RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 Kmt2bO08550 2713 aa11.56□□□□□ -0.56
Col27a1-201ENSMUST00000036300 Spink13Q3UTS8 97 aa11.55□□□□□ -0.56
Col27a1-201ENSMUST00000036300 Gm9573F7C950 1606 aa11.55□□□□□ -0.56
Col27a1-201ENSMUST00000036300 Gm10837Q3UTT8 145 aa11.55□□□□□ -0.56
Col27a1-201ENSMUST00000036300 Spata3Q9D9T6 193 aa11.54□□□□□ -0.56
Col27a1-201ENSMUST00000036300 Gm27235Q3UW50 83 aa11.53□□□□□ -0.56
Col27a1-201ENSMUST00000036300 Phxr5P08399 672 aa11.53□□□□□ -0.56
Col27a1-201ENSMUST00000036300 Krtap24-1G3X9A2 248 aa11.53□□□□□ -0.56
Col27a1-201ENSMUST00000036300 Gm17689B3GLJ4 109 aa11.52□□□□□ -0.57
Col27a1-201ENSMUST00000036300 Cdip1Q9DB75 208 aa11.51□□□□□ -0.57
Col27a1-201ENSMUST00000036300 Rnase13Q5GAM7 153 aa11.51□□□□□ -0.57
Col27a1-201ENSMUST00000036300 4930518I15RikQ3V2W7 57 aa11.5□□□□□ -0.57
Col27a1-201ENSMUST00000036300 FasnP19096 2504 aaKnown RBP11.5□□□□□ -0.57
Col27a1-201ENSMUST00000036300 Ep400Q8CHI8 3072 aaKnown RBP11.49□□□□□ -0.57
Col27a1-201ENSMUST00000036300 Fam168bQ80XQ8 194 aa11.48□□□□□ -0.57
Col27a1-201ENSMUST00000036300 SetxA2AKX3 2646 aa11.46□□□□□ -0.57
Col27a1-201ENSMUST00000036300 Ankrd11E9Q4F7 2643 aa11.46□□□□□ -0.57
Col27a1-201ENSMUST00000036300 Unc79Q0KK59 2596 aa11.46□□□□□ -0.57
Col27a1-201ENSMUST00000036300 Elof1P60003 83 aa11.44□□□□□ -0.58
Col27a1-201ENSMUST00000036300 Gm10770F7D043 238 aa11.44□□□□□ -0.58
Col27a1-201ENSMUST00000036300 Abca12E9Q876 2595 aa11.44□□□□□ -0.58
Col27a1-201ENSMUST00000036300 Ighv2-2A0A075B5P8 116 aa11.43□□□□□ -0.58
Col27a1-201ENSMUST00000036300 P01821 116 aa11.43□□□□□ -0.58
Col27a1-201ENSMUST00000036300 3110070M22RikQ9DAQ7 118 aa11.43□□□□□ -0.58
Col27a1-201ENSMUST00000036300 HrnrQ8VHD8 2496 aa11.41□□□□□ -0.58
Col27a1-201ENSMUST00000036300 Dnah12Q3V0Q1 3086 aa11.41□□□□□ -0.58
Col27a1-201ENSMUST00000036300 Prune2Q52KR3 3084 aa11.4□□□□□ -0.58
Col27a1-201ENSMUST00000036300 Q8BT88 171 aa11.39□□□□□ -0.59
Col27a1-201ENSMUST00000036300 Myo18bE9PV66 2605 aa11.38□□□□□ -0.59
Col27a1-201ENSMUST00000036300 MobpQ9D2P8 170 aa11.38□□□□□ -0.59
Col27a1-201ENSMUST00000036300 A530084C06RikQ3UTW2 186 aa11.35□□□□□ -0.59
Col27a1-201ENSMUST00000036300 Cdc42se1Q8BHL7 80 aa11.32□□□□□ -0.6
Col27a1-201ENSMUST00000036300 Nsd1O88491 2588 aaKnown RBP11.32□□□□□ -0.6
Col27a1-201ENSMUST00000036300 Akap13E9Q394 2776 aa11.26□□□□□ -0.61
Col27a1-201ENSMUST00000036300 Fn1P11276 2477 aaKnown RBP11.26□□□□□ -0.61
Col27a1-201ENSMUST00000036300 Anapc11Q9CPX9 84 aa11.25□□□□□ -0.61
Col27a1-201ENSMUST00000036300 AI854703Q8BIN3 203 aa11.24□□□□□ -0.61
Col27a1-201ENSMUST00000036300 Krtap11-1E9Q2E9 183 aa11.24□□□□□ -0.61
Col27a1-201ENSMUST00000036300 OxtP35454 125 aa11.22□□□□□ -0.61
Col27a1-201ENSMUST00000036300 AtrQ9JKK8 2635 aa11.2□□□□□ -0.62
Col27a1-201ENSMUST00000036300 Cep350E9Q309 3095 aa11.2□□□□□ -0.62
Col27a1-201ENSMUST00000036300 Crip3Q6Q6R3 243 aa11.19□□□□□ -0.62
Col27a1-201ENSMUST00000036300 Spink7Q6IE32 76 aa11.19□□□□□ -0.62
Col27a1-201ENSMUST00000036300 Gm10772F7AIG4 85 aa11.19□□□□□ -0.62
Col27a1-201ENSMUST00000036300 Defb9Q8R2I6 67 aa11.18□□□□□ -0.62
Col27a1-201ENSMUST00000036300 Lama3Q61789 3330 aa11.18□□□□□ -0.62
Col27a1-201ENSMUST00000036300 Coa5Q99M07 74 aa11.16□□□□□ -0.62
Col27a1-201ENSMUST00000036300 Krtap16-1A2A5X5 502 aa11.15□□□□□ -0.63
Col27a1-201ENSMUST00000036300 Plac8Q9JI48 112 aa11.15□□□□□ -0.63
Col27a1-201ENSMUST00000036300 Gm9821Q8K076 103 aa11.14□□□□□ -0.63
Col27a1-201ENSMUST00000036300 Gm3233E9Q2H5 230 aa11.12□□□□□ -0.63
Col27a1-201ENSMUST00000036300 Sprr4Q8CGN8 76 aa11.12□□□□□ -0.63
Col27a1-201ENSMUST00000036300 Smr3aQ61900 147 aa11.11□□□□□ -0.63
Col27a1-201ENSMUST00000036300 Cypt15B1AXS0 87 aa11.11□□□□□ -0.63
Col27a1-201ENSMUST00000036300 CriptO70333 101 aa11.1□□□□□ -0.63
Col27a1-201ENSMUST00000036300 FlnbQ80X90 2602 aaKnown RBP11.09□□□□□ -0.63
Col27a1-201ENSMUST00000036300 Zfp292Q9Z2U2 2698 aa11.08□□□□□ -0.64
Col27a1-201ENSMUST00000036300 Gm10308Q9CVR5 141 aa11.06□□□□□ -0.64
Col27a1-201ENSMUST00000036300 Bod1lE9Q6J5 3032 aa11.05□□□□□ -0.64
Col27a1-201ENSMUST00000036300 PcntP48725 2898 aa11.04□□□□□ -0.64
Col27a1-201ENSMUST00000036300 TrioQ0KL02 3102 aa11.04□□□□□ -0.64
Col27a1-201ENSMUST00000036300 Stab1Q8R4Y4 2571 aa11.04□□□□□ -0.64
Col27a1-201ENSMUST00000036300 Gm26620Q9CY65 116 aa11.01□□□□□ -0.65
Col27a1-201ENSMUST00000036300 Psors1c2Q80ZC9 134 aa11□□□□□ -0.65
Col27a1-201ENSMUST00000036300 Prrc2cQ3TLH4 2846 aaKnown RBP10.99□□□□□ -0.65
Col27a1-201ENSMUST00000036300 Rps28P62858 69 aaKnown RBP10.98□□□□□ -0.65
Col27a1-201ENSMUST00000036300 Uqcr11Q9CPX8 56 aa10.98□□□□□ -0.65
