RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Wfdc3Q14AE4 130 aa16.16■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Kiaa1549Q68FD9 1940 aa16.16■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Igkv8-27A0A0G2JF28 120 aa16.15■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 TectaO08523 2155 aa16.15■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Col4a4Q9QZR9 1682 aa16.15■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 2310034G01RikA0A286YDL3 209 aa16.15■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Gm10308Q9CVR5 141 aa16.15■□□□□ 0.18
Sh3rf1-201ENSMUST00000034060 Elof1P60003 83 aa16.14■□□□□ 0.17
Sh3rf1-201ENSMUST00000034060 Nav2E9Q842 2432 aa16.14■□□□□ 0.17
Sh3rf1-201ENSMUST00000034060 MobpQ9D2P8 170 aa16.14■□□□□ 0.17
Sh3rf1-201ENSMUST00000034060 Col27a1Q5QNQ9 1845 aa16.13■□□□□ 0.17
Sh3rf1-201ENSMUST00000034060 Wfdc17Q5SSJ1 76 aa16.13■□□□□ 0.17
Sh3rf1-201ENSMUST00000034060 Sostdc1Q9CQN4 206 aa16.12■□□□□ 0.17
Sh3rf1-201ENSMUST00000034060 AI854703Q8BIN3 203 aa16.12■□□□□ 0.17
Sh3rf1-201ENSMUST00000034060 Psors1c2Q80ZC9 134 aa16.11■□□□□ 0.17
Sh3rf1-201ENSMUST00000034060 Prr13Q9CQJ5 137 aa16.11■□□□□ 0.17
Sh3rf1-201ENSMUST00000034060 Gm11627A6PWP4 55 aa16.08■□□□□ 0.17
Sh3rf1-201ENSMUST00000034060 Wnk1P83741 2377 aa16.08■□□□□ 0.16
Sh3rf1-201ENSMUST00000034060 A730009L09RikA0A1B0GS82 72 aa16.06■□□□□ 0.16
Sh3rf1-201ENSMUST00000034060 Dmac1Q9CQ00 111 aa16.06■□□□□ 0.16
Sh3rf1-201ENSMUST00000034060 Gm28374F6SG70 93 aa16.05■□□□□ 0.16
Sh3rf1-201ENSMUST00000034060 Defb2P82020 71 aa16.04■□□□□ 0.16
Sh3rf1-201ENSMUST00000034060 Gm21886J3QJU9 214 aa16.03■□□□□ 0.16
Sh3rf1-201ENSMUST00000034060 Gm26661M0QWV4 156 aa16.02■□□□□ 0.16
Sh3rf1-201ENSMUST00000034060 1700018G05RikA0A1B0GSI2 66 aa16.02■□□□□ 0.16
Sh3rf1-201ENSMUST00000034060 Gm12216A0A1W2P827 62 aa16.01■□□□□ 0.15
Sh3rf1-201ENSMUST00000034060 Defb37Q7TMD2 62 aa16.01■□□□□ 0.15
Sh3rf1-201ENSMUST00000034060 Ep300B2RWS6 2412 aa16.01■□□□□ 0.15
Sh3rf1-201ENSMUST00000034060 SonQ9QX47 2444 aaKnown RBP16.01■□□□□ 0.15
Sh3rf1-201ENSMUST00000034060 7530416G11RikJ3QJX6 159 aa16■□□□□ 0.15
Sh3rf1-201ENSMUST00000034060 Sorl1O88307 2215 aaKnown RBP15.99■□□□□ 0.15
Sh3rf1-201ENSMUST00000034060 Gm17606F6ZL36 78 aa15.99■□□□□ 0.15
Sh3rf1-201ENSMUST00000034060 Cdc42se1Q8BHL7 80 aa15.97■□□□□ 0.15
Sh3rf1-201ENSMUST00000034060 Krtap26-1Q9D7N2 215 aa15.97■□□□□ 0.15
Sh3rf1-201ENSMUST00000034060 Srsf12Q8C8K3 266 aa15.97■□□□□ 0.15
Sh3rf1-201ENSMUST00000034060 1600014C23RikQ9DAX4 101 aa15.95■□□□□ 0.14
Sh3rf1-201ENSMUST00000034060 Col5a1O88207 1838 aa15.93■□□□□ 0.14
Sh3rf1-201ENSMUST00000034060 Gm44790A0A0N4SV91 103 aa15.93■□□□□ 0.14
Sh3rf1-201ENSMUST00000034060 E130208F15RikQ3UPV3 143 aa15.9■□□□□ 0.14
Sh3rf1-201ENSMUST00000034060 Gm20661K7N787 53 aa15.9■□□□□ 0.14
Sh3rf1-201ENSMUST00000034060 Gm10770F7D043 238 aa15.88■□□□□ 0.13
Sh3rf1-201ENSMUST00000034060 Gm10643Q3URG9 111 aa15.87■□□□□ 0.13
Sh3rf1-201ENSMUST00000034060 AI606181Q8C7B9 129 aa15.87■□□□□ 0.13
Sh3rf1-201ENSMUST00000034060 Gm16181B0V2H2 73 aa15.87■□□□□ 0.13
Sh3rf1-201ENSMUST00000034060 Defb39Q70KL3 74 aa15.85■□□□□ 0.13
Sh3rf1-201ENSMUST00000034060 Coa5Q99M07 74 aa15.85■□□□□ 0.13
Sh3rf1-201ENSMUST00000034060 Prol1E9PYQ4 312 aa15.83■□□□□ 0.12
Sh3rf1-201ENSMUST00000034060 A930002H24RikQ8C8Y3 163 aa15.81■□□□□ 0.12
Sh3rf1-201ENSMUST00000034060 Gm10837Q3UTT8 145 aa15.8■□□□□ 0.12
Sh3rf1-201ENSMUST00000034060 4930507D05RikQ8C9C9 103 aa15.8■□□□□ 0.12
Sh3rf1-201ENSMUST00000034060 Ly6g6cQ9Z1Q4 126 aa15.79■□□□□ 0.12
Sh3rf1-201ENSMUST00000034060 Brwd1Q921C3 2304 aa15.79■□□□□ 0.12
Sh3rf1-201ENSMUST00000034060 Gm10999F6Q4M4 69 aa15.78■□□□□ 0.12
Sh3rf1-201ENSMUST00000034060 Gm17689B3GLJ4 109 aa15.75■□□□□ 0.11
Sh3rf1-201ENSMUST00000034060 Phxr4P15974 95 aa15.75■□□□□ 0.11
Sh3rf1-201ENSMUST00000034060 Dido1Q8C9B9 2256 aaKnown RBP15.75■□□□□ 0.11
Sh3rf1-201ENSMUST00000034060 Gm10772F7AIG4 85 aa15.75■□□□□ 0.11
Sh3rf1-201ENSMUST00000034060 Gm10642Q3TWM1 71 aa15.74■□□□□ 0.11
Sh3rf1-201ENSMUST00000034060 Defb10Q8R2I8 73 aa15.73■□□□□ 0.11
Sh3rf1-201ENSMUST00000034060 Col4a2P08122 1707 aa15.73■□□□□ 0.11
Sh3rf1-201ENSMUST00000034060 Defb50Q6TU36 73 aa15.73■□□□□ 0.11
Sh3rf1-201ENSMUST00000034060 Flg2Q2VIS4 2362 aa15.71■□□□□ 0.11
Sh3rf1-201ENSMUST00000034060 Snhg11Q4G0K9 87 aa15.68■□□□□ 0.1
Sh3rf1-201ENSMUST00000034060 Mp68P56379 58 aa15.66■□□□□ 0.1
Sh3rf1-201ENSMUST00000034060 Uqcr11Q9CPX8 56 aa15.64■□□□□ 0.09
Sh3rf1-201ENSMUST00000034060 Znf414Q9DCK4 299 aa15.63■□□□□ 0.09
Sh3rf1-201ENSMUST00000034060 Gm27235Q3UW50 83 aa15.61■□□□□ 0.09
Sh3rf1-201ENSMUST00000034060 Myo9aQ8C170 2542 aa15.61■□□□□ 0.09
Sh3rf1-201ENSMUST00000034060 Rpl37aP61514 92 aa15.61■□□□□ 0.09
Sh3rf1-201ENSMUST00000034060 Q8BT88 171 aa15.6■□□□□ 0.09
Sh3rf1-201ENSMUST00000034060 Spg11Q3UHA3 2430 aa15.57■□□□□ 0.08
Sh3rf1-201ENSMUST00000034060 Hcfc1Q61191 2045 aaKnown RBP15.56■□□□□ 0.08
Sh3rf1-201ENSMUST00000034060 1810062G17RikG3X8Y2 129 aa15.56■□□□□ 0.08
Sh3rf1-201ENSMUST00000034060 Phf5aP83870 110 aaKnown RBP15.56■□□□□ 0.08
Sh3rf1-201ENSMUST00000034060 AplnQ9R0R4 77 aa15.54■□□□□ 0.08
Sh3rf1-201ENSMUST00000034060 Eif4ebp3Q80VV3 101 aa15.54■□□□□ 0.08
Sh3rf1-201ENSMUST00000034060 Sprr1bQ62267 153 aa15.53■□□□□ 0.08
Sh3rf1-201ENSMUST00000034060 AY074887Q8R5F9 132 aa15.5■□□□□ 0.07
Sh3rf1-201ENSMUST00000034060 Gm7276Q3TYW4 209 aa15.5■□□□□ 0.07
Sh3rf1-201ENSMUST00000034060 Q8BGJ3 129 aa15.5■□□□□ 0.07
Sh3rf1-201ENSMUST00000034060 C2cd3Q52KB6 2323 aa15.49■□□□□ 0.07
Sh3rf1-201ENSMUST00000034060 Gm5617Q91VN2 117 aa15.47■□□□□ 0.07
Sh3rf1-201ENSMUST00000034060 NbasE9Q411 2356 aa15.46■□□□□ 0.07
Sh3rf1-201ENSMUST00000034060 Ankhd1E9PUR0 2548 aaKnown RBP15.44■□□□□ 0.06
Sh3rf1-201ENSMUST00000034060 Gpr15lA0A0B4J1N3 78 aa15.44■□□□□ 0.06
Sh3rf1-201ENSMUST00000034060 Sprr4Q8CGN8 76 aa15.44■□□□□ 0.06
Sh3rf1-201ENSMUST00000034060 Krtap24-1G3X9A2 248 aa15.41■□□□□ 0.06
Sh3rf1-201ENSMUST00000034060 BC067074F6RXI4 2391 aa15.41■□□□□ 0.06
Sh3rf1-201ENSMUST00000034060 Krtap11-1E9Q2E9 183 aa15.37■□□□□ 0.05
Sh3rf1-201ENSMUST00000034060 OtoglF7A4A7 2325 aa15.37■□□□□ 0.05
Sh3rf1-201ENSMUST00000034060 Alms1Q8K4E0 3251 aa15.36■□□□□ 0.05
Sh3rf1-201ENSMUST00000034060 Defb1P56386 69 aa15.35■□□□□ 0.05
Sh3rf1-201ENSMUST00000034060 Spaca4Q80ZQ0 127 aa15.35■□□□□ 0.05
Sh3rf1-201ENSMUST00000034060 Gm3285A0A1W2P7U0 201 aa15.34■□□□□ 0.05
Sh3rf1-201ENSMUST00000034060 AcacbE9Q4Z2 2448 aa15.33■□□□□ 0.05
Sh3rf1-201ENSMUST00000034060 Fam168bQ80XQ8 194 aa15.33■□□□□ 0.04
Sh3rf1-201ENSMUST00000034060 A330070K13RikQ8CA53 115 aa15.31■□□□□ 0.04
Sh3rf1-201ENSMUST00000034060 Gm11213A0A1B0GR83 88 aa15.3■□□□□ 0.04
Sh3rf1-201ENSMUST00000034060 Abca2P41234 2434 aa15.28■□□□□ 0.04
Sh3rf1-201ENSMUST00000034060 AW011738F6S7Q2 159 aa15.27■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 123.7 ms