RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Chchd7Q8K2Q5 85 aa11.88□□□□□ -0.51
Col17a1-201ENSMUST00000026045 A930009A15RikG3UYI6 118 aa11.87□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Col4a2P08122 1707 aa11.87□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Defb2P82020 71 aa11.87□□□□□ -0.51
Col17a1-201ENSMUST00000026045 AI606181Q8C7B9 129 aa11.87□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Q9DAA7 145 aa11.86□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Q9DAB9 146 aa11.86□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Usp9xP70398 2559 aaKnown RBP11.86□□□□□ -0.51
Col17a1-201ENSMUST00000026045 C2cd3Q52KB6 2323 aa11.85□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Ighv2-2A0A075B5P8 116 aa11.85□□□□□ -0.51
Col17a1-201ENSMUST00000026045 P01821 116 aa11.85□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Defb42Q8BVB5 75 aa11.85□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Wfdc13Q5DQQ6 81 aa11.85□□□□□ -0.51
Col17a1-201ENSMUST00000026045 TrioQ0KL02 3102 aa11.85□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Gm26661M0QWV4 156 aa11.85□□□□□ -0.51
Col17a1-201ENSMUST00000026045 Ighv2-9-1A0A075B697 116 aa11.83□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Zfand2aQ9JII7 171 aa11.83□□□□□ -0.52
Col17a1-201ENSMUST00000026045 CenpfE9Q3P4 2997 aaKnown RBP11.82□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Gm10308Q9CVR5 141 aa11.82□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Igkv8-27A0A0G2JF28 120 aa11.82□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Igkv8-30A0A140T8M3 121 aa11.82□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Igkv8-21A0A140T8P7 120 aa11.81□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Gm9922Q8C3P1 144 aa11.81□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Hivep3A2A884 2348 aa11.81□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Ttc28Q80XJ3 2450 aa11.81□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Gm9887F6RFI0 207 aa11.81□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Gm10643Q3URG9 111 aa11.81□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Gpha2Q925Q5 128 aa11.81□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Gm3443F7CCV5 94 aa11.8□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Gm9767G3X930 207 aa11.8□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Gm10160F6Y577 67 aa11.8□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Igkv3-12A0A140T8P0 119 aa11.78□□□□□ -0.52
Col17a1-201ENSMUST00000026045 Limd2Q8BGB5 128 aa11.77□□□□□ -0.53
Col17a1-201ENSMUST00000026045 Mrpl34Q99N91 92 aa11.75□□□□□ -0.53
Col17a1-201ENSMUST00000026045 Pla2g1bQ9Z0Y2 146 aa11.74□□□□□ -0.53
Col17a1-201ENSMUST00000026045 Reg3aO09037 175 aa11.74□□□□□ -0.53
Col17a1-201ENSMUST00000026045 C130032M10RikQ8C888 123 aa11.73□□□□□ -0.53
Col17a1-201ENSMUST00000026045 Coa5Q99M07 74 aa11.72□□□□□ -0.53
Col17a1-201ENSMUST00000026045 Lama3Q61789 3330 aa11.72□□□□□ -0.53
Col17a1-201ENSMUST00000026045 Gm17689B3GLJ4 109 aa11.7□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Gm4707V9GXN5 68 aa11.69□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Cox6a2P43023 97 aa11.68□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Defb37Q7TMD2 62 aa11.68□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Phxr4P15974 95 aa11.68□□□□□ -0.54
Col17a1-201ENSMUST00000026045 FshbQ60687 130 aa11.68□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Q8K1L6 76 aa11.68□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Gm9903Q8C9Y8 129 aa11.67□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Bahcc1Q3UHR0 2643 aa11.67□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Msrb1Q9JLC3 116 aa11.67□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Gm20661K7N787 53 aa11.66□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Gm17509Q9CZ61 145 aa11.66□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Ighv2-9A0A075B5Q5 116 aa11.65□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Znf414Q9DCK4 299 aa11.65□□□□□ -0.54
Col17a1-201ENSMUST00000026045 Gm28230A0A0A0MQ91 144 aa11.64□□□□□ -0.55
Col17a1-201ENSMUST00000026045 D730001G18RikA0A087WQU7 115 aa11.63□□□□□ -0.55
Col17a1-201ENSMUST00000026045 TrrapQ80YV3 2565 aaKnown RBP11.63□□□□□ -0.55
Col17a1-201ENSMUST00000026045 Ccdc179J3QM76 67 aa11.63□□□□□ -0.55
Col17a1-201ENSMUST00000026045 Eif4ebp3Q80VV3 101 aa11.61□□□□□ -0.55
Col17a1-201ENSMUST00000026045 Wfdc15aQ8BH89 80 aa11.61□□□□□ -0.55
Col17a1-201ENSMUST00000026045 Gm5617Q91VN2 117 aa11.6□□□□□ -0.55
Col17a1-201ENSMUST00000026045 SycnQ8VCK7 134 aa11.6□□□□□ -0.55
Col17a1-201ENSMUST00000026045 Gm21886J3QJU9 214 aa11.59□□□□□ -0.55
Col17a1-201ENSMUST00000026045 Igkv3-7A0A0G2JE31 119 aa11.58□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Bri3P28662 125 aa11.58□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Gm44790A0A0N4SV91 103 aa11.57□□□□□ -0.56
Col17a1-201ENSMUST00000026045 U90926O08546 118 aa11.57□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Igkv8-19A0A0G2JFN8 121 aa11.57□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Notch2O35516 2470 aa11.56□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Znf706Q9D115 76 aaKnown RBP11.56□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Lama2Q60675 3118 aaKnown RBP11.56□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Zfp292Q9Z2U2 2698 aa11.56□□□□□ -0.56
Col17a1-201ENSMUST00000026045 A730009L09RikA0A1B0GS82 72 aa11.55□□□□□ -0.56
Col17a1-201ENSMUST00000026045 MtorQ9JLN9 2549 aa11.55□□□□□ -0.56
Col17a1-201ENSMUST00000026045 PscaP57096 123 aa11.55□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Srsf12Q8C8K3 266 aa11.54□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Hivep2Q3UHF7 2430 aa11.54□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Wfdc6bF6ULY1 148 aa11.53□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Setd2E9Q5F9 2537 aa11.53□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Gm12216A0A1W2P827 62 aa11.53□□□□□ -0.56
Col17a1-201ENSMUST00000026045 Gm10770F7D043 238 aa11.52□□□□□ -0.56
Col17a1-201ENSMUST00000026045 CrygaP04345 174 aa11.52□□□□□ -0.56
Col17a1-201ENSMUST00000026045 1700018G05RikA0A1B0GSI2 66 aa11.52□□□□□ -0.56
Col17a1-201ENSMUST00000026045 PtprqP0C5E4 2300 aa11.52□□□□□ -0.57
Col17a1-201ENSMUST00000026045 Usp34Q6ZQ93 3582 aa11.52□□□□□ -0.57
Col17a1-201ENSMUST00000026045 Elof1P60003 83 aa11.5□□□□□ -0.57
Col17a1-201ENSMUST00000026045 Abca12E9Q876 2595 aa11.5□□□□□ -0.57
Col17a1-201ENSMUST00000026045 CnbpP53996 178 aaKnown RBP11.49□□□□□ -0.57
Col17a1-201ENSMUST00000026045 Wfdc3Q14AE4 130 aa11.49□□□□□ -0.57
Col17a1-201ENSMUST00000026045 Zfp462B1AWL2 2495 aaKnown RBP11.49□□□□□ -0.57
Col17a1-201ENSMUST00000026045 MobpQ9D2P8 170 aa11.48□□□□□ -0.57
Col17a1-201ENSMUST00000026045 1810062G17RikG3X8Y2 129 aa11.48□□□□□ -0.57
Col17a1-201ENSMUST00000026045 Prune2Q52KR3 3084 aa11.47□□□□□ -0.57
Col17a1-201ENSMUST00000026045 Chchd10Q7TNL9 138 aa11.47□□□□□ -0.57
Col17a1-201ENSMUST00000026045 Wfdc17Q5SSJ1 76 aa11.45□□□□□ -0.58
Col17a1-201ENSMUST00000026045 Nupr2Q497P3 102 aa11.45□□□□□ -0.58
Col17a1-201ENSMUST00000026045 Mki67E9PVX6 3177 aaKnown RBP11.44□□□□□ -0.58
Col17a1-201ENSMUST00000026045 Fam229bQ8CF36 80 aa11.43□□□□□ -0.58
Col17a1-201ENSMUST00000026045 Ighv8-13A0A075B5Y0 101 aa11.43□□□□□ -0.58
Col17a1-201ENSMUST00000026045 Mp68P56379 58 aa11.42□□□□□ -0.58
Col17a1-201ENSMUST00000026045 Jbts17Q8CE72 3214 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms