RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 B430305J03RikQ8BQQ8 176 aa7.18□□□□□ -1.26
Scn9a-201ENSMUST00000100063 MobpQ9D2P8 170 aa7.18□□□□□ -1.26
Scn9a-201ENSMUST00000100063 Znf580Q9DB38 172 aa7.17□□□□□ -1.26
Scn9a-201ENSMUST00000100063 Gm20661K7N787 53 aa7.17□□□□□ -1.26
Scn9a-201ENSMUST00000100063 Snhg11Q4G0K9 87 aa7.16□□□□□ -1.26
Scn9a-201ENSMUST00000100063 Ighv2-2A0A075B5P8 116 aa7.16□□□□□ -1.26
Scn9a-201ENSMUST00000100063 P01821 116 aa7.16□□□□□ -1.26
Scn9a-201ENSMUST00000100063 Gm5617Q91VN2 117 aa7.15□□□□□ -1.26
Scn9a-201ENSMUST00000100063 Defb37Q7TMD2 62 aa7.14□□□□□ -1.27
Scn9a-201ENSMUST00000100063 Defb1P56386 69 aa7.14□□□□□ -1.27
Scn9a-201ENSMUST00000100063 AW011738F6S7Q2 159 aa7.13□□□□□ -1.27
Scn9a-201ENSMUST00000100063 Elof1P60003 83 aa7.12□□□□□ -1.27
Scn9a-201ENSMUST00000100063 Rnase13Q5GAM7 153 aa7.1□□□□□ -1.27
Scn9a-201ENSMUST00000100063 Stab1Q8R4Y4 2571 aa7.08□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Gm44790A0A0N4SV91 103 aa7.08□□□□□ -1.28
Scn9a-201ENSMUST00000100063 7530416G11RikJ3QJX6 159 aa7.07□□□□□ -1.28
Scn9a-201ENSMUST00000100063 SnurfQ9WU12 71 aa7.07□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Gm9821Q8K076 103 aa7.06□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Ypel4Q65Z93 127 aa7.05□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Nsd1O88491 2588 aaKnown RBP7.05□□□□□ -1.28
Scn9a-201ENSMUST00000100063 HrnrQ8VHD8 2496 aa7.04□□□□□ -1.28
Scn9a-201ENSMUST00000100063 4930518I15RikQ3V2W7 57 aa7.03□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Mast4Q811L6 2618 aa7.03□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Zfp292Q9Z2U2 2698 aa7.03□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Gm10135F6TEE5 83 aa7.03□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Sostdc1Q9CQN4 206 aa7.03□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Gm3250E9Q1M3 230 aa7.03□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Psors1c2Q80ZC9 134 aa7.03□□□□□ -1.28
Scn9a-201ENSMUST00000100063 FlnaQ8BTM8 2647 aaKnown RBP7.03□□□□□ -1.28
Scn9a-201ENSMUST00000100063 Q8BT88 171 aa7.02□□□□□ -1.29
Scn9a-201ENSMUST00000100063 3110070M22RikQ9DAQ7 118 aa7.02□□□□□ -1.29
Scn9a-201ENSMUST00000100063 Fam168bQ80XQ8 194 aa7.01□□□□□ -1.29
Scn9a-201ENSMUST00000100063 Notch1Q01705 2531 aa7.01□□□□□ -1.29
Scn9a-201ENSMUST00000100063 Gm10197F6QEY5 67 aa7□□□□□ -1.29
Scn9a-201ENSMUST00000100063 Gm10770F7D043 238 aa6.99□□□□□ -1.29
Scn9a-201ENSMUST00000100063 Crip3Q6Q6R3 243 aa6.97□□□□□ -1.29
Scn9a-201ENSMUST00000100063 Spink7Q6IE32 76 aa6.96□□□□□ -1.29
Scn9a-201ENSMUST00000100063 Cdc42se1Q8BHL7 80 aa6.96□□□□□ -1.3
Scn9a-201ENSMUST00000100063 Gm26620Q9CY65 116 aa6.95□□□□□ -1.3
Scn9a-201ENSMUST00000100063 Cypt15B1AXS0 87 aa6.94□□□□□ -1.3
Scn9a-201ENSMUST00000100063 Smr3aQ61900 147 aa6.94□□□□□ -1.3
Scn9a-201ENSMUST00000100063 Hectd1Q69ZR2 2618 aaKnown RBP6.92□□□□□ -1.3
Scn9a-201ENSMUST00000100063 Itpr3P70227 2670 aa6.9□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Gm10772F7AIG4 85 aa6.9□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Phxr5P08399 672 aa6.89□□□□□ -1.31
Scn9a-201ENSMUST00000100063 CriptO70333 101 aa6.89□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Sprr4Q8CGN8 76 aa6.88□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Igsf10Q3V1M1 2594 aa6.88□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Defb9Q8R2I6 67 aa6.88□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Gm11213A0A1B0GR83 88 aa6.86□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Krtap11-1E9Q2E9 183 aa6.86□□□□□ -1.31
