RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gm26602M0QWA4 95 aa17.61■□□□□ 0.41
Tpm1-216ENSMUST00000113707 Ccl25O35903 144 aa17.6■□□□□ 0.41
Tpm1-216ENSMUST00000113707 Ighv2-9