RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 Reg3dQ9QUS9 175 aa7.5□□□□□ -1.21
Ift88-201ENSMUST00000122063 Klk12B2RVZ0 247 aa7.49□□□□□ -1.21
Ift88-201ENSMUST00000122063 Ighv8-11A0A075B5X4 119 aa7.49□□□□□ -1.21
Ift88-201ENSMUST00000122063 C530025M09RikF6RGA8 229 aa7.49□□□□□ -1.21
Ift88-201ENSMUST00000122063 E130114P18RikF6S0S7 154 aa7.49□□□□□ -1.21
Ift88-201ENSMUST00000122063 Sprr1bQ62267 153 aa7.49□□□□□ -1.21
Ift88-201ENSMUST00000122063 Trav14d-3-dv8A0A075B619 120 aa7.48□□□□□ -1.21
Ift88-201ENSMUST00000122063 Ighv2-9-1A0A075B697 116 aa7.48□□□□□ -1.21
Ift88-201ENSMUST00000122063 Gm36176A0A1W2P8D5 158 aa7.48□□□□□ -1.21
Ift88-201ENSMUST00000122063 A0A286YCN5 57 aa7.48□□□□□ -1.21
Ift88-201ENSMUST00000122063 Reg3bP35230 175 aa7.48□□□□□ -1.21
Ift88-201ENSMUST00000122063 Igkv8-18A0A0B4J1J3 123 aa7.47□□□□□ -1.21
Ift88-201ENSMUST00000122063 Gm5142Q8C5X9 133 aa7.47□□□□□ -1.21
Ift88-201ENSMUST00000122063 Ighv8-13A0A075B5Y0 101 aa7.47□□□□□ -1.21
Ift88-201ENSMUST00000122063 Rpl39lQ9CQD0 51 aa7.47□□□□□ -1.21
Ift88-201ENSMUST00000122063 Gm867A0A1W2P7T4 151 aa7.46□□□□□ -1.21
Ift88-201ENSMUST00000122063 Klk9Q32M27 251 aa7.46□□□□□ -1.21
Ift88-201ENSMUST00000122063 Igkv2-109A0A075B5K6 120 aa7.46□□□□□ -1.22
Ift88-201ENSMUST00000122063 Smim26Q3V460 107 aa7.46□□□□□ -1.22
Ift88-201ENSMUST00000122063 Ighv1-56A0A0A6YXG2 117 aa7.45□□□□□ -1.22
Ift88-201ENSMUST00000122063 EnhoQ8K1D8 76 aa7.45□□□□□ -1.22
Ift88-201ENSMUST00000122063 Hbb-b2P02089 147 aa7.44□□□□□ -1.22
Ift88-201ENSMUST00000122063 Rpl18aP62717 176 aaKnown RBP7.44□□□□□ -1.22
Ift88-201ENSMUST00000122063 E130218I03RikA0A0U1RNU5 63 aa7.44□□□□□ -1.22
Ift88-201ENSMUST00000122063 Gm5153P01627 120 aa7.44□□□□□ -1.22
Ift88-201ENSMUST00000122063 Snhg11Q4G0K9 87 aa7.44□□□□□ -1.22
Ift88-201ENSMUST00000122063 Psors1c2Q80ZC9 134 aa7.44□□□□□ -1.22
Ift88-201ENSMUST00000122063 Sslp1Q3UN54 99 aa7.43□□□□□ -1.22
Ift88-201ENSMUST00000122063 Pcp4P63054 62 aa7.43□□□□□ -1.22
Ift88-201ENSMUST00000122063 Xcl1P47993 114 aa7.42□□□□□ -1.22
Ift88-201ENSMUST00000122063 Igkv4-58A0A0G2JGI6 119 aa7.41□□□□□ -1.22
Ift88-201ENSMUST00000122063 Defa1P11477 93 aa7.41□□□□□ -1.22
Ift88-201ENSMUST00000122063 Defa2P28309 93 aa7.41□□□□□ -1.22
Ift88-201ENSMUST00000122063 Igkv1-88A0A140T8N1 120 aa7.41□□□□□ -1.22
Ift88-201ENSMUST00000122063 Acyp1P56376 99 aa7.41□□□□□ -1.22
Ift88-201ENSMUST00000122063 Ufsp1Q9CZP0 217 aa7.41□□□□□ -1.22
Ift88-201ENSMUST00000122063 Trav3-4A0A075B654 114 aa7.4□□□□□ -1.22
Ift88-201ENSMUST00000122063 Phxr5P08399 672 aa7.4□□□□□ -1.22
Ift88-201ENSMUST00000122063 Defa4P28311 92 aa7.4□□□□□ -1.22
Ift88-201ENSMUST00000122063 Gm11213A0A1B0GR83 88 aa7.39□□□□□ -1.23
Ift88-201ENSMUST00000122063 A730009L09RikA0A1B0GS82 72 aa7.39□□□□□ -1.23
Ift88-201ENSMUST00000122063 Gm9805F6YK59 57 aa7.39□□□□□ -1.23
Ift88-201ENSMUST00000122063 Gm10845Q3UNY9 185 aa7.39□□□□□ -1.23
Ift88-201ENSMUST00000122063 MrapQ9D159 127 aa7.39□□□□□ -1.23
Ift88-201ENSMUST00000122063 Cox7b2Q9D2H1 82 aa7.38□□□□□ -1.23
Ift88-201ENSMUST00000122063 4930556J24RikQ9D4U7 146 aa7.38□□□□□ -1.23
Ift88-201ENSMUST00000122063 E130208F15RikQ3UPV3 143 aa7.37□□□□□ -1.23
Ift88-201ENSMUST00000122063 1810062G17RikG3X8Y2 129 aa7.37□□□□□ -1.23
Ift88-201ENSMUST00000122063 Cox7bP56393 80 aa7.37□□□□□ -1.23
Ift88-201ENSMUST00000122063 Tcl1b3P56842 122 aa7.37□□□□□ -1.23
Ift88-201ENSMUST00000122063 4930535I16RikQ9CUI2 172 aa7.37□□□□□ -1.23
Ift88-201ENSMUST00000122063 Ube2d4D3YUH6 135 aa7.36□□□□□ -1.23
Ift88-201ENSMUST00000122063 Camk2n2Q78WH7 79 aa7.36□□□□□ -1.23
Ift88-201ENSMUST00000122063 Tmem213Q08EA8 116 aa7.36□□□□□ -1.23
Ift88-201ENSMUST00000122063 Wfdc17Q5SSJ1 76 aa7.36□□□□□ -1.23
Ift88-201ENSMUST00000122063 Igsf10Q3V1M1 2594 aa7.36□□□□□ -1.23
Ift88-201ENSMUST00000122063 Gm10320E9PW43 113 aa7.36□□□□□ -1.23
Ift88-201ENSMUST00000122063 Gm17577J3QNF7 156 aa7.35□□□□□ -1.23
Ift88-201ENSMUST00000122063 Atp5eP56382 52 aa7.35□□□□□ -1.23
Ift88-201ENSMUST00000122063 Ifitm6A0A1B0GS75 124 aa7.35□□□□□ -1.23
Ift88-201ENSMUST00000122063 Prr13Q9CQJ5 137 aa7.34□□□□□ -1.23
Ift88-201ENSMUST00000122063 P01819 144 aa7.34□□□□□ -1.23
Ift88-201ENSMUST00000122063 AplnQ9R0R4 77 aa7.34□□□□□ -1.23
Ift88-201ENSMUST00000122063 Dnah10D3YYQ8 4591 aa7.34□□□□□ -1.23
Ift88-201ENSMUST00000122063 Defa16P50714 93 aa7.33□□□□□ -1.24
Ift88-201ENSMUST00000122063 Cdk2ap2Q9CPY4 127 aa7.33□□□□□ -1.24
Ift88-201ENSMUST00000122063 Gm17509Q9CZ61 145 aa7.33□□□□□ -1.24
Ift88-201ENSMUST00000122063 9430015G10RikA2ASP7 199 aa7.33□□□□□ -1.24
Ift88-201ENSMUST00000122063 Ighv2-9A0A075B5Q5 116 aa7.33□□□□□ -1.24
Ift88-201ENSMUST00000122063 Lamtor3O88653 124 aa7.33□□□□□ -1.24
Ift88-201ENSMUST00000122063 BB014433Q8C5R5 389 aa7.32□□□□□ -1.24
Ift88-201ENSMUST00000122063 AY074887Q8R5F9 132 aa7.32□□□□□ -1.24
Ift88-201ENSMUST00000122063 Tcl1b5P56845 121 aa7.32□□□□□ -1.24
Ift88-201ENSMUST00000122063 D130052B06RikQ3UW13 202 aa7.32□□□□□ -1.24
Ift88-201ENSMUST00000122063 Igf1P05017 153 aa7.31□□□□□ -1.24
Ift88-201ENSMUST00000122063 Csdc2Q91YQ3 154 aa7.31□□□□□ -1.24
Ift88-201ENSMUST00000122063 Pkd1l1Q8R526 2615 aa7.31□□□□□ -1.24
Ift88-201ENSMUST00000122063 MplkipQ9D011 178 aa7.31□□□□□ -1.24
Ift88-201ENSMUST00000122063 Gm9903Q8C9Y8 129 aa7.3□□□□□ -1.24
Ift88-201ENSMUST00000122063 Gm16181B0V2H2 73 aa7.3□□□□□ -1.24
Ift88-201ENSMUST00000122063 Igkv4-92A0A0B4J1I2 117 aa7.29□□□□□ -1.24
Ift88-201ENSMUST00000122063 Ighv10-1A0A0B4J1J6 119 aa7.29□□□□□ -1.24
Ift88-201ENSMUST00000122063 Defb37Q7TMD2 62 aa7.29□□□□□ -1.24
Ift88-201ENSMUST00000122063 Q9DAA7 145 aa7.29□□□□□ -1.24
Ift88-201ENSMUST00000122063 6430550D23RikE9Q1X6 194 aa7.29□□□□□ -1.24
Ift88-201ENSMUST00000122063 Msrb1Q9JLC3 116 aa7.29□□□□□ -1.24
Ift88-201ENSMUST00000122063 Cd164Q9R0L9 197 aa7.29□□□□□ -1.24
Ift88-201ENSMUST00000122063 Igkv1-122A0A140T8M9 119 aa7.29□□□□□ -1.24
Ift88-201ENSMUST00000122063 CnbpP53996 178 aaKnown RBP7.29□□□□□ -1.24
Ift88-201ENSMUST00000122063 Hist1h4aP62806 103 aaKnown RBP7.29□□□□□ -1.24
Ift88-201ENSMUST00000122063 Igkv8-26A0A075B5N5 123 aa7.28□□□□□ -1.24
Ift88-201ENSMUST00000122063 Trav14-1A0A0G2JF94 121 aa7.28□□□□□ -1.24
Ift88-201ENSMUST00000122063 Gm16485Q8C4B7 115 aa7.28□□□□□ -1.24
Ift88-201ENSMUST00000122063 Defa25Q5G864 92 aa7.28□□□□□ -1.24
Ift88-201ENSMUST00000122063 Kmt2aP55200 3966 aa7.27□□□□□ -1.24
Ift88-201ENSMUST00000122063 Stab2Q8R4U0 2559 aa7.27□□□□□ -1.25
Ift88-201ENSMUST00000122063 2310034G01RikA0A286YDL3 209 aa7.27□□□□□ -1.25
Ift88-201ENSMUST00000122063 Sprr4Q8CGN8 76 aa7.27□□□□□ -1.25
Ift88-201ENSMUST00000122063 Defb10Q8R2I8 73 aa7.27□□□□□ -1.25
Ift88-201ENSMUST00000122063 Znf414Q9DCK4 299 aa7.27□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms