RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Gm16181B0V2H2 73 aa5.58□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Unc80Q8BLN6 3261 aa5.58□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Krtap11-1E9Q2E9 183 aa5.57□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Wfdc15aQ8BH89 80 aa5.57□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Gm8251F6VUT6 1994 aa5.57□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Itgb4A2A863 1818 aa5.56□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Gm42715A0A087WP63 3095 aaKnown RBP5.56□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Cox6a2P43023 97 aa5.55□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Fer1l5P0DM40 2038 aa5.55□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Gm19410A0A140LJC7 2098 aa5.55□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Apc2Q9Z1K7 2274 aa5.55□□□□□ -1.52
Clcn3-202ENSMUST00000056508 RttnQ8R4Y8 2226 aa5.55□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Sbf1Q6ZPE2 1867 aa5.55□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Gm28230A0A0A0MQ91 144 aa5.54□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Krtap14O08640 167 aa5.54□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Col5a3Q9JLI2 1739 aa5.53□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Eml6Q5SQM0 1958 aa5.53□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Dnajc13D4AFX7 2248 aaKnown RBP5.53□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Dock10Q8BZN6 2150 aa5.52□□□□□ -1.52
Clcn3-202ENSMUST00000056508 Alpk2Q91ZB0 2144 aa5.52□□□□□ -1.53
Clcn3-202ENSMUST00000056508 Arfgef3Q3UGY8 2170 aa5.52□□□□□ -1.53
Clcn3-202ENSMUST00000056508 Wfdc17Q5SSJ1 76 aa5.51□□□□□ -1.53
Clcn3-202ENSMUST00000056508 PscaP57096 123 aa5.5□□□□□ -1.53
Clcn3-202ENSMUST00000056508 Rp1l1Q8CGM2 1859 aa5.49□□□□□ -1.53
Clcn3-202ENSMUST00000056508 Med13Q5SWW4 2171 aa5.49□□□□□ -1.53
Clcn3-202ENSMUST00000056508 SisF8VQM5 1818 aa5.48□□□□□ -1.53
Clcn3-202ENSMUST00000056508 PtprfA2A8L5 1898 aa5.48□□□□□ -1.53
Clcn3-202ENSMUST00000056508 Map1bP14873 2464 aaKnown RBP5.48□□□□□ -1.53
Clcn3-202ENSMUST00000056508 Tanc1Q0VGY8 1856 aa5.47□□□□□ -1.53
Clcn3-202ENSMUST00000056508 Pcnx3Q8VI59 2028 aa5.47□□□□□ -1.53
Clcn3-202ENSMUST00000056508 Snhg11Q4G0K9 87 aa5.46□□□□□ -1.54
Clcn3-202ENSMUST00000056508 4933428G20RikQ9D3X4 101 aa5.46□□□□□ -1.54
Clcn3-202ENSMUST00000056508 A930033H14RikG5E8X6 103 aa5.46□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Col6a3E9PWQ3 3284 aa5.45□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Plxnb3Q9QY40 1902 aa5.45□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Hivep3A2A884 2348 aa5.45□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Col24a1Q30D77 1733 aa5.45□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Jbts17Q8CE72 3214 aa5.44□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Gm10999F6Q4M4 69 aa5.44□□□□□ -1.54
Clcn3-202ENSMUST00000056508 A930009A15RikG3UYI6 118 aa5.44□□□□□ -1.54
Clcn3-202ENSMUST00000056508 AgrnA2ASQ1 1950 aa5.44□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Obsl1D3YYU8 1804 aaKnown RBP5.44□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Myo7bQ99MZ6 2113 aa5.43□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Defb42Q8BVB5 75 aa5.43□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Ltbp1Q8CG19 1712 aa5.43□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Gtf3c1Q8K284 2101 aa5.43□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Eml5Q8BQM8 1977 aa5.42□□□□□ -1.54
Clcn3-202ENSMUST00000056508 PkdrejQ9Z0T6 2126 aa5.42□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Atg2aQ6P4T0 1914 aa5.42□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Zfp407G3UVV3 2246 aa5.41□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Gm5464Q3UY29 175 aa5.41□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Wdfy3Q6VNB8 3508 aa5.4□□□□□ -1.54
