RNA–Protein interactions for RNA: ENSMUST00000049074.12

Ptprf-201, Transcript of Receptor-type tyrosine-protein phosphatase F, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ptprf, Length 7,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprf-201ENSMUST00000049074 Gm10135F6TEE5 83 aa11.85□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Plac8Q9JI48 112 aa11.85□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Gm44790A0A0N4SV91 103 aa11.85□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Dnah12Q3V0Q1 3086 aa11.84□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Gm28539A0A087WSL9 92 aa11.84□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Cep192E9Q4Y4 2514 aaKnown RBP11.84□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Ighv2-2A0A075B5P8 116 aa11.83□□□□□ -0.52
Ptprf-201ENSMUST00000049074 P01821 116 aa11.83□□□□□ -0.52
Ptprf-201ENSMUST00000049074 Lama3Q61789 3330 aa11.8□□□□□ -0.52
Ptprf-201ENSMUST00000049074 Gm27235Q3UW50 83 aa11.8□□□□□ -0.52
Ptprf-201ENSMUST00000049074 Csdc2Q91YQ3 154 aa11.78□□□□□ -0.52
Ptprf-201ENSMUST00000049074 Nbeal1E9PYP2 2688 aa11.77□□□□□ -0.52
Ptprf-201ENSMUST00000049074 BC025920Q3US60 128 aa11.77□□□□□ -0.52
Ptprf-201ENSMUST00000049074 Gm26661M0QWV4 156 aa11.77□□□□□ -0.53
Ptprf-201ENSMUST00000049074 MobpQ9D2P8 170 aa11.77□□□□□ -0.53
Ptprf-201ENSMUST00000049074 SnurfQ9WU12 71 aa11.77□□□□□ -0.53
Ptprf-201ENSMUST00000049074 Gm10160F6Y577 67 aa11.77□□□□□ -0.53
Ptprf-201ENSMUST00000049074 Anapc11Q9CPX9 84 aa11.76□□□□□ -0.53
Ptprf-201ENSMUST00000049074 TrioQ0KL02 3102 aa11.74□□□□□ -0.53
Ptprf-201ENSMUST00000049074 Nsd1O88491 2588 aaKnown RBP11.73□□□□□ -0.53
Ptprf-201ENSMUST00000049074 4930507D05RikQ8C9C9 103 aa11.73□□□□□ -0.53
Ptprf-201ENSMUST00000049074 Krtap11-1E9Q2E9 183 aa11.73□□□□□ -0.53
Ptprf-201ENSMUST00000049074 Gm20661K7N787 53 aa11.72□□□□□ -0.53
Ptprf-201ENSMUST00000049074 3110070M22RikQ9DAQ7 118 aa11.71□□□□□ -0.53
Ptprf-201ENSMUST00000049074 PcntP48725 2898 aa11.71□□□□□ -0.53
Ptprf-201ENSMUST00000049074 Q8BT88 171 aa11.71□□□□□ -0.53
Ptprf-201ENSMUST00000049074 Elof1P60003 83 aa11.71□□□□□ -0.54
Ptprf-201ENSMUST00000049074 Limd2Q8BGB5 128 aa11.7□□□□□ -0.54
Ptprf-201ENSMUST00000049074 7530416G11RikJ3QJX6 159 aa11.7□□□□□ -0.54
Ptprf-201ENSMUST00000049074 Pla2g10Q9QXX3 151 aa11.7□□□□□ -0.54
Ptprf-201ENSMUST00000049074 Spink13Q3UTS8 97 aa11.68□□□□□ -0.54
Ptprf-201ENSMUST00000049074 Gm10770F7D043 238 aa11.68□□□□□ -0.54
Ptprf-201ENSMUST00000049074 Rnase13Q5GAM7 153 aa11.67□□□□□ -0.54
Ptprf-201ENSMUST00000049074 Defb9Q8R2I6 67 aa11.66□□□□□ -0.54
Ptprf-201ENSMUST00000049074 Gm10772F7AIG4 85 aa11.65□□□□□ -0.54
Ptprf-201ENSMUST00000049074 Sostdc1Q9CQN4 206 aa11.63□□□□□ -0.55
Ptprf-201ENSMUST00000049074 Coa6Q8BGD8 79 aa11.6□□□□□ -0.55
Ptprf-201ENSMUST00000049074 Cep350E9Q309 3095 aa11.6□□□□□ -0.55
Ptprf-201ENSMUST00000049074 Spint4Q9D263 159 aa11.56□□□□□ -0.56
Ptprf-201ENSMUST00000049074 Gm19935A0A1B0GSF9 52 aa11.55□□□□□ -0.56
Ptprf-201ENSMUST00000049074 Akap13E9Q394 2776 aa11.55□□□□□ -0.56
Ptprf-201ENSMUST00000049074 Phxr5P08399 672 aa11.54□□□□□ -0.56
Ptprf-201ENSMUST00000049074 Crip3Q6Q6R3 243 aa11.54□□□□□ -0.56
Ptprf-201ENSMUST00000049074 Fn1P11276 2477 aaKnown RBP11.53□□□□□ -0.56
Ptprf-201ENSMUST00000049074 Gm9821Q8K076 103 aa11.53□□□□□ -0.56
Ptprf-201ENSMUST00000049074 Gm10197F6QEY5 67 aa11.52□□□□□ -0.56
Ptprf-201ENSMUST00000049074 Sprr4Q8CGN8 76 aa11.51□□□□□ -0.57
Ptprf-201ENSMUST00000049074 A330070K13RikQ8CA53 115 aa11.5□□□□□ -0.57
Ptprf-201ENSMUST00000049074 FlnaQ8BTM8 2647 aaKnown RBP11.49□□□□□ -0.57
Ptprf-201ENSMUST00000049074 Mp68P56379 58 aa11.46□□□□□ -0.57
Ptprf-201ENSMUST00000049074 4930518I15RikQ3V2W7 57 aa11.44□□□□□ -0.58
Ptprf-201ENSMUST00000049074 AW011738F6S7Q2 159 aa11.43□□□□□ -0.58
Ptprf-201ENSMUST00000049074 Spink7Q6IE32 76 aa11.43□□□□□ -0.58
Ptprf-201ENSMUST00000049074 Gm10337F7DEP7 55 aa11.42□□□□□ -0.58
Ptprf-201ENSMUST00000049074 Bod1lE9Q6J5 3032 aa11.42□□□□□ -0.58
Ptprf-201ENSMUST00000049074 Lama2Q60675 3118 aaKnown RBP11.41□□□□□ -0.58
Ptprf-201ENSMUST00000049074 Cypt15B1AXS0 87 aa11.4□□□□□ -0.58
Ptprf-201ENSMUST00000049074 Hectd1Q69ZR2 2618 aaKnown RBP11.39□□□□□ -0.59
Ptprf-201ENSMUST00000049074 Lypd5Q9D7Z7 256 aa11.38□□□□□ -0.59
Ptprf-201ENSMUST00000049074 Gm7173A0A0G2JEB6 3132 aa11.38□□□□□ -0.59
Ptprf-201ENSMUST00000049074 CenpfE9Q3P4 2997 aaKnown RBP11.37□□□□□ -0.59
Ptprf-201ENSMUST00000049074 Sprr1bQ62267 153 aa11.37□□□□□ -0.59
Ptprf-201ENSMUST00000049074 Lelp1Q9DAE3 120 aa11.37□□□□□ -0.59
Ptprf-201ENSMUST00000049074 Gm20538F6Z9R1 75 aa11.36□□□□□ -0.59
Ptprf-201ENSMUST00000049074 HrnrQ8VHD8 2496 aa11.35□□□□□ -0.59
Ptprf-201ENSMUST00000049074 Krtap26-1Q9D7N2 215 aa11.35□□□□□ -0.59
Ptprf-201ENSMUST00000049074 AI854703Q8BIN3 203 aa11.34□□□□□ -0.59
Ptprf-201ENSMUST00000049074 Gm36176A0A1W2P8D5 158 aa11.33□□□□□ -0.6
Ptprf-201ENSMUST00000049074 Stab1Q8R4Y4 2571 aa11.33□□□□□ -0.6
Ptprf-201ENSMUST00000049074 Psors1c2Q80ZC9 134 aa11.31□□□□□ -0.6
Ptprf-201ENSMUST00000049074 HttP42859 3119 aa11.31□□□□□ -0.6
Ptprf-201ENSMUST00000049074 Gm26620Q9CY65 116 aa11.3□□□□□ -0.6
Ptprf-201ENSMUST00000049074 Gm9508A0A1W2P7W0 230 aa11.29□□□□□ -0.6
Ptprf-201ENSMUST00000049074 Itpr3P70227 2670 aa11.29□□□□□ -0.6
Ptprf-201ENSMUST00000049074 Col12a1Q60847 3120 aa11.28□□□□□ -0.6
Ptprf-201ENSMUST00000049074 Gm17349F7BGH6 99 aa11.28□□□□□ -0.6
Ptprf-201ENSMUST00000049074 AY074887Q8R5F9 132 aa11.27□□□□□ -0.6
Ptprf-201ENSMUST00000049074 Usp34Q6ZQ93 3582 aa11.27□□□□□ -0.61
Ptprf-201ENSMUST00000049074 Cdc42se1Q8BHL7 80 aa11.25□□□□□ -0.61
Ptprf-201ENSMUST00000049074 Krtap15-1Q9QZU5 150 aa11.24□□□□□ -0.61
Ptprf-201ENSMUST00000049074 Igsf10Q3V1M1 2594 aa11.23□□□□□ -0.61
Ptprf-201ENSMUST00000049074 Chtf8P0CG14 533 aa11.23□□□□□ -0.61
Ptprf-201ENSMUST00000049074 C530025M09RikF6RGA8 229 aa11.23□□□□□ -0.61
Ptprf-201ENSMUST00000049074 Mast4Q811L6 2618 aa11.22□□□□□ -0.61
Ptprf-201ENSMUST00000049074 Gcn1E9PVA8 2671 aaKnown RBP11.21□□□□□ -0.61
Ptprf-201ENSMUST00000049074 Gm9195A0A140LHT4 2805 aa11.21□□□□□ -0.62
Ptprf-201ENSMUST00000049074 A530084C06RikQ3UTW2 186 aa11.17□□□□□ -0.62
Ptprf-201ENSMUST00000049074 Mki67E9PVX6 3177 aaKnown RBP11.17□□□□□ -0.62
Ptprf-201ENSMUST00000049074 Notch1Q01705 2531 aa11.17□□□□□ -0.62
Ptprf-201ENSMUST00000049074 CnbpP53996 178 aaKnown RBP11.16□□□□□ -0.62
Ptprf-201ENSMUST00000049074 Ash1lQ99MY8 2958 aa11.16□□□□□ -0.62
Ptprf-201ENSMUST00000049074 Coa5Q99M07 74 aa11.15□□□□□ -0.63
Ptprf-201ENSMUST00000049074 Kmt2bO08550 2713 aa11.14□□□□□ -0.63
Ptprf-201ENSMUST00000049074 Eif4ebp3Q80VV3 101 aa11.13□□□□□ -0.63
Ptprf-201ENSMUST00000049074 Gm11213A0A1B0GR83 88 aa11.12□□□□□ -0.63
Ptprf-201ENSMUST00000049074 Prrc2cQ3TLH4 2846 aaKnown RBP11.09□□□□□ -0.63
Ptprf-201ENSMUST00000049074 MgaA2AWL7 3003 aaKnown RBP11.09□□□□□ -0.63
Ptprf-201ENSMUST00000049074 Smim29Q8R043 75 aa11.09□□□□□ -0.63
Ptprf-201ENSMUST00000049074 Fam104aA2A6P4 185 aa11.09□□□□□ -0.63
Ptprf-201ENSMUST00000049074 Gm10308Q9CVR5 141 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms