RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Psors1c2Q80ZC9 134 aa12.31□□□□□ -0.44
Scaf11-201ENSMUST00000047835 9230102O04RikA2ASX7 82 aa12.31□□□□□ -0.44
Scaf11-201ENSMUST00000047835 6430550D23RikE9Q1X6 194 aa12.3□□□□□ -0.44
Scaf11-201ENSMUST00000047835 SnurfQ9WU12 71 aa12.3□□□□□ -0.44
Scaf11-201ENSMUST00000047835 FlnbQ80X90 2602 aaKnown RBP12.3□□□□□ -0.44
Scaf11-201ENSMUST00000047835 Gm19935A0A1B0GSF9 52 aa12.29□□□□□ -0.44
Scaf11-201ENSMUST00000047835 Gm7138L7N2C3 230 aa12.29□□□□□ -0.44
Scaf11-201ENSMUST00000047835 Gm3238W4VSP7 230 aa12.29□□□□□ -0.44
Scaf11-201ENSMUST00000047835 Prol1E9PYQ4 312 aa12.28□□□□□ -0.44
Scaf11-201ENSMUST00000047835 Gm10770F7D043 238 aa12.28□□□□□ -0.44
Scaf11-201ENSMUST00000047835 Jbts17Q8CE72 3214 aa12.24□□□□□ -0.45
Scaf11-201ENSMUST00000047835 Ighv2-2A0A075B5P8 116 aa12.24□□□□□ -0.45
Scaf11-201ENSMUST00000047835 Ighv2-5A0A0A6YY69 116 aa12.24□□□□□ -0.45
Scaf11-201ENSMUST00000047835 P01821 116 aa12.24□□□□□ -0.45
Scaf11-201ENSMUST00000047835 H2al1kJ3QP08 105 aa12.22□□□□□ -0.45
Scaf11-201ENSMUST00000047835 AI854703Q8BIN3 203 aa12.22□□□□□ -0.45
Scaf11-201ENSMUST00000047835 Usp9yF8VPU6 2556 aa12.22□□□□□ -0.45
Scaf11-201ENSMUST00000047835 Rpl37aP61514 92 aa12.22□□□□□ -0.45
Scaf11-201ENSMUST00000047835 Gm27235Q3UW50 83 aa12.22□□□□□ -0.45
Scaf11-201ENSMUST00000047835 Gm7137J3QMW1 236 aa12.21□□□□□ -0.45
Scaf11-201ENSMUST00000047835 Sprr4Q8CGN8 76 aa12.21□□□□□ -0.45
Scaf11-201ENSMUST00000047835 Defb50Q6TU36 73 aa12.2□□□□□ -0.46
Scaf11-201ENSMUST00000047835 Q8BT88 171 aa12.2□□□□□ -0.46
Scaf11-201ENSMUST00000047835 4930518I15RikQ3V2W7 57 aa12.19□□□□□ -0.46
Scaf11-201ENSMUST00000047835 Gm10999F6Q4M4 69 aa12.18□□□□□ -0.46
Scaf11-201ENSMUST00000047835 Coa6Q8BGD8 79 aa12.18□□□□□ -0.46
Scaf11-201ENSMUST00000047835 Bean1Q9EQG5 255 aa12.17□□□□□ -0.46
Scaf11-201ENSMUST00000047835 Ankrd11E9Q4F7 2643 aa12.15□□□□□ -0.47
Scaf11-201ENSMUST00000047835 Plac8Q9JI48 112 aa12.14□□□□□ -0.47
Scaf11-201ENSMUST00000047835 Col12a1Q60847 3120 aa12.14□□□□□ -0.47
Scaf11-201ENSMUST00000047835 Gm10160F6Y577 67 aa12.13□□□□□ -0.47
Scaf11-201ENSMUST00000047835 Eif4ebp3Q80VV3 101 aa12.13□□□□□ -0.47
Scaf11-201ENSMUST00000047835 Gm17606F6ZL36 78 aa12.13□□□□□ -0.47
Scaf11-201ENSMUST00000047835 AtrQ9JKK8 2635 aa12.11□□□□□ -0.47