Col27a1-201ENSMUST00000036300 A330070K13RikQ8CA53 115 aa10.96□□□□□ -0.65
Col27a1-201ENSMUST00000036300 Sprr1bQ62267 153 aa10.95□□□□□ -0.66
Col27a1-201ENSMUST00000036300 AY074887Q8R5F9 132 aa10.95□□□□□ -0.66
Col27a1-201ENSMUST00000036300 2310034C09RikQ9D746 214 aa10.92□□□□□ -0.66
Col27a1-201ENSMUST00000036300 Notch1Q01705 2531 aa10.92□□□□□ -0.66
Col27a1-201ENSMUST00000036300 Chtf8P0CG14 533 aa10.91□□□□□ -0.66
Col27a1-201ENSMUST00000036300 AW011738F6S7Q2 159 aa10.91□□□□□ -0.66
Col27a1-201ENSMUST00000036300 Lama2Q60675 3118 aaKnown RBP10.89□□□□□ -0.67
Col27a1-201ENSMUST00000036300 Ash1lQ99MY8 2958 aa10.89□□□□□ -0.67
Col27a1-201ENSMUST00000036300 FlnaQ8BTM8 2647 aaKnown RBP10.88□□□□□ -0.67
Col27a1-201ENSMUST00000036300 Gm21798J3QNU5 87 aa10.88□□□□□ -0.67
Col27a1-201ENSMUST00000036300 Gm7138L7N2C3 230 aa10.88□□□□□ -0.67
Col27a1-201ENSMUST00000036300 Phxr4P15974 95 aa10.88□□□□□ -0.67
Col27a1-201ENSMUST00000036300 Gm3238W4VSP7 230 aa10.88□□□□□ -0.67
Col27a1-201ENSMUST00000036300 Eif4ebp3Q80VV3 101 aa10.86□□□□□ -0.67
Col27a1-201ENSMUST00000036300 Ranbp2Q9ERU9 3053 aaKnown RBP10.86□□□□□ -0.67
Col27a1-201ENSMUST00000036300 Krtap26-1Q9D7N2 215 aa10.84□□□□□ -0.67
Col27a1-201ENSMUST00000036300 Gm3880A0A1B0GSB3 72 aa10.84□□□□□ -0.67
Col27a1-201ENSMUST00000036300 C530025M09RikF6RGA8 229 aa10.83□□□□□ -0.68
Col27a1-201ENSMUST00000036300 Gm7137J3QMW1 236 aa10.83□□□□□ -0.68
Col27a1-201ENSMUST00000036300 CenpfE9Q3P4 2997 aaKnown RBP10.82□□□□□ -0.68
Col27a1-201ENSMUST00000036300 Lypd5Q9D7Z7 256 aa10.8□□□□□ -0.68
Col27a1-201ENSMUST00000036300 Gm11213A0A1B0GR83 88 aa10.8□□□□□ -0.68
Col27a1-201ENSMUST00000036300 Gm7276Q3TYW4 209 aa10.8□□□□□ -0.68
Col27a1-201ENSMUST00000036300 Gm9195A0A140LHT4 2805 aa10.79□□□□□ -0.68
Col27a1-201ENSMUST00000036300 Krtap15-1Q9QZU5 150 aa10.76□□□□□ -0.69
Col27a1-201ENSMUST00000036300 Mki67E9PVX6 3177 aaKnown RBP10.75□□□□□ -0.69
Col27a1-201ENSMUST00000036300 Prr13Q9CQJ5 137 aa10.74□□□□□ -0.69
Col27a1-201ENSMUST00000036300 Gcn1E9PVA8 2671 aaKnown RBP10.72□□□□□ -0.69
Col27a1-201ENSMUST00000036300 Gm7173A0A0G2JEB6 3132 aa10.72□□□□□ -0.69
Col27a1-201ENSMUST00000036300 Gm9955Q8CEJ8 102 aa10.7□□□□□ -0.7
Col27a1-201ENSMUST00000036300 Gm4491E0CX42 125 aa10.7□□□□□ -0.7
Col27a1-201ENSMUST00000036300 CnbpP53996 178 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms