RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 B230307C23RikQ8BLB2 64 aa17.57■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Ighv13-2A0A0A6YWN3 119 aa17.56■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Cox7bP56393 80 aa17.56■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 2010109I03RikQ9CQ11 111 aa17.56■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 4930556J24RikQ9D4U7 146 aa17.55■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Trav9n-4A0A075B631 113 aa17.54■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Ccl21aP84444 133 aa17.53■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Ccl21bP86792 133 aa17.53■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Ccl21cP86793 133 aa17.53■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Defb26Q30KN7 186 aa17.53■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Igfn1Q3KNY0 2849 aa17.53■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Ighv10-1A0A0B4J1J6 119 aa17.53■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Igkv4-58A0A0G2JGI6 119 aa17.52■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Chd8Q09XV5 2582 aaKnown RBP17.52■□□□□ 0.4
Ccdc9-202ENSMUST00000118976 Ndufc1Q9CQY9 76 aa17.52■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Igkv4-61A0A0G2JH00 117 aa17.51■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 E130114P18RikF6S0S7 154 aa17.5■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Prh1P05142 261 aa17.5■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Gm10518F6UQQ9 182 aa17.5■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Tcl1b5P56845 121 aa17.49■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Brk1Q91VR8 75 aa17.49■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Ankrd11E9Q4F7 2643 aa17.48■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Igkv1-110A0A0B4J1I0 119 aa17.48■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Nbeal1E9PYP2 2688 aa17.48■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Igkv4-54A0A0G2JES9 117 aa17.47■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Gm9805F6YK59 57 aa17.47■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Lamtor3O88653 124 aa17.46■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 C2cd3Q52KB6 2323 aa17.46■□□□□ 0.39
Ccdc9-202ENSMUST00000118976 Wnk1P83741 2377 aa17.45■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 PrcdQ00LT2 53 aa17.45■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 Trbv13-2A0A140T8N6 113 aa17.45■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 Igkv8-16A0A0G2JDG9 121 aa17.44■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 BikO70337 150 aa17.43■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 BaalcQ8VHV1 145 aa17.43■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 Reg3dQ9QUS9 175 aa17.43■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 9530003J23RikQ8BM26 151 aa17.42■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 Wfdc12Q9JHY3 85 aa17.42■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 Gm10770F7D043 238 aa17.41■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 Ly6c2P0CW03 131 aa17.41■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 Abca12E9Q876 2595 aa17.41■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 Igkv3-9A0A140T8P4 119 aa17.4■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 Serp1Q9Z1W5 66 aa17.4■□□□□ 0.38
Ccdc9-202ENSMUST00000118976 Myo9aQ8C170 2542 aa17.39■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Pde6gP09174 87 aa17.39■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Fam19a3Q7TPG6 132 aa17.39■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 SnurfQ9WU12 71 aa17.39■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Rbm3O89086 153 aaKnown RBP17.39■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Gm17689B3GLJ4 109 aa17.38■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 CrygeQ03740 174 aa17.38■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 A830005F24RikQ8BRT5 167 aa17.38■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 A730071L15RikQ8C4X0 137 aa17.38■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Higd2aQ9CQJ1 106 aa17.38■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Msrb1Q9JLC3 116 aa17.38■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Cd99Q8VCN6 175 aa17.37■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Nf1Q04690 2841 aa17.37■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Zfyve26Q5DU37 2529 aa17.36■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Igkv8-24A0A140T8P5 121 aa17.36■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Ighv2-2A0A075B5P8 116 aa17.36■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 P01821 116 aa17.36■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Igkv8-34A0A0G2JDU0 121 aa17.34■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Ankrd17Q99NH0 2603 aaKnown RBP17.34■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 Vpreb1P13372 142 aa17.33■□□□□ 0.37
Ccdc9-202ENSMUST00000118976 E130218I03RikA0A0U1RNU5 63 aa17.32■□□□□ 0.36
Ccdc9-202ENSMUST00000118976 Xirp2Q4U4S6 3784 aa17.31■□□□□ 0.36
Ccdc9-202ENSMUST00000118976 AY074887Q8R5F9 132 aa17.3■□□□□ 0.36
Ccdc9-202ENSMUST00000118976 Gm10337F7DEP7 55 aa17.3■□□□□ 0.36
Ccdc9-202ENSMUST00000118976 Klk9Q32M27 251 aa17.29■□□□□ 0.36
Ccdc9-202ENSMUST00000118976 Krtap11-1E9Q2E9 183 aa17.29■□□□□ 0.36
Ccdc9-202ENSMUST00000118976 Defa20Q45VN2 95 aa17.29■□□□□ 0.36
Ccdc9-202ENSMUST00000118976 Tep1P97499 2629 aa17.29■□□□□ 0.36
Ccdc9-202ENSMUST00000118976 Rif1Q6PR54 2419 aaKnown RBP17.28■□□□□ 0.36
Ccdc9-202ENSMUST00000118976 Bahcc1Q3UHR0 2643 aa17.26■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 Muc2Q80Z19 2680 aa17.25■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 Akap13E9Q394 2776 aa17.25■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 2310034G01RikA0A286YDL3 209 aa17.25■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 Pet100P0DJE0 76 aa17.25■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 Defb2P82020 71 aa17.23■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 Dph3Q8K0W9 82 aa17.23■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 Defa27F2Z403 93 aa17.22■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 Q8R092 253 aa17.22■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 Leap2Q91V13 76 aa17.22■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 Pdzd2E9Q1M1 2796 aa17.21■□□□□ 0.35
Ccdc9-202ENSMUST00000118976 Mrpl55Q9CZ83 127 aa17.2■□□□□ 0.34
Ccdc9-202ENSMUST00000118976 CubnQ9JLB4 3623 aa17.2■□□□□ 0.34
Ccdc9-202ENSMUST00000118976 Igkv8-28A0A0G2JE47 121 aa17.19■□□□□ 0.34
Ccdc9-202ENSMUST00000118976 BsnO88737 3942 aa17.18■□□□□ 0.34
Ccdc9-202ENSMUST00000118976 Elof1P60003 83 aa17.17■□□□□ 0.34
Ccdc9-202ENSMUST00000118976 UqcrqQ9CQ69 82 aa17.16■□□□□ 0.34
Ccdc9-202ENSMUST00000118976 Ank2Q8C8R3 3898 aa17.16■□□□□ 0.34
Ccdc9-202ENSMUST00000118976 Gm17509Q9CZ61 145 aa17.16■□□□□ 0.34
Ccdc9-202ENSMUST00000118976 P06320 134 aa17.15■□□□□ 0.34
Ccdc9-202ENSMUST00000118976 Dad1P61804 113 aa17.14■□□□□ 0.33
Ccdc9-202ENSMUST00000118976 Gm11213A0A1B0GR83 88 aa17.13■□□□□ 0.33
Ccdc9-202ENSMUST00000118976 Igkv4-92A0A0B4J1I2 117 aa17.12■□□□□ 0.33
Ccdc9-202ENSMUST00000118976 D730001G18RikA0A087WQU7 115 aa17.11■□□□□ 0.33
Ccdc9-202ENSMUST00000118976 A530084C06RikQ3UTW2 186 aa17.11■□□□□ 0.33
Ccdc9-202ENSMUST00000118976 BC048502Q80Y74 154 aa17.11■□□□□ 0.33
Ccdc9-202ENSMUST00000118976 Mast4Q811L6 2618 aa17.11■□□□□ 0.33
Ccdc9-202ENSMUST00000118976 H2al1bA0A087WP11 105 aa17.11■□□□□ 0.33
Ccdc9-202ENSMUST00000118976 H2al1kJ3QP08 105 aa17.11■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 111.4 ms