Scaf11-201ENSMUST00000047835 Hectd1Q69ZR2 2618 aaKnown RBP12.11□□□□□ -0.47
Scaf11-201ENSMUST00000047835 AY074887Q8R5F9 132 aa12.09□□□□□ -0.47
Scaf11-201ENSMUST00000047835 Gm17689B3GLJ4 109 aa12.09□□□□□ -0.47
Scaf11-201ENSMUST00000047835 Sprr1bQ62267 153 aa12.08□□□□□ -0.48
Scaf11-201ENSMUST00000047835 Nbeal1E9PYP2 2688 aa12.07□□□□□ -0.48
Scaf11-201ENSMUST00000047835 AW011738F6S7Q2 159 aa12.07□□□□□ -0.48
Scaf11-201ENSMUST00000047835 C530025M09RikF6RGA8 229 aa12.07□□□□□ -0.48
Scaf11-201ENSMUST00000047835 A930002H24RikQ8C8Y3 163 aa12.06□□□□□ -0.48
Scaf11-201ENSMUST00000047835 Gm7173A0A0G2JEB6 3132 aa12.06□□□□□ -0.48
Scaf11-201ENSMUST00000047835 Mki67E9PVX6 3177 aaKnown RBP12.06□□□□□ -0.48
Scaf11-201ENSMUST00000047835 Defb9Q8R2I6 67 aa12.05□□□□□ -0.48
Scaf11-201ENSMUST00000047835 FlnaQ8BTM8 2647 aaKnown RBP12.05□□□□□ -0.48
Scaf11-201ENSMUST00000047835 Gm10197F6QEY5 67 aa12.04□□□□□ -0.48
Scaf11-201ENSMUST00000047835 Gm10337F7DEP7 55 aa12.04□□□□□ -0.48
Scaf11-201ENSMUST00000047835 OxtP35454 125 aa12.01□□□□□ -0.49
Scaf11-201ENSMUST00000047835 Anapc11Q9CPX9 84 aa12□□□□□ -0.49
Scaf11-201ENSMUST00000047835 Gm11565A2A4M7 156 aa11.99□□□□□ -0.49
Scaf11-201ENSMUST00000047835 Defb1P56386 69 aa11.99□□□□□ -0.49
Scaf11-201ENSMUST00000047835 HttP42859 3119 aa11.98□□□□□ -0.49
Scaf11-201ENSMUST00000047835 Gm10308Q9CVR5 141 aa11.97□□□□□ -0.49
Scaf11-201ENSMUST00000047835 Gcn1E9PVA8 2671 aaKnown RBP11.96□□□□□ -0.49
Scaf11-201ENSMUST00000047835 Gm9195A0A140LHT4 2805 aa11.92□□□□□ -0.5
Scaf11-201ENSMUST00000047835 Bod1lE9Q6J5 3032 aa11.92□□□□□ -0.5
Scaf11-201ENSMUST00000047835 Rev3lQ61493 3122 aa11.92□□□□□ -0.5
Scaf11-201ENSMUST00000047835 Chd7A2AJK6 2986 aaKnown RBP11.92□□□□□ -0.5
Scaf11-201ENSMUST00000047835 Tnrc18Q80WC3 2878 aa11.91□□□□□ -0.5
Scaf11-201ENSMUST00000047835 FasnP19096 2504 aaKnown RBP11.91□□□□□ -0.5
Scaf11-201ENSMUST00000047835 Nsd1O88491 2588 aaKnown RBP11.91□□□□□ -0.5
Scaf11-201ENSMUST00000047835 Q8BGJ3 129 aa11.9□□□□□ -0.5
Scaf11-201ENSMUST00000047835 Myo15bI7HPW8 3033 aa11.89□□□□□ -0.51
Scaf11-201ENSMUST00000047835 Krtap16-1A2A5X5 502 aa11.89□□□□□ -0.51
Scaf11-201ENSMUST00000047835 Usp24B1AY13 2617 aaKnown RBP11.89□□□□□ -0.51
Scaf11-201ENSMUST00000047835 A330070K13RikQ8CA53 115 aa11.89□□□□□ -0.51
