUST00000111047 C530025M09RikF6RGA8 229 aa5.09□□□□□ -1.59
Bdnf-207ENSMUST00000111047 Gm9903Q8C9Y8 129 aa5.09□□□□□ -1.59
Bdnf-207ENSMUST00000111047 PolqQ8CGS6 2544 aa5.09□□□□□ -1.59
Bdnf-207ENSMUST00000111047 A0A286YE02 88 aa5.09□□□□□ -1.6
Bdnf-207ENSMUST00000111047 FlnbQ80X90 2602 aaKnown RBP5.08□□□□□ -1.6
Bdnf-207ENSMUST00000111047 CnbpP53996 178 aaKnown RBP5.08□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Trav14-1A0A0G2JF94 121 aa5.08□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Krtap11-1E9Q2E9 183 aa5.08□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Igkv8-27A0A0G2JF28 120 aa5.07□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Igkv8-30A0A140T8M3 121 aa5.07□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Stab1Q8R4Y4 2571 aa5.07□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Ndufc1Q9CQY9 76 aa5.07□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Igkv4-92A0A0B4J1I2 117 aa5.06□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Msrb1Q9JLC3 116 aa5.06□□□□□ -1.6
Bdnf-207ENSMUST00000111047 A730009L09RikA0A1B0GS82 72 aa5.06□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Snhg11Q4G0K9 87 aa5.05□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Cd164Q9R0L9 197 aa5.05□□□□□ -1.6
Bdnf-207ENSMUST00000111047 E130208F15RikQ3UPV3 143 aa5.04□□□□□ -1.6
Bdnf-207ENSMUST00000111047 AY074887Q8R5F9 132 aa5.04□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Helz2E9QAM5 2947 aaKnown RBP5.04□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Ighv2-5A0A0A6YY69 116 aa5.04□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Igkv8-21A0A140T8P7 120 aa5.04□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Gm10308Q9CVR5 141 aa5.04□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Tex15F8VPN2 2785 aa5.04□□□□□ -1.6
Bdnf-207ENSMUST00000111047 2310034G01RikA0A286YDL3 209 aa5.04□□□□□ -1.6
Bdnf-207ENSMUST00000111047 A830005F24RikQ8BRT5 167 aa5.03□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Defb37Q7TMD2 62 aa5.03□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Ube2bP63147 152 aa5.03□□□□□ -1.6
Bdnf-207ENSMUST00000111047 Elof1P60003 83 aa5.01□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Fam19a3Q7TPG6 132 aa5.01□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Spint4Q9D263 159 aa5.01□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Nbeal2Q6ZQA0 2742 aa5.01□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Spink8Q09TK9 105 aa5.01□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Obox2E9PXV9 151 aa5□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Gm10401E9Q3K6 71 aa5□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Gm10320E9PW43 113 aa5□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Prr15lQ8JZM2 100 aa5□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Gm10770F7D043 238 aa5□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Gm16485Q8C4B7 115 aa5□□□□□ -1.61
Bdnf-207ENSMUST00000111047 A930002H24RikQ8C8Y3 163 aa5□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Vpreb2P13373 142 aa5□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Col7a1Q63870 2944 aa4.99□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Gm16181B0V2H2 73 aa4.99□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Sprr2jO70561 109 aa4.99□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Hivep1Q03172 2688 aa4.99□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Gm17521F6QAC8 156 aa4.99□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Sprr4Q8CGN8 76 aa4.99□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Ighv2-2A0A075B5P8 116 aa4.98□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Gm12353A2AGJ4 60 aa4.98□□□□□ -1.61
Bdnf-207ENSMUST00000111047 P01821 116 aa4.98□□□□□ -1.61
Bdnf-207ENSMUST00000111047 B9d2Q3UK10 175 aa4.98□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Gm11011D3Z3L9 86 aa4.97□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Itpr2Q9Z329 2701 aa4.97□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Gm17689B3GLJ4 109 aa4.97□□□□□ -1.61
Bdnf-207ENSMUST00000111047 OxtP35454 125 aa4.97□□□□□ -1.61
Bdnf-207ENSMUST00000111047 Nsd1O88491 2588 aaKnown RBP4.96□□□□□ -1.61
Bdnf-207ENSMUST00000111047 AplnQ9R0R4 77 aa4.96□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Igkv8-28A0A0G2JE47 121 aa4.95□□□□□ -1.62
Bdnf-207ENSMUST00000111047 P06320 134 aa4.95□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Defb40Q70KL2 73 aa4.95□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Gm10570F6VB42 170 aa4.95□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Gm11627A6PWP4 55 aa4.94□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Cox6a2P43023 97 aa4.94□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Igkv1-110A0A0B4J1I0 119 aa4.94□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Igkv3-10A0A0G2JGN0 119 aa4.94□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Dmac1Q9CQ00 111 aa4.94□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Col6a5A6H584 2640 aa4.94□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Fam104aA2A6P4 185 aa4.93□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Gm7276Q3TYW4 209 aa4.93□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Fn1P11276 2477 aaKnown RBP4.93□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Wfdc6bF6ULY1 148 aa4.92□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Gm21887J3QQ04 176 aa4.92□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Phxr5P08399 672 aa4.92□□□□□ -1.62
Bdnf-207ENSMUST00000111047 UqcrqQ9CQ69 82 aa4.92□□□□□ -1.62
Bdnf-207ENSMUST00000111047 Vpreb3D3Z6J4 130 aa4.92□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms