RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Gm28230A0A0A0MQ91 144 aa11,55□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Ly6c2P0CW03 131 aa11,55□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Gm17509Q9CZ61 145 aa11,55□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Igkv3-7A0A0G2JE31 119 aa11,55□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Gm9903Q8C9Y8 129 aa11,55□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Gm9922Q8C3P1 144 aa11,54□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Gm9913Q8BQQ2 135 aa11,54□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Dopey1Q8BL99 2399 aa11,53□□□□□ -0,56
Col17a1-202ENSMUST00000086923 SycnQ8VCK7 134 aa11,53□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Flg2Q2VIS4 2362 aa11,52□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Ighv2-9A0A075B5Q5 116 aa11,52□□□□□ -0,56
Col17a1-202ENSMUST00000086923 Wfdc15aQ8BH89 80 aa11,52□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Gm5617Q91VN2 117 aa11,52□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Wfdc6bF6ULY1 148 aa11,51□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Wdr90Q6ZPG2 1874 aa11,5□□□□□ -0,57
Col17a1-202ENSMUST00000086923 A730009L09RikA0A1B0GS82 72 aa11,5□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Kiaa1549Q68FD9 1940 aa11,5□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Gm21886J3QJU9 214 aa11,5□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Eif4ebp3Q80VV3 101 aa11,49□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Gm44790A0A0N4SV91 103 aa11,48□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Wfdc3Q14AE4 130 aa11,48□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Znf706Q9D115 76 aaKnown RBP11,48□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Gm12216A0A1W2P827 62 aa11,48□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Igkv8-19A0A0G2JFN8 121 aa11,46□□□□□ -0,57
Col17a1-202ENSMUST00000086923 Pcsk5Q04592 1877 aa11,46□□□□□ -0,57
Col17a1-202ENSMUST00000086923 A930009A15RikG3UYI6 118 aa11,46□□□□□ -0,58
Col17a1-202ENSMUST00000086923 1700018G05RikA0A1B0GSI2 66 aa11,45□□□□□ -0,58
Col17a1-202ENSMUST00000086923 Gm10770F7D043 238 aa11,43□□□□□ -0,58
Col17a1-202ENSMUST00000086923 BC067074F6RXI4 2391 aa11,42□□□□□ -0,58
Col17a1-202ENSMUST00000086923 PolqQ8CGS6 2544 aa11,41□□□□□ -0,58
Col17a1-202ENSMUST00000086923 Wfdc17Q5SSJ1 76 aa11,41□□□□□ -0,58
Col17a1-202ENSMUST00000086923 Hivep2Q3UHF7 2430 aa11,41□□□□□ -0,58
Col17a1-202ENSMUST00000086923 Chchd10Q7TNL9 138 aa11,4□□□□□ -0,58
Col17a1-202ENSMUST00000086923 Myo9aQ8C170 2542 aa11,4□□□□□ -0,58
Col17a1-202ENSMUST00000086923 Elof1P60003 83 aa11,39□□□□□ -0,59
Col17a1-202ENSMUST00000086923 Gm3443F7CCV5 94 aa11,38□□□□□ -0,59
Col17a1-202ENSMUST00000086923 CrygaP04345 174 aa11,37□□□□□ -0,59
Col17a1-202ENSMUST00000086923 Ankhd1E9PUR0 2548 aaKnown RBP11,37□□□□□ -0,59
Col17a1-202ENSMUST00000086923 Mp68P56379 58 aa11,37□□□□□ -0,59
Col17a1-202ENSMUST00000086923 PscaP57096 123 aa11,37□□□□□ -0,59
Col17a1-202ENSMUST00000086923 CnbpP53996 178 aaKnown RBP11,36□□□□□ -0,59
Col17a1-202ENSMUST00000086923 MobpQ9D2P8 170 aa11,36□□□□□ -0,59
Col17a1-202ENSMUST00000086923 1810062G17RikG3X8Y2 129 aa11,35□□□□□ -0,59
Col17a1-202ENSMUST00000086923 Zfyve26Q5DU37 2529 aa11,34□□□□□ -0,59
Col17a1-202ENSMUST00000086923 Fam229bQ8CF36 80 aa11,33□□□□□ -0,6
Col17a1-202ENSMUST00000086923 OtoglF7A4A7 2325 aa11,32□□□□□ -0,6
Col17a1-202ENSMUST00000086923 Prr9Q8BV84 116 aa11,32□□□□□ -0,6
Col17a1-202ENSMUST00000086923 Lrp4Q8VI56 1905 aa11,32□□□□□ -0,6
Col17a1-202ENSMUST00000086923 SrcapA0A087WQ44 3271 aa11,31□□□□□ -0,6
Col17a1-202ENSMUST00000086923 U90926O08546 118 aa11,3□□□□□ -0,6
Col17a1-202ENSMUST00000086923 Rpl37aP61514 92 aa11,29□□□□□ -0,6
Col17a1-202ENSMUST00000086923 Abca2P41234 2434 aa11,28□□□□□ -0,6
Col17a1-202ENSMUST00000086923 Igkv8-28A0A0G2JE47 121 aa11,28□□□□□ -0,6
Col17a1-202ENSMUST00000086923 AplnQ9R0R4 77 aa11,28□□□□□ -0,6
Col17a1-202ENSMUST00000086923 D730001G18RikA0A087WQU7 115 aa11,28□□□□□ -0,6
Col17a1-202ENSMUST00000086923 Gm10999F6Q4M4 69 aa11,27□□□□□ -0,6
Col17a1-202ENSMUST00000086923 Phxr5P08399 672 aa11,27□□□□□ -0,6
Col17a1-202ENSMUST00000086923 Gm43218A0A0G2JGT0 114 aa11,27□□□□□ -0,61
Col17a1-202ENSMUST00000086923 A930002H24RikQ8C8Y3 163 aa11,27□□□□□ -0,61
Col17a1-202ENSMUST00000086923 Znf575Q3TXZ1 239 aa11,27□□□□□ -0,61
Col17a1-202ENSMUST00000086923 Piezo2Q8CD54 2822 aa11,27□□□□□ -0,61
Col17a1-202ENSMUST00000086923 Pla2g2cP48076 150 aa11,26□□□□□ -0,61
Col17a1-202ENSMUST00000086923 Nupr2Q497P3 102 aa11,25□□□□□ -0,61
Col17a1-202ENSMUST00000086923 Ighv8-13A0A075B5Y0 101 aa11,25□□□□□ -0,61
Col17a1-202ENSMUST00000086923 Uqcr11Q9CPX8 56 aa11,24□□□□□ -0,61
Col17a1-202ENSMUST00000086923 Gm9767G3X930 207 aa11,22□□□□□ -0,61
Col17a1-202ENSMUST00000086923 Gm16485Q8C4B7 115 aa11,2□□□□□ -0,62
Col17a1-202ENSMUST00000086923 Dmac1Q9CQ00 111 aa11,19□□□□□ -0,62
Col17a1-202ENSMUST00000086923 Q8BGJ3 129 aa11,19□□□□□ -0,62
Col17a1-202ENSMUST00000086923 Q8BT88 171 aa11,19□□□□□ -0,62
Col17a1-202ENSMUST00000086923 Gm10837Q3UTT8 145 aa11,18□□□□□ -0,62
Col17a1-202ENSMUST00000086923 A330070K13RikQ8CA53 115 aa11,18□□□□□ -0,62
Col17a1-202ENSMUST00000086923 Golgb1E9PVZ8 3238 aa11,18□□□□□ -0,62
Col17a1-202ENSMUST00000086923 Defb1P56386 69 aa11,17□□□□□ -0,62
Col17a1-202ENSMUST00000086923 Defb50Q6TU36 73 aa11,16□□□□□ -0,62
Col17a1-202ENSMUST00000086923 Dmbt1Q60997 2085 aa11,14□□□□□ -0,63
Col17a1-202ENSMUST00000086923 Defb39Q70KL3 74 aa11,13□□□□□ -0,63
Col17a1-202ENSMUST00000086923 RetnlbQ99P86 105 aa11,13□□□□□ -0,63
Col17a1-202ENSMUST00000086923 Gm17606F6ZL36 78 aa11,12□□□□□ -0,63
Col17a1-202ENSMUST00000086923 Pkd1l2Q7TN88 2461 aa11,12□□□□□ -0,63
Col17a1-202ENSMUST00000086923 Adm2Q7TNK8 150 aa11,12□□□□□ -0,63
Col17a1-202ENSMUST00000086923 Gm9573F7C950 1606 aa11,11□□□□□ -0,63
Col17a1-202ENSMUST00000086923 Chtf8P0CG14 533 aa11,08□□□□□ -0,63
Col17a1-202ENSMUST00000086923 Gm11627A6PWP4 55 aa11,08□□□□□ -0,64
Col17a1-202ENSMUST00000086923 Lce6aD3YV94 81 aa11,08□□□□□ -0,64
Col17a1-202ENSMUST00000086923 Gm10772F7AIG4 85 aa11,07□□□□□ -0,64
Col17a1-202ENSMUST00000086923 Tln1P26039 2541 aaKnown RBP11,07□□□□□ -0,64
Col17a1-202ENSMUST00000086923 4930507D05RikQ8C9C9 103 aa11,05□□□□□ -0,64
Col17a1-202ENSMUST00000086923 Cystm1Q8K353 104 aa11,05□□□□□ -0,64
Col17a1-202ENSMUST00000086923 Col4a4Q9QZR9 1682 aa11,04□□□□□ -0,64
Col17a1-202ENSMUST00000086923 Bri3P28662 125 aa11,03□□□□□ -0,64
Col17a1-202ENSMUST00000086923 Zfp462B1AWL2 2495 aaKnown RBP11,02□□□□□ -0,64
Col17a1-202ENSMUST00000086923 Ttc28Q80XJ3 2450 aa11,01□□□□□ -0,65
Col17a1-202ENSMUST00000086923 Rnase13Q5GAM7 153 aa11□□□□□ -0,65
Col17a1-202ENSMUST00000086923 AY074887Q8R5F9 132 aa11□□□□□ -0,65
Col17a1-202ENSMUST00000086923 SmcpP15265 143 aa10,98□□□□□ -0,65
Col17a1-202ENSMUST00000086923 Cypt15B1AXS0 87 aa10,98□□□□□ -0,65
Col17a1-202ENSMUST00000086923 Gm10642Q3TWM1 71 aa10,97□□□□□ -0,65
Col17a1-202ENSMUST00000086923 Gm26620Q9CY65 116 aa10,97□□□□□ -0,65
Col17a1-202ENSMUST00000086923 Krtap26-1Q9D7N2 215 aa10,97□□□□□ -0,65
Retrieved 100 of 22,080 RNA–protein pairs in 44,8 ms