Clcn3-202ENSMUST00000056508 1700018G05RikA0A1B0GSI2 66 aa5.4□□□□□ -1.54
Clcn3-202ENSMUST00000056508 TrioQ0KL02 3102 aa5.4□□□□□ -1.54
Clcn3-202ENSMUST00000056508 Plce1Q8K4S1 2282 aa5.4□□□□□ -1.55
Clcn3-202ENSMUST00000056508 DscamQ9ERC8 2013 aa5.4□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Gm40193A0A1B0GT39 78 aa5.39□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Brca2P97929 3329 aa5.38□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Ints1Q6P4S8 2195 aa5.38□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Defb50Q6TU36 73 aa5.38□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Cep350E9Q309 3095 aa5.38□□□□□ -1.55
Clcn3-202ENSMUST00000056508 TncQ80YX1 2110 aa5.38□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Lrrc37aB1AWG4 3215 aa5.37□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Lrp4Q8VI56 1905 aa5.37□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Ncoa6Q9JL19 2067 aa5.37□□□□□ -1.55
Clcn3-202ENSMUST00000056508 HttP42859 3119 aa5.37□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Rp1P56716 2095 aa5.36□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Znf575Q3TXZ1 239 aa5.36□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Gm10382Q3V0T5 144 aa5.36□□□□□ -1.55
Clcn3-202ENSMUST00000056508 1110002E22RikE0CYV9 1786 aa5.36□□□□□ -1.55
Clcn3-202ENSMUST00000056508 TprF6ZDS4 2431 aaKnown RBP5.35□□□□□ -1.55
Clcn3-202ENSMUST00000056508 Med12A2AGH6 2190 aa5.35□□□□□ -1.55
Clcn3-202ENSMUST00000056508 LctF8VPT3 1931 aa5.33□□□□□ -1.56
Clcn3-202ENSMUST00000056508 PtprbB2RU80 1998 aa5.33□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Tet2Q4JK59 1912 aaKnown RBP5.33□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Dido1Q8C9B9 2256 aaKnown RBP5.32□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Cdh23Q99PF4 3354 aa5.32□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Vps13aQ5H8C4 3166 aa5.32□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Adamts9E9PUN6 1931 aa5.32□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Szt2A2A9C3 3431 aa5.32□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Defb1P56386 69 aa5.31□□□□□ -1.56
Clcn3-202ENSMUST00000056508 PcntP48725 2898 aa5.31□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Gm11627A6PWP4 55 aa5.31□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Shank1D3YZU1 2167 aa5.31□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Cox6b2Q80ZN9 88 aa5.31□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Defb39Q70KL3 74 aa5.3□□□□□ -1.56
Clcn3-202ENSMUST00000056508 PtprsB0V2N1 1907 aa5.3□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Qrich2A0A140LIY9 2337 aa5.29□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Spta1P08032 2415 aa5.29□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Cacna1gQ5SUF7 2381 aa5.29□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Arhgap32Q811P8 2089 aa5.29□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Krtap29-1A2A5X4 342 aa5.28□□□□□ -1.56
Clcn3-202ENSMUST00000056508 Tln2Q71LX4 2375 aa5.27□□□□□ -1.57
Clcn3-202ENSMUST00000056508 Ncor1Q60974 2453 aa5.27□□□□□ -1.57
Clcn3-202ENSMUST00000056508 Gm10065F6TJM2 114 aa5.26□□□□□ -1.57
Clcn3-202ENSMUST00000056508 Abca1P41233 2261 aa5.26□□□□□ -1.57
Clcn3-202ENSMUST00000056508 Pcdh15Q99PJ1 1943 aa5.26□□□□□ -1.57
Clcn3-202ENSMUST00000056508 Tcf20Q9EPQ8 1987 aa5.26□□□□□ -1.57
Clcn3-202ENSMUST00000056508 Adamts20P59511 1906 aa5.25□□□□□ -1.57
Clcn3-202ENSMUST00000056508 Krtap3-1A2A591 98 aa5.25□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms