RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Kif26aQ52KG5 1881 aa5.53□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 PtprqP0C5E4 2300 aa5.53□□□□□ -1.52
Pcdh9-204ENSMUST00000193901 PrlhG3UWC3 86 aa5.52□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Gm20708H3BKF4 155 aa5.52□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Rp1P56716 2095 aa5.52□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Lmo4P61969 165 aa5.52□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 AI606181Q8C7B9 129 aa5.52□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 CadB2RQC6 2225 aa5.52□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Krtap16-1A2A5X5 502 aa5.52□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Spink13Q3UTS8 97 aa5.52□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Gm10490F6VBM2 120 aa5.51□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Adamts9E9PUN6 1931 aa5.51□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 2310034G01RikA0A286YDL3 209 aa5.51□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Usf3B2RUQ2 2221 aa5.51□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Elof1P60003 83 aa5.51□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 PkdrejQ9Z0T6 2126 aa5.5□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Msrb1Q9JLC3 116 aa5.5□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Prrc2aQ7TSC1 2158 aaKnown RBP5.5□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Cyyr1Q8VIH7 165 aa5.5□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Uqcr11Q9CPX8 56 aa5.5□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Dock4P59764 1978 aa5.5□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Frem1Q684R7 2191 aa5.5□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Trip12G5E870 2025 aaKnown RBP5.5□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Krtap27-1E9PX37 202 aa5.5□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Gm26661M0QWV4 156 aa5.5□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 CstadQ9D245 104 aa5.49□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Gvin1Q80SU7 2427 aa5.49□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Pcnx1Q9QYC1 2344 aa5.49□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Ank3G5E8K5 1961 aa5.49□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Dido1Q8C9B9 2256 aaKnown RBP5.48□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Gm10837Q3UTT8 145 aa5.48□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Gm17689B3GLJ4 109 aa5.48□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Gm5617Q91VN2 117 aa5.48□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Atg2bQ80XK6 2075 aa5.48□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Zfp236S4R299 1847 aa5.47□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Gm21886J3QJU9 214 aa5.47□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Col4a6B1AVK5 1691 aa5.47□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 7530416G11RikJ3QJX6 159 aa5.47□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Arid2E9Q7E2 1828 aa5.47□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Exph5Q0VAV2 1960 aa5.46□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Dscaml1Q4VA61 2053 aa5.46□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Eml6Q5SQM0 1958 aa5.46□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Dennd4aE9Q8V6 1869 aa5.46□□□□□ -1.53
Pcdh9-204ENSMUST00000193901 Gm10135F6TEE5 83 aa5.46□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Gm45861A0A1B0GRY3 1923 aa5.46□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Gm16223Q8CBM3 117 aa5.45□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Gm9903Q8C9Y8 129 aa5.45□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 1700056E22RikF7CNM6 234 aa5.45□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Odf3l2Q3TZ65 277 aa5.45□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Wdr81Q5ND34 1934 aa5.44□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 D730001G18RikA0A087WQU7 115 aa5.44□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Gm11627A6PWP4 55 aa5.44□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Ncor1Q60974 2453 aa5.44□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 MyofQ69ZN7 2048 aaKnown RBP5.44□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Cfap46E9Q2C0 2641 aa5.44□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Phxr4P15974 95 aa5.44□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 ThadaA8C756 1938 aa5.43□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Arhgef17Q80U35 2057 aa5.43□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 1700018G05RikA0A1B0GSI2 66 aa5.43□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 E130116L18RikQ8BMV6 101 aa5.43□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Pla2g2eQ9QUL3 142 aa5.42□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Plxna3P70208 1872 aa5.42□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 MpdzQ8VBX6 2055 aa5.42□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Gm10770F7D043 238 aa5.42□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Cd164l2Q9D6W7 172 aa5.42□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Cdip1Q9DB75 208 aa5.42□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Sec16aA2AIX1 2377 aa5.41□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Cnot1Q6ZQ08 2375 aaKnown RBP5.41□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 TncQ80YX1 2110 aa5.41□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Nup210lQ9D2F7 1881 aa5.41□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 F5O88783 2183 aa5.41□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Gpr15lA0A0B4J1N3 78 aa5.41□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 C2cd3Q52KB6 2323 aa5.41□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 PtprdQ64487 1912 aa5.4□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Dmac1Q9CQ00 111 aa5.4□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Ncoa6Q9JL19 2067 aa5.4□□□□□ -1.54
Pcdh9-204ENSMUST00000193901 Gm10642Q3TWM1 71 aa5.4□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Coa5Q99M07 74 aa5.4□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Gm27235Q3UW50 83 aa5.4□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Sdk1Q3UH53 2193 aa5.4□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Gm9925F6T2U3 160 aa5.39□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Nav3Q80TN7 2359 aa5.39□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Atg2aQ6P4T0 1914 aa5.38□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Phxr5P08399 672 aa5.38□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Defb10Q8R2I8 73 aa5.38□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Greb1Q3UHK3 1954 aa5.38□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 MylkQ6PDN3 1941 aaKnown RBP5.38□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Plxnb1Q8CJH3 2119 aa5.38□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Gm9767G3X930 207 aa5.37□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 AvpP35455 168 aa5.37□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Defb1P56386 69 aa5.37□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Gm44790A0A0N4SV91 103 aa5.37□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Plxnb3Q9QY40 1902 aa5.36□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 MobpQ9D2P8 170 aa5.36□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Col24a1Q30D77 1733 aa5.36□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 FancmQ8BGE5 2021 aa5.36□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Nckap5E9QAE1 1909 aa5.36□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 B430305J03RikQ8BQQ8 176 aa5.35□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 Crip3Q6Q6R3 243 aa5.35□□□□□ -1.55
Pcdh9-204ENSMUST00000193901 NrgnP60761 78 aa5.35□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms