RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 PemtQ61907 199 aa13.97□□□□□ -0.17
Ctdsp1-201ENSMUST00000027367 Trav13-4-dv7A0A075B6C2 110 aa13.97□□□□□ -0.17
Ctdsp1-201ENSMUST00000027367 SelenowP63300 88 aa13.96□□□□□ -0.17
Ctdsp1-201ENSMUST00000027367 Vmo1Q5SXG7 201 aa13.96□□□□□ -0.17
Ctdsp1-201ENSMUST00000027367 Vpreb1P13372 142 aa13.96□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 PrcdQ00LT2 53 aa13.95□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Dad1P61804 113 aa13.95□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Tm2d2Q8R0I4 213 aa13.95□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Sostdc1Q9CQN4 206 aa13.94□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Higd2aQ9CQJ1 106 aa13.93□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Srrm2Q8BTI8 2703 aaKnown RBP13.93□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 4930524J08RikQ9CUJ5 163 aa13.93□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Igkv6-13A0A0G2JGY3 119 aa13.92□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Acyp1P56376 99 aa13.92□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Lst1O08843 95 aa13.92□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Klk9Q32M27 251 aa13.91□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 H2al1bA0A087WP11 105 aa13.91□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Ube2d4D3YUH6 135 aa13.91□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 H2al1kJ3QP08 105 aa13.91□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 H2al1eQ810S6 105 aa13.91□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 H2al1mQ9DAD9 105 aa13.91□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Odf3l2Q3TZ65 277 aa13.9□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Gm7138L7N2C3 230 aa13.9□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Cops9Q3U898 57 aa13.9□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Gm3238W4VSP7 230 aa13.9□□□□□ -0.18
Ctdsp1-201ENSMUST00000027367 Gm37389A0A0A6YW05 95 aa13.89□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Tmem223Q9CQE2 199 aaKnown RBP13.89□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Trav13d-4A0A0G2JFX3 110 aa13.89□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Trbv13-2A0A140T8N6 113 aa13.88□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Tmem254aP0DN89 123 aa13.88□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Tmem254bP0DN90 123 aa13.88□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Tmem254cP0DN91 123 aa13.88□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Smim26Q3V460 107 aa13.88□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Rpl28P41105 137 aaKnown RBP13.88□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 ApcQ61315 2845 aa13.87□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Igkv1-99F6XWB2 120 aa13.87□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Zfand2aQ9JII7 171 aa13.85□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 E130114P18RikF6S0S7 154 aa13.85□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Gm10577Q3UDV9 132 aa13.85□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Trav9d-4A0A0G2JG37 103 aa13.84□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Gm10549Q3URY4 149 aa13.84□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Serp1Q9Z1W5 66 aa13.84□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Col6a5A6H584 2640 aa13.83□□□□□ -0.19
Ctdsp1-201ENSMUST00000027367 Igkv1-35A0A0G2JDE5 120 aa13.83□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 1700011M02RikB1AX35 88 aa13.83□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Dph3Q8K0W9 82 aa13.83□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Prh1P05142 261 aa13.82□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Psors1c2Q80ZC9 134 aa13.82□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Defb50Q6TU36 73 aa13.81□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 B230307C23RikQ8BLB2 64 aa13.81□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Lage3Q9CR70 148 aa13.81□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 SnurfQ9WU12 71 aa13.8□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Gm36176A0A1W2P8D5 158 aa13.8□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Phxr5P08399 672 aa13.79□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Defa20Q45VN2 95 aa13.79□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Bles03Q8VD62 251 aa13.79□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 P01755 137 aa13.78□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Notch1Q01705 2531 aa13.78□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Kmt2aP55200 3966 aa13.78□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 PtprqP0C5E4 2300 aa13.77□□□□□ -0.2
Ctdsp1-201ENSMUST00000027367 Igkv3-9A0A140T8P4 119 aa13.77□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Gm11213A0A1B0GR83 88 aa13.76□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Sprr1bQ62267 153 aa13.76□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Bean1Q9EQG5 255 aa13.76□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Gm16381A0A1Y7VKT9 73 aa13.75□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 CnbpP53996 178 aaKnown RBP13.75□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 1810062G17RikG3X8Y2 129 aa13.75□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Defb29Q8BGW9 78 aa13.75□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 B230359F08RikA0A0B4J1K3 109 aa13.74□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Wfdc17Q5SSJ1 76 aa13.74□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Fam19a1Q7TPG8 133 aa13.74□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Ifitm6A0A1B0GS75 124 aa13.73□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Pfn2Q9JJV2 140 aa13.73□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Pou2af1Q64693 256 aa13.72□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Ighv8-13A0A075B5Y0 101 aa13.71□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Igkv1-117A0A140T8M0 119 aa13.71□□□□□ -0.21
Ctdsp1-201ENSMUST00000027367 Trav9n-4A0A075B631 113 aa13.71□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Gm10647E9Q8X0 124 aa13.71□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 EnhoQ8K1D8 76 aa13.71□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Ndufa12Q7TMF3 145 aaKnown RBP13.7□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Ighv1-56A0A0A6YXG2 117 aa13.7□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Gm7137J3QMW1 236 aa13.69□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Sec61gP60060 68 aa13.69□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 4930556J24RikQ9D4U7 146 aa13.69□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Fam229bQ8CF36 80 aa13.68□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 BikO70337 150 aa13.68□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Lamtor3O88653 124 aa13.68□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 E130208F15RikQ3UPV3 143 aa13.68□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 4930535I16RikQ9CUI2 172 aa13.67□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 VwfQ8CIZ8 2813 aa13.67□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 A530084C06RikQ3UTW2 186 aa13.67□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Gm10308Q9CVR5 141 aa13.67□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Krtap11-1E9Q2E9 183 aa13.65□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Gm28374F6SG70 93 aa13.65□□□□□ -0.22
Ctdsp1-201ENSMUST00000027367 Ighv2-9-1A0A075B697 116 aa13.64□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Defa27F2Z403 93 aa13.64□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Pet100P0DJE0 76 aa13.64□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Igkv8-21A0A140T8P7 120 aa13.63□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Dnah10D3YYQ8 4591 aa13.63□□□□□ -0.23
Ctdsp1-201ENSMUST00000027367 Q9DAA7 145 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms