RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Gm17606F6ZL36 78 aa6.77□□□□□ -1.33
Ubr1-201ENSMUST00000028728 Znf414Q9DCK4 299 aa6.77□□□□□ -1.33
Ubr1-201ENSMUST00000028728 Rpl37aP61514 92 aa6.76□□□□□ -1.33
Ubr1-201ENSMUST00000028728 A330070K13RikQ8CA53 115 aa6.76□□□□□ -1.33
Ubr1-201ENSMUST00000028728 Gm27235Q3UW50 83 aa6.74□□□□□ -1.33
Ubr1-201ENSMUST00000028728 Chd8Q09XV5 2582 aaKnown RBP6.74□□□□□ -1.33
Ubr1-201ENSMUST00000028728 MtorQ9JLN9 2549 aa6.74□□□□□ -1.33
Ubr1-201ENSMUST00000028728 SrcapA0A087WQ44 3271 aa6.74□□□□□ -1.33
Ubr1-201ENSMUST00000028728 Defb39Q70KL3 74 aa6.73□□□□□ -1.33
Ubr1-201ENSMUST00000028728 Gm10642Q3TWM1 71 aa6.73□□□□□ -1.33
Ubr1-201ENSMUST00000028728 1600014C23RikQ9DAX4 101 aa6.72□□□□□ -1.33
Ubr1-201ENSMUST00000028728 Fam229bQ8CF36 80 aa6.72□□□□□ -1.33
Ubr1-201ENSMUST00000028728 C530025M09RikF6RGA8 229 aa6.72□□□□□ -1.33
Ubr1-201ENSMUST00000028728 Krtap11-1E9Q2E9 183 aa6.71□□□□□ -1.34
Ubr1-201ENSMUST00000028728 Chtf8P0CG14 533 aa6.69□□□□□ -1.34
Ubr1-201ENSMUST00000028728 Mp68P56379 58 aa6.69□□□□□ -1.34
Ubr1-201ENSMUST00000028728 Phf5aP83870 110 aaKnown RBP6.69□□□□□ -1.34
Ubr1-201ENSMUST00000028728 Q8BGJ3 129 aa6.68□□□□□ -1.34
Ubr1-201ENSMUST00000028728 Lypd5Q9D7Z7 256 aa6.68□□□□□ -1.34
Ubr1-201ENSMUST00000028728 TrrapQ80YV3 2565 aaKnown RBP6.68□□□□□ -1.34
Ubr1-201ENSMUST00000028728 Krtap24-1G3X9A2 248 aa6.67□□□□□ -1.34
Ubr1-201ENSMUST00000028728 Gm3285A0A1W2P7U0 201 aa6.67□□□□□ -1.34
Ubr1-201ENSMUST00000028728 Bahcc1Q3UHR0 2643 aa6.65□□□□□ -1.35
Ubr1-201ENSMUST00000028728 Epg5Q80TA9 2572 aa6.64□□□□□ -1.35
Ubr1-201ENSMUST00000028728 Fam168bQ80XQ8 194 aa6.64□□□□□ -1.35
Ubr1-201ENSMUST00000028728 AplnQ9R0R4 77 aa6.64□□□□□ -1.35
Ubr1-201ENSMUST00000028728 Ly6g6cQ9Z1Q4 126 aa6.63□□□□□ -1.35
Ubr1-201ENSMUST00000028728 Nbeal1E9PYP2 2688 aa6.62□□□□□ -1.35
Ubr1-201ENSMUST00000028728 Usp9yF8VPU6 2556 aa6.61□□□□□ -1.35
Ubr1-201ENSMUST00000028728 Gpr15lA0A0B4J1N3 78 aa6.6□□□□□ -1.35
Ubr1-201ENSMUST00000028728 AW011738F6S7Q2 159 aa6.59□□□□□ -1.35
Ubr1-201ENSMUST00000028728 Fam104aA2A6P4 185 aa6.59□□□□□ -1.35
Ubr1-201ENSMUST00000028728 Defb10Q8R2I8 73 aa6.59□□□□□ -1.35
Ubr1-201ENSMUST00000028728 Cystm1Q8K353 104 aa6.57□□□□□ -1.36
Ubr1-201ENSMUST00000028728 Cypt15B1AXS0 87 aa6.57□□□□□ -1.36
Ubr1-201ENSMUST00000028728 Spaca4Q80ZQ0 127 aa6.57□□□□□ -1.36
Ubr1-201ENSMUST00000028728 SmcpP15265 143 aa6.56□□□□□ -1.36
Ubr1-201ENSMUST00000028728 Defb1P56386 69 aa6.56□□□□□ -1.36
Ubr1-201ENSMUST00000028728 Dmbt1Q60997 2085 aa6.56□□□□□ -1.36
Ubr1-201ENSMUST00000028728 Myo18bE9PV66 2605 aa6.55□□□□□ -1.36
Ubr1-201ENSMUST00000028728 Abca12E9Q876 2595 aa6.55□□□□□ -1.36
Ubr1-201ENSMUST00000028728 Phxr5P08399 672 aa6.54□□□□□ -1.36
Ubr1-201ENSMUST00000028728 Gm10320E9PW43 113 aa6.51□□□□□ -1.37
Ubr1-201ENSMUST00000028728 CenpfE9Q3P4 2997 aaKnown RBP6.51□□□□□ -1.37
Ubr1-201ENSMUST00000028728 Gm21798J3QNU5 87 aa6.51□□□□□ -1.37
Ubr1-201ENSMUST00000028728 Zcchc13Q9D548 170 aa6.51□□□□□ -1.37
Ubr1-201ENSMUST00000028728 Smim29Q8R043 75 aa6.49□□□□□ -1.37
Ubr1-201ENSMUST00000028728 Unc79Q0KK59 2596 aa6.49□□□□□ -1.37
Ubr1-201ENSMUST00000028728 Gm26620Q9CY65 116 aa6.48□□□□□ -1.37
Ubr1-201ENSMUST00000028728 Spata3Q9D9T6 193 aa6.47□□□□□ -1.37
Ubr1-201ENSMUST00000028728 RetnlbQ99P86 105 aa6.46□□□□□ -1.37
Ubr1-201ENSMUST00000028728 Ankrd17Q99NH0 2603 aaKnown RBP6.46□□□□□ -1.38
