RNA–Protein interactions for RNA: ENSMUST00000068378.5

Cntn1-202, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 3,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-202ENSMUST00000068378 Igkv4-59A0A0B4J1I8 117 aa4.94□□□□□ -1.62
Cntn1-202ENSMUST00000068378 AcacaQ5SWU9 2345 aa4.94□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Usp24B1AY13 2617 aaKnown RBP4.94□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Spink4O35679 86 aa4.94□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Cacna1aP97445 2368 aa4.94□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Gm12216A0A1W2P827 62 aa4.94□□□□□ -1.62
Cntn1-202ENSMUST00000068378 P18532 116 aa4.94□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Odf1Q61999 247 aa4.94□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Chd8Q09XV5 2582 aaKnown RBP4.93□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Igkv3-1A0A075B5P1 119 aa4.93□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Igkv4-70A0A0B4J1I5 116 aa4.93□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Igkv1-99F6XWB2 120 aa4.93□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Ankrd11E9Q4F7 2643 aa4.93□□□□□ -1.62
Cntn1-202ENSMUST00000068378 AcacbE9Q4Z2 2448 aa4.93□□□□□ -1.62
Cntn1-202ENSMUST00000068378 CenpeQ6RT24 2474 aaKnown RBP4.92□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Ighv1-59A0A0A6YXE0 117 aa4.92□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Rnf5O35445 180 aa4.92□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Gm815Q3UWS2 115 aa4.92□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Gm17732E9Q5I2 61 aa4.92□□□□□ -1.62
Cntn1-202ENSMUST00000068378 E030018B13RikJ3QMS9 113 aa4.92□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Cdk2ap2Q9CPY4 127 aa4.92□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Ubr5Q80TP3 2792 aa4.91□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Fbn2Q61555 2907 aa4.91□□□□□ -1.62
Cntn1-202ENSMUST00000068378 D730001G18RikA0A087WQU7 115 aa4.91□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Sptbn4E9PX29 2561 aa4.91□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Coa5Q99M07 74 aa4.91□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Trav9n-4A0A075B631 113 aa4.9□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Cnep1r1Q3UJ81 125 aa4.9□□□□□ -1.62
Cntn1-202ENSMUST00000068378 2310034C09RikQ9D746 214 aa4.9□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Ighv3-3A0A0A6YWL2 116 aa4.9□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Gm10643Q3URG9 111 aa4.9□□□□□ -1.62
Cntn1-202ENSMUST00000068378 Igkv4-78A0A0A6YYE5 119 aa4.9□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Gm36368A0A1D5RLK8 91 aa4.9□□□□□ -1.63
Cntn1-202ENSMUST00000068378 LhbO09108 141 aa4.9□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Higd1cQ76I25 96 aa4.9□□□□□ -1.63
Cntn1-202ENSMUST00000068378 2310057N15RikQ9D6T8 200 aa4.9□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Gm9970F6ZED4 185 aa4.89□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Krtap24-1G3X9A2 248 aa4.89□□□□□ -1.63
Cntn1-202ENSMUST00000068378 U90926O08546 118 aa4.89□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Lynx1P0DP60 116 aa4.89□□□□□ -1.63
Cntn1-202ENSMUST00000068378 MobpQ9D2P8 170 aa4.89□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Coa6Q8BGD8 79 aa4.89□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Klk9Q32M27 251 aa4.89□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Prr9Q8BV84 116 aa4.89□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Prr15lQ8JZM2 100 aa4.89□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Sptan1P16546 2472 aaKnown RBP4.88□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Gm10770F7D043 238 aa4.88□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Ube2aQ9Z255 152 aa4.88□□□□□ -1.63
Cntn1-202ENSMUST00000068378 A730071L15RikQ8C4X0 137 aa4.88□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Dpm3Q9D1Q4 92 aa4.88□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Igkv6-15A0A140T8M5 115 aa4.88□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Dynlrb2Q9DAJ5 96 aa4.88□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Hectd1Q69ZR2 2618 aaKnown RBP4.87□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Cypt14J3QPF7 87 aa4.87□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Igkv4-79A0A075B5L8 119 aa4.87□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Ifitm1Q9D103 106 aa4.87□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Csmd3Q80T79 3707 aa4.86□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Sfta2E9PXB6 77 aa4.86□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Phxr4P15974 95 aa4.86□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Prop1P97458 223 aa4.86□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Defb26Q30KN7 186 aa4.86□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Utp20Q5XG71 2788 aaKnown RBP4.86□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Igkv4-58A0A0G2JGI6 119 aa4.86□□□□□ -1.63
Cntn1-202ENSMUST00000068378 NbasE9Q411 2356 aa4.86□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Igkv8-26A0A075B5N5 123 aa4.85□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Igkv4-92A0A0B4J1I2 117 aa4.85□□□□□ -1.63
Cntn1-202ENSMUST00000068378 C2cd3Q52KB6 2323 aa4.85□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Igkv8-18A0A0B4J1J3 123 aa4.85□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Trav9-4A0A0B4J1K2 113 aa4.85□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Igkv8-34A0A0G2JDU0 121 aa4.85□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Ccl3P10855 92 aa4.85□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Edn3P48299 214 aa4.85□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Cspg4Q8VHY0 2327 aa4.85□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Igkv4-57-1A0A075B5M4 119 aa4.84□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Igkv4-62A0A0G2JDW9 117 aa4.84□□□□□ -1.63
Cntn1-202ENSMUST00000068378 A330070K13RikQ8CA53 115 aa4.84□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Ptprz1B9EKR1 2312 aa4.84□□□□□ -1.63
Cntn1-202ENSMUST00000068378 Chchd10Q7TNL9 138 aa4.83□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Hivep3A2A884 2348 aa4.83□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Ep300B2RWS6 2412 aa4.83□□□□□ -1.64
Cntn1-202ENSMUST00000068378 SptssbQ925E8 76 aa4.83□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Igkv8-24A0A140T8P5 121 aa4.83□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Gm9767G3X930 207 aa4.83□□□□□ -1.64
Cntn1-202ENSMUST00000068378 P01738 130 aa4.83□□□□□ -1.64
Cntn1-202ENSMUST00000068378 9530003J23RikQ8BM26 151 aa4.83□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Gm17727E9Q4V7 109 aa4.82□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Ighv3-1A0A075B5S6 116 aa4.82□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Tff3Q62395 81 aa4.82□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Pla2g10Q9QXX3 151 aa4.82□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Gm10322F7D7I4 111 aa4.82□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Xirp2Q4U4S6 3784 aa4.81□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Trav9d-3A0A075B695 113 aa4.81□□□□□ -1.64
Cntn1-202ENSMUST00000068378 A930009A15RikG3UYI6 118 aa4.81□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Defb50Q6TU36 73 aa4.81□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Pkd1l2Q7TN88 2461 aa4.81□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Defb33Q30KN3 62 aa4.81□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Smim29Q8R043 75 aa4.81□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Tfpi2O35536 230 aa4.8□□□□□ -1.64
Cntn1-202ENSMUST00000068378 Spink1P09036 80 aa4.8□□□□□ -1.64
Cntn1-202ENSMUST00000068378 FshbQ60687 130 aa4.8□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 63.7 ms