Scaf11-201ENSMUST00000047835 Itpr1P11881 2749 aa11.88□□□□□ -0.51
Scaf11-201ENSMUST00000047835 4930507D05RikQ8C9C9 103 aa11.88□□□□□ -0.51
Scaf11-201ENSMUST00000047835 Spint4Q9D263 159 aa11.87□□□□□ -0.51
Scaf11-201ENSMUST00000047835 Phxr5P08399 672 aa11.86□□□□□ -0.51
Scaf11-201ENSMUST00000047835 Gm11213A0A1B0GR83 88 aa11.84□□□□□ -0.51
Scaf11-201ENSMUST00000047835 Gm7276Q3TYW4 209 aa11.84□□□□□ -0.51
Scaf11-201ENSMUST00000047835 CnbpP53996 178 aaKnown RBP11.83□□□□□ -0.52
Scaf11-201ENSMUST00000047835 Gm36176A0A1W2P8D5 158 aa11.82□□□□□ -0.52
Scaf11-201ENSMUST00000047835 Gm20661K7N787 53 aa11.82□□□□□ -0.52
Scaf11-201ENSMUST00000047835 7530416G11RikJ3QJX6 159 aa11.81□□□□□ -0.52
Scaf11-201ENSMUST00000047835 Cdh23Q99PF4 3354 aa11.8□□□□□ -0.52
Scaf11-201ENSMUST00000047835 Dmbt1Q60997 2085 aa11.8□□□□□ -0.52
Scaf11-201ENSMUST00000047835 A530084C06RikQ3UTW2 186 aa11.79□□□□□ -0.52
Scaf11-201ENSMUST00000047835 Smim29Q8R043 75 aa11.78□□□□□ -0.52
Scaf11-201ENSMUST00000047835 Cypt15B1AXS0 87 aa11.77□□□□□ -0.52
Scaf11-201ENSMUST00000047835 Zcchc13Q9D548 170 aa11.75□□□□□ -0.53
Scaf11-201ENSMUST00000047835 Fam104aA2A6P4 185 aa11.75□□□□□ -0.53
Scaf11-201ENSMUST00000047835 Prrc2cQ3TLH4 2846 aaKnown RBP11.74□□□□□ -0.53
Scaf11-201ENSMUST00000047835 Coa5Q99M07 74 aa11.73□□□□□ -0.53
Scaf11-201ENSMUST00000047835 Gm12216A0A1W2P827 62 aa11.72□□□□□ -0.53
Scaf11-201ENSMUST00000047835 MgaA2AWL7 3003 aaKnown RBP11.7□□□□□ -0.54
Scaf11-201ENSMUST00000047835 Gm17349F7BGH6 99 aa11.69□□□□□ -0.54
Scaf11-201ENSMUST00000047835 Limd2Q8BGB5 128 aa11.68□□□□□ -0.54
Scaf11-201ENSMUST00000047835 Stab1Q8R4Y4 2571 aa11.66□□□□□ -0.54
Scaf11-201ENSMUST00000047835 Dmxl1Q6PNC0 3013 aa11.66□□□□□ -0.54
Scaf11-201ENSMUST00000047835 Prr13Q9CQJ5 137 aa11.65□□□□□ -0.54
Scaf11-201ENSMUST00000047835 Fbn2Q61555 2907 aa11.65□□□□□ -0.54
Scaf11-201ENSMUST00000047835 Gm9508A0A1W2P7W0 230 aa11.61□□□□□ -0.55
Scaf11-201ENSMUST00000047835 Notch1Q01705 2531 aa11.61□□□□□ -0.55
Scaf11-201ENSMUST00000047835 KalrnA2CG49 2964 aa11.6□□□□□ -0.55
Scaf11-201ENSMUST00000047835 NbdyA0A0N4SUI7 68 aa11.6□□□□□ -0.55
Scaf11-201ENSMUST00000047835 Fn1P11276 2477 aaKnown RBP11.59□□□□□ -0.55
Scaf11-201ENSMUST00000047835 Rps28P62858 69 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms