RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 B230307C23RikQ8BLB2 64 aa13.76□□□□□ -0.21
Trim47-201ENSMUST00000021120 Bles03Q8VD62 251 aa13.76□□□□□ -0.21
Trim47-201ENSMUST00000021120 Ighv2-9A0A075B5Q5 116 aa13.76□□□□□ -0.21
Trim47-201ENSMUST00000021120 Igkv8-34A0A0G2JDU0 121 aa13.76□□□□□ -0.21
Trim47-201ENSMUST00000021120 P01819 144 aa13.76□□□□□ -0.21
Trim47-201ENSMUST00000021120 Defa20Q45VN2 95 aa13.76□□□□□ -0.21
Trim47-201ENSMUST00000021120 Gm10308Q9CVR5 141 aa13.76□□□□□ -0.21
Trim47-201ENSMUST00000021120 Bean1Q9EQG5 255 aa13.76□□□□□ -0.21
Trim47-201ENSMUST00000021120 Ighv10-3A0A075B5T6 119 aa13.75□□□□□ -0.21
Trim47-201ENSMUST00000021120 E130208F15RikQ3UPV3 143 aa13.75□□□□□ -0.21
Trim47-201ENSMUST00000021120 Muc6Q80T03 2850 aa13.74□□□□□ -0.21
Trim47-201ENSMUST00000021120 CnbpP53996 178 aaKnown RBP13.74□□□□□ -0.21
Trim47-201ENSMUST00000021120 SnurfQ9WU12 71 aa13.73□□□□□ -0.21
Trim47-201ENSMUST00000021120 Gm9903Q8C9Y8 129 aa13.72□□□□□ -0.21
Trim47-201ENSMUST00000021120 Gm11213A0A1B0GR83 88 aa13.71□□□□□ -0.21
Trim47-201ENSMUST00000021120 Igkv8-21A0A140T8P7 120 aa13.7□□□□□ -0.22
Trim47-201ENSMUST00000021120 Inafm2A0A1L1STD6 152 aa13.69□□□□□ -0.22
Trim47-201ENSMUST00000021120 C530025M09RikF6RGA8 229 aa13.69□□□□□ -0.22
Trim47-201ENSMUST00000021120 Ormdl1Q921I0 153 aa13.69□□□□□ -0.22
Trim47-201ENSMUST00000021120 Sec61gP60060 68 aa13.68□□□□□ -0.22
Trim47-201ENSMUST00000021120 Fam19a1Q7TPG8 133 aa13.68□□□□□ -0.22
Trim47-201ENSMUST00000021120 4930556J24RikQ9D4U7 146 aa13.68□□□□□ -0.22
Trim47-201ENSMUST00000021120 FasnP19096 2504 aaKnown RBP13.67□□□□□ -0.22
Trim47-201ENSMUST00000021120 AW011738F6S7Q2 159 aa13.67□□□□□ -0.22
Trim47-201ENSMUST00000021120 Ndufc1Q9CQY9 76 aa13.67□□□□□ -0.22
Trim47-201ENSMUST00000021120 Pet100P0DJE0 76 aa13.66□□□□□ -0.22
Trim47-201ENSMUST00000021120 EnhoQ8K1D8 76 aa13.66□□□□□ -0.22
Trim47-201ENSMUST00000021120 AplnQ9R0R4 77 aa13.66□□□□□ -0.22
Trim47-201ENSMUST00000021120 Tenm2Q9WTS5 2764 aa13.66□□□□□ -0.22
Trim47-201ENSMUST00000021120 Igkv2-109A0A075B5K6 120 aa13.65□□□□□ -0.22
Trim47-201ENSMUST00000021120 Gm10320E9PW43 113 aa13.64□□□□□ -0.23
Trim47-201ENSMUST00000021120 Igkv8-27A0A0G2JF28 120 aa13.64□□□□□ -0.23
Trim47-201ENSMUST00000021120 Igkv8-30A0A140T8M3 121 aa13.64□□□□□ -0.23
Trim47-201ENSMUST00000021120 A530084C06RikQ3UTW2 186 aa13.64□□□□□ -0.23
Trim47-201ENSMUST00000021120 Csmd3Q80T79 3707 aa13.63□□□□□ -0.23
Trim47-201ENSMUST00000021120 Trav13-2A0A075B649 110 aa13.63□□□□□ -0.23
Trim47-201ENSMUST00000021120 Cox7bP56393 80 aa13.63□□□□□ -0.23
Trim47-201ENSMUST00000021120 BikO70337 150 aa13.62□□□□□ -0.23
Trim47-201ENSMUST00000021120 4930535I16RikQ9CUI2 172 aa13.62□□□□□ -0.23
Trim47-201ENSMUST00000021120 Igkv8-26A0A075B5N5 123 aa13.62□□□□□ -0.23
Trim47-201ENSMUST00000021120 Ighv2-5A0A0A6YY69 116 aa13.62□□□□□ -0.23
Trim47-201ENSMUST00000021120 Tcl1b5P56845 121 aa13.62□□□□□ -0.23
Trim47-201ENSMUST00000021120 Ubl5Q9EPV8 73 aa13.62□□□□□ -0.23
Trim47-201ENSMUST00000021120 Klk12B2RVZ0 247 aa13.61□□□□□ -0.23
Trim47-201ENSMUST00000021120 Igkv3-9A0A140T8P4 119 aa13.6□□□□□ -0.23
Trim47-201ENSMUST00000021120 Trav9n-4A0A075B631 113 aa13.6□□□□□ -0.23
Trim47-201ENSMUST00000021120 Gm9508A0A1W2P7W0 230 aa13.6□□□□□ -0.23
Trim47-201ENSMUST00000021120 Snhg11Q4G0K9 87 aa13.59□□□□□ -0.23
Trim47-201ENSMUST00000021120 Fam229bQ8CF36 80 aa13.58□□□□□ -0.24
Trim47-201ENSMUST00000021120 Stab2Q8R4U0 2559 aa13.58□□□□□ -0.24
Trim47-201ENSMUST00000021120 Ighv10-1A0A0B4J1J6 119 aa13.58□□□□□ -0.24
Trim47-201ENSMUST00000021120 2010109I03RikQ9CQ11 111 aa13.57□□□□□ -0.24
Trim47-201ENSMUST00000021120 Defa27F2Z403 93 aa13.56□□□□□ -0.24
Trim47-201ENSMUST00000021120 Reg3bP35230 175 aa13.55□□□□□ -0.24
Trim47-201ENSMUST00000021120 Gm10518F6UQQ9 182 aa13.54□□□□□ -0.24
Trim47-201ENSMUST00000021120 UqcrqQ9CQ69 82 aa13.54□□□□□ -0.24
Trim47-201ENSMUST00000021120 Igkv3-1A0A075B5P1 119 aa13.54□□□□□ -0.24
Trim47-201ENSMUST00000021120 Vpreb2P13373 142 aa13.54□□□□□ -0.24
Trim47-201ENSMUST00000021120 Igkv4-58A0A0G2JGI6 119 aa13.53□□□□□ -0.24
Trim47-201ENSMUST00000021120 Gm9805F6YK59 57 aa13.53□□□□□ -0.24
Trim47-201ENSMUST00000021120 Gm10770F7D043 238 aa13.53□□□□□ -0.24
Trim47-201ENSMUST00000021120 Rbm3O89086 153 aaKnown RBP13.52□□□□□ -0.24
Trim47-201ENSMUST00000021120 Prh1P05142 261 aa13.52□□□□□ -0.24
Trim47-201ENSMUST00000021120 Huwe1Q7TMY8 4377 aaKnown RBP13.52□□□□□ -0.25
Trim47-201ENSMUST00000021120 Gm28374F6SG70 93 aa13.52□□□□□ -0.25
Trim47-201ENSMUST00000021120 Dnah17Q69Z23 4481 aa13.51□□□□□ -0.25
Trim47-201ENSMUST00000021120 Gm17509Q9CZ61 145 aa13.5□□□□□ -0.25
Trim47-201ENSMUST00000021120 MplkipQ9D011 178 aa13.49□□□□□ -0.25
Trim47-201ENSMUST00000021120 Igkv8-16A0A0G2JDG9 121 aa13.48□□□□□ -0.25
Trim47-201ENSMUST00000021120 Defa28D3Z1V9 94 aa13.48□□□□□ -0.25
Trim47-201ENSMUST00000021120 Igkv1-110A0A0B4J1I0 119 aa13.48□□□□□ -0.25
Trim47-201ENSMUST00000021120 Dnah7bL7N1Y0 4068 aa13.48□□□□□ -0.25
Trim47-201ENSMUST00000021120 Wfdc12Q9JHY3 85 aa13.47□□□□□ -0.25
Trim47-201ENSMUST00000021120 Reg3dQ9QUS9 175 aa13.47□□□□□ -0.25
Trim47-201ENSMUST00000021120 Pde6gP09174 87 aa13.47□□□□□ -0.25
Trim47-201ENSMUST00000021120 A930002H24RikQ8C8Y3 163 aa13.47□□□□□ -0.25
Trim47-201ENSMUST00000021120 9530003J23RikQ8BM26 151 aa13.46□□□□□ -0.25
Trim47-201ENSMUST00000021120 A730071L15RikQ8C4X0 137 aa13.45□□□□□ -0.26
Trim47-201ENSMUST00000021120 AY074887Q8R5F9 132 aa13.45□□□□□ -0.26
Trim47-201ENSMUST00000021120 Ighv2-2A0A075B5P8 116 aa13.44□□□□□ -0.26
Trim47-201ENSMUST00000021120 Igkv8-24A0A140T8P5 121 aa13.44□□□□□ -0.26
Trim47-201ENSMUST00000021120 P01821 116 aa13.44□□□□□ -0.26
Trim47-201ENSMUST00000021120 Msrb1Q9JLC3 116 aa13.44□□□□□ -0.26
Trim47-201ENSMUST00000021120 Krtap11-1E9Q2E9 183 aa13.43□□□□□ -0.26
Trim47-201ENSMUST00000021120 Fam19a3Q7TPG6 132 aa13.42□□□□□ -0.26
Trim47-201ENSMUST00000021120 Cd164Q9R0L9 197 aa13.41□□□□□ -0.26
Trim47-201ENSMUST00000021120 A830005F24RikQ8BRT5 167 aa13.41□□□□□ -0.26
Trim47-201ENSMUST00000021120 PrkdcP97313 4128 aa13.41□□□□□ -0.26
Trim47-201ENSMUST00000021120 Gm17689B3GLJ4 109 aa13.4□□□□□ -0.26
Trim47-201ENSMUST00000021120 Spink8Q09TK9 105 aa13.39□□□□□ -0.27
Trim47-201ENSMUST00000021120 Dnah1E9Q8T7 4250 aa13.38□□□□□ -0.27
Trim47-201ENSMUST00000021120 Gm10401E9Q3K6 71 aa13.38□□□□□ -0.27
Trim47-201ENSMUST00000021120 Spint4Q9D263 159 aa13.38□□□□□ -0.27
Trim47-201ENSMUST00000021120 2310061N02RikQ9D6S9 174 aa13.37□□□□□ -0.27
Trim47-201ENSMUST00000021120 2310034G01RikA0A286YDL3 209 aa13.37□□□□□ -0.27
Trim47-201ENSMUST00000021120 Ccdc179J3QM76 67 aa13.37□□□□□ -0.27
Trim47-201ENSMUST00000021120 Dync2h1Q45VK7 4306 aa13.37□□□□□ -0.27
Trim47-201ENSMUST00000021120 E130218I03RikA0A0U1RNU5 63 aa13.36□□□□□ -0.27
Trim47-201ENSMUST00000021120 Gm10570F6VB42 170 aa13.35□□□□□ -0.27
Trim47-201ENSMUST00000021120 Gm9507D3Z5T3 223 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 83 ms