RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Spata3Q9D9T6 193 aa4.74□□□□□ -1.65
Scn3a-202ENSMUST00000100069 Gm11213A0A1B0GR83 88 aa4.73□□□□□ -1.65
Scn3a-202ENSMUST00000100069 FasnP19096 2504 aaKnown RBP4.72□□□□□ -1.65
Scn3a-202ENSMUST00000100069 Gpr15lA0A0B4J1N3 78 aa4.72□□□□□ -1.65
Scn3a-202ENSMUST00000100069 Defb37Q7TMD2 62 aa4.72□□□□□ -1.65
Scn3a-202ENSMUST00000100069 Gm44790A0A0N4SV91 103 aa4.71□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Usp9xP70398 2559 aaKnown RBP4.71□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Gm10770F7D043 238 aa4.7□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Snhg11Q4G0K9 87 aa4.69□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Phxr4P15974 95 aa4.69□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Coa5Q99M07 74 aa4.69□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Pla2g10Q9QXX3 151 aa4.69□□□□□ -1.66
Scn3a-202ENSMUST00000100069 7530416G11RikJ3QJX6 159 aa4.68□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Gm10300Q8C8P7 189 aa4.67□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Phf5aP83870 110 aaKnown RBP4.66□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Gm7276Q3TYW4 209 aa4.66□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Q8BT88 171 aa4.65□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Usp9yF8VPU6 2556 aa4.65□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Ankrd17Q99NH0 2603 aaKnown RBP4.65□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Spaca4Q80ZQ0 127 aa4.65□□□□□ -1.66
Scn3a-202ENSMUST00000100069 Cypt15B1AXS0 87 aa4.65□□□□□ -1.67
Scn3a-202ENSMUST00000100069 Gm10772F7AIG4 85 aa4.63□□□□□ -1.67
Scn3a-202ENSMUST00000100069 AI854703Q8BIN3 203 aa4.63□□□□□ -1.67
Scn3a-202ENSMUST00000100069 CriptO70333 101 aa4.63□□□□□ -1.67
Scn3a-202ENSMUST00000100069 Rnase13Q5GAM7 153 aa4.63□□□□□ -1.67
Scn3a-202ENSMUST00000100069 Krtap24-1G3X9A2 248 aa4.63□□□□□ -1.67
Scn3a-202ENSMUST00000100069 Epg5Q80TA9 2572 aa4.62□□□□□ -1.67
Scn3a-202ENSMUST00000100069 Sprr1bQ62267 153 aa4.61□□□□□ -1.67
Scn3a-202ENSMUST00000100069 Sprr4Q8CGN8 76 aa4.61□□□□□ -1.67
Scn3a-202ENSMUST00000100069 SrcapA0A087WQ44 3271 aa4.61□□□□□ -1.67
Scn3a-202ENSMUST00000100069 FlnbQ80X90 2602 aaKnown RBP4.6□□□□□ -1.67
Scn3a-202ENSMUST00000100069 Defb1P56386 69 aa4.59□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Gm26620Q9CY65 116 aa4.59□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Cypt14J3QPF7 87 aa4.59□□□□□ -1.68
Scn3a-202ENSMUST00000100069 SetxA2AKX3 2646 aa4.58□□□□□ -1.68
Scn3a-202ENSMUST00000100069 AY074887Q8R5F9 132 aa4.58□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Sec61bQ9CQS8 96 aaKnown RBP4.57□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Cep192E9Q4Y4 2514 aaKnown RBP4.57□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Lypd5Q9D7Z7 256 aa4.57□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Gm5617Q91VN2 117 aa4.55□□□□□ -1.68
Scn3a-202ENSMUST00000100069 CnbpP53996 178 aaKnown RBP4.55□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Fam168bQ80XQ8 194 aa4.55□□□□□ -1.68
Scn3a-202ENSMUST00000100069 OxtP35454 125 aa4.55□□□□□ -1.68
Scn3a-202ENSMUST00000100069 C530025M09RikF6RGA8 229 aa4.54□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Gm9955Q8CEJ8 102 aa4.54□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Gm21798J3QNU5 87 aa4.53□□□□□ -1.68
Scn3a-202ENSMUST00000100069 1810062G17RikG3X8Y2 129 aa4.53□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Nbeal1E9PYP2 2688 aa4.53□□□□□ -1.68
Scn3a-202ENSMUST00000100069 Unc79Q0KK59 2596 aa4.52□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Krtap11-1E9Q2E9 183 aa4.52□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Zcchc13Q9D548 170 aa4.52□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Abca12E9Q876 2595 aa4.52□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Gm9821Q8K076 103 aa4.52□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Fam104aA2A6P4 185 aa4.51□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Phxr5P08399 672 aa4.51□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Dmbt1Q60997 2085 aa4.5□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Gm10320E9PW43 113 aa4.49□□□□□ -1.69
Scn3a-202ENSMUST00000100069 1700042G07RikB1AUF7 90 aa4.48□□□□□ -1.69
Scn3a-202ENSMUST00000100069 2310034C09RikQ9D746 214 aa4.47□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Defb9Q8R2I6 67 aa4.47□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Chtf8P0CG14 533 aa4.46□□□□□ -1.69
Scn3a-202ENSMUST00000100069 Gcn1E9PVA8 2671 aaKnown RBP4.46□□□□□ -1.7
Scn3a-202ENSMUST00000100069 A330070K13RikQ8CA53 115 aa4.45□□□□□ -1.7
Scn3a-202ENSMUST00000100069 Usp24B1AY13 2617 aaKnown RBP4.44□□□□□ -1.7
Scn3a-202ENSMUST00000100069 Camk2n1Q6QWF9 78 aa4.44□□□□□ -1.7
Scn3a-202ENSMUST00000100069 Gm10065F6TJM2 114 aa4.44□□□□□ -1.7
Scn3a-202ENSMUST00000100069 Gm21887J3QQ04 176 aa4.44□□□□□ -1.7
Scn3a-202ENSMUST00000100069 Akap13E9Q394 2776 aa4.43□□□□□ -1.7
Scn3a-202ENSMUST00000100069 Gm3285A0A1W2P7U0 201 aa4.43□□□□□ -1.7
Scn3a-202ENSMUST00000100069 NbdyA0A0N4SUI7 68 aa4.41□□□□□ -1.7
Scn3a-202ENSMUST00000100069 Gm3646F6S692 53 aa4.4□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Spink7Q6IE32 76 aa4.4□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Bahcc1Q3UHR0 2643 aa4.39□□□□□ -1.71
Scn3a-202ENSMUST00000100069 A0A1Y7VLE6 161 aa4.39□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Plac8Q9JI48 112 aa4.39□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Mast4Q811L6 2618 aa4.39□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Prrc2cQ3TLH4 2846 aaKnown RBP4.39□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Odf3bQ5M8M2 238 aa4.38□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Golgb1E9PVZ8 3238 aa4.37□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Gm11565A2A4M7 156 aa4.36□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Gm4491E0CX42 125 aa4.36□□□□□ -1.71
Scn3a-202ENSMUST00000100069 6030445D17RikE9Q8F9 148 aa4.35□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Gm3880A0A1B0GSB3 72 aa4.34□□□□□ -1.71
Scn3a-202ENSMUST00000100069 CicQ924A2 2510 aa4.34□□□□□ -1.71
Scn3a-202ENSMUST00000100069 AtrQ9JKK8 2635 aa4.34□□□□□ -1.71
Scn3a-202ENSMUST00000100069 Smim29Q8R043 75 aa4.34□□□□□ -1.72
Scn3a-202ENSMUST00000100069 Fn1P11276 2477 aaKnown RBP4.33□□□□□ -1.72
Scn3a-202ENSMUST00000100069 Notch1Q01705 2531 aa4.33□□□□□ -1.72
Scn3a-202ENSMUST00000100069 4933415A04RikQ9D443 101 aa4.33□□□□□ -1.72
Scn3a-202ENSMUST00000100069 Fam229bQ8CF36 80 aa4.33□□□□□ -1.72
Scn3a-202ENSMUST00000100069 Fam229aB2KGE5 128 aa4.32□□□□□ -1.72
Scn3a-202ENSMUST00000100069 Anapc11Q9CPX9 84 aa4.32□□□□□ -1.72
Scn3a-202ENSMUST00000100069 CenpfE9Q3P4 2997 aaKnown RBP4.31□□□□□ -1.72
Scn3a-202ENSMUST00000100069 Dnah12Q3V0Q1 3086 aa4.31□□□□□ -1.72
Scn3a-202ENSMUST00000100069 SmcpP15265 143 aa4.29□□□□□ -1.72
Scn3a-202ENSMUST00000100069 Gm10139O88245 57 aa4.29□□□□□ -1.72
Scn3a-202ENSMUST00000100069 PcntP48725 2898 aa4.29□□□□□ -1.72
Scn3a-202ENSMUST00000100069 Map1aQ9QYR6 2776 aa4.28□□□□□ -1.72
Scn3a-202ENSMUST00000100069 Col6a5A6H584 2640 aa4.27□□□□□ -1.73
Scn3a-202ENSMUST00000100069 Zfp292Q9Z2U2 2698 aa4.27□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 98.1 ms