Scn9a-201ENSMUST00000100063 A330070K13RikQ8CA53 115 aa6.86□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Plac8Q9JI48 112 aa6.86□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Gcn1E9PVA8 2671 aaKnown RBP6.86□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Uqcr11Q9CPX8 56 aa6.86□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Krtap26-1Q9D7N2 215 aa6.84□□□□□ -1.31
Scn9a-201ENSMUST00000100063 Krtap16-1A2A5X5 502 aa6.82□□□□□ -1.32
Scn9a-201ENSMUST00000100063 A530084C06RikQ3UTW2 186 aa6.82□□□□□ -1.32
Scn9a-201ENSMUST00000100063 Anapc11Q9CPX9 84 aa6.81□□□□□ -1.32
Scn9a-201ENSMUST00000100063 Coa5Q99M07 74 aa6.81□□□□□ -1.32
Scn9a-201ENSMUST00000100063 CnbpP53996 178 aaKnown RBP6.8□□□□□ -1.32
Scn9a-201ENSMUST00000100063 Gm10308Q9CVR5 141 aa6.79□□□□□ -1.32
Scn9a-201ENSMUST00000100063 Fam229aB2KGE5 128 aa6.77□□□□□ -1.33
Scn9a-201ENSMUST00000100063 Chtf8P0CG14 533 aa6.77□□□□□ -1.33
Scn9a-201ENSMUST00000100063 9530053A07RikE9PVG8 2581 aa6.76□□□□□ -1.33
Scn9a-201ENSMUST00000100063 Sprr1bQ62267 153 aa6.76□□□□□ -1.33
Scn9a-201ENSMUST00000100063 Gm7276Q3TYW4 209 aa6.75□□□□□ -1.33
Scn9a-201ENSMUST00000100063 AI854703Q8BIN3 203 aa6.75□□□□□ -1.33
Scn9a-201ENSMUST00000100063 AY074887Q8R5F9 132 aa6.75□□□□□ -1.33
Scn9a-201ENSMUST00000100063 Zcchc13Q9D548 170 aa6.75□□□□□ -1.33
Scn9a-201ENSMUST00000100063 Gm9195A0A140LHT4 2805 aa6.74□□□□□ -1.33
Scn9a-201ENSMUST00000100063 Fam104aA2A6P4 185 aa6.72□□□□□ -1.33
Scn9a-201ENSMUST00000100063 Gm21798J3QNU5 87 aa6.72□□□□□ -1.33
Scn9a-201ENSMUST00000100063 Gm9955Q8CEJ8 102 aa6.72□□□□□ -1.33
Scn9a-201ENSMUST00000100063 2310034C09RikQ9D746 214 aa6.71□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Tep1P97499 2629 aa6.7□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Gm10320E9PW43 113 aa6.7□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Phxr4P15974 95 aa6.69□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Rps28P62858 69 aaKnown RBP6.69□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Camk2n1Q6QWF9 78 aa6.69□□□□□ -1.34
Scn9a-201ENSMUST00000100063 NbdyA0A0N4SUI7 68 aa6.69□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Sec61bQ9CQS8 96 aaKnown RBP6.69□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Chd6A3KFM7 2711 aa6.68□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Lypd5Q9D7Z7 256 aa6.68□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Itpr1P11881 2749 aa6.67□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Cypt14J3QPF7 87 aa6.67□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Krtap15-1Q9QZU5 150 aa6.67□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Gm10065F6TJM2 114 aa6.66□□□□□ -1.34
Scn9a-201ENSMUST00000100063 Gm3233E9Q2H5 230 aa6.64□□□□□ -1.35
Scn9a-201ENSMUST00000100063 Gm4491E0CX42 125 aa6.61□□□□□ -1.35
Scn9a-201ENSMUST00000100063 Map1aQ9QYR6 2776 aa6.6□□□□□ -1.35
Scn9a-201ENSMUST00000100063 Col6a5A6H584 2640 aa6.6□□□□□ -1.35
Scn9a-201ENSMUST00000100063 Gm10643Q3URG9 111 aa6.6□□□□□ -1.35
Scn9a-201ENSMUST00000100063 Prrc2cQ3TLH4 2846 aaKnown RBP6.59□□□□□ -1.36
Scn9a-201ENSMUST00000100063 Stab2Q8R4U0 2559 aa6.58□□□□□ -1.36
Scn9a-201ENSMUST00000100063 C530025M09RikF6RGA8 229 aa6.57□□□□□ -1.36
Scn9a-201ENSMUST00000100063 Gm3880A0A1B0GSB3 72 aa6.56□□□□□ -1.36
Scn9a-201ENSMUST00000100063 Nbeal2Q6ZQA0 2742 aa6.54□□□□□ -1.36
Scn9a-201ENSMUST00000100063 PcntP48725 2898 aa6.54□□□□□ -1.36
Scn9a-201ENSMUST00000100063 Pkd1l1Q8R526 2615 aa6.54□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 87.5 ms