Ubr1-201ENSMUST00000028728 2310034C09RikQ9D746 214 aa6.46□□□□□ -1.38
Ubr1-201ENSMUST00000028728 Gm3646F6S692 53 aa6.45□□□□□ -1.38
Ubr1-201ENSMUST00000028728 Defb9Q8R2I6 67 aa6.44□□□□□ -1.38
Ubr1-201ENSMUST00000028728 Gm11565A2A4M7 156 aa6.44□□□□□ -1.38
Ubr1-201ENSMUST00000028728 A730071L15RikQ8C4X0 137 aa6.43□□□□□ -1.38
Ubr1-201ENSMUST00000028728 Cypt14J3QPF7 87 aa6.43□□□□□ -1.38
Ubr1-201ENSMUST00000028728 Rnase13Q5GAM7 153 aa6.41□□□□□ -1.38
Ubr1-201ENSMUST00000028728 1700042G07RikB1AUF7 90 aa6.41□□□□□ -1.38
Ubr1-201ENSMUST00000028728 4933415A04RikQ9D443 101 aa6.4□□□□□ -1.38
Ubr1-201ENSMUST00000028728 Zfp292Q9Z2U2 2698 aa6.4□□□□□ -1.39
Ubr1-201ENSMUST00000028728 CriptO70333 101 aa6.39□□□□□ -1.39
Ubr1-201ENSMUST00000028728 Gcn1E9PVA8 2671 aaKnown RBP6.39□□□□□ -1.39
Ubr1-201ENSMUST00000028728 6030445D17RikE9Q8F9 148 aa6.36□□□□□ -1.39
Ubr1-201ENSMUST00000028728 Gm9955Q8CEJ8 102 aa6.36□□□□□ -1.39
Ubr1-201ENSMUST00000028728 Defb11Q8R2I7 77 aa6.35□□□□□ -1.39
Ubr1-201ENSMUST00000028728 Gm10139O88245 57 aa6.34□□□□□ -1.39
Ubr1-201ENSMUST00000028728 Gm37013Q8K491 104 aa6.34□□□□□ -1.39
Ubr1-201ENSMUST00000028728 Kmt2bO08550 2713 aa6.34□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Gm10065F6TJM2 114 aa6.33□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Plac8Q9JI48 112 aa6.31□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Prrc2cQ3TLH4 2846 aaKnown RBP6.31□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Gm9821Q8K076 103 aa6.3□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Pla2g10Q9QXX3 151 aa6.3□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Gm3880A0A1B0GSB3 72 aa6.3□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Anapc11Q9CPX9 84 aa6.3□□□□□ -1.4
Ubr1-201ENSMUST00000028728 NbdyA0A0N4SUI7 68 aa6.3□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Gm20538F6Z9R1 75 aa6.3□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Sprr1aQ62266 144 aa6.29□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Golgb1E9PVZ8 3238 aa6.29□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Gm3250E9Q1M3 230 aa6.28□□□□□ -1.4
Ubr1-201ENSMUST00000028728 Fn1P11276 2477 aaKnown RBP6.27□□□□□ -1.41
Ubr1-201ENSMUST00000028728 HrnrQ8VHD8 2496 aa6.27□□□□□ -1.41
Ubr1-201ENSMUST00000028728 Odf3bQ5M8M2 238 aa6.26□□□□□ -1.41
Ubr1-201ENSMUST00000028728 PcntP48725 2898 aa6.26□□□□□ -1.41
Ubr1-201ENSMUST00000028728 FasnP19096 2504 aaKnown RBP6.25□□□□□ -1.41
Ubr1-201ENSMUST00000028728 Ankrd11E9Q4F7 2643 aa6.24□□□□□ -1.41
Ubr1-201ENSMUST00000028728 Map1aQ9QYR6 2776 aa6.23□□□□□ -1.41
Ubr1-201ENSMUST00000028728 Gm16253D3Z167 63 aa6.23□□□□□ -1.41
Ubr1-201ENSMUST00000028728 CicQ924A2 2510 aa6.23□□□□□ -1.41
Ubr1-201ENSMUST00000028728 FlnaQ8BTM8 2647 aaKnown RBP6.22□□□□□ -1.41
Ubr1-201ENSMUST00000028728 Notch1Q01705 2531 aa6.21□□□□□ -1.41
Ubr1-201ENSMUST00000028728 Gm9195A0A140LHT4 2805 aa6.2□□□□□ -1.42
Ubr1-201ENSMUST00000028728 Nsd1O88491 2588 aaKnown RBP6.2□□□□□ -1.42
Ubr1-201ENSMUST00000028728 Usp24B1AY13 2617 aaKnown RBP6.19□□□□□ -1.42
Ubr1-201ENSMUST00000028728 Gm4491E0CX42 125 aa6.19□□□□□ -1.42
Ubr1-201ENSMUST00000028728 NipblQ6KCD5 2798 aaKnown RBP6.17□□□□□ -1.42
Ubr1-201ENSMUST00000028728 Lelp1Q9DAE3 120 aa6.16□□□□□ -1.42
Ubr1-201ENSMUST00000028728 Dnah12Q3V0Q1 3086 aa6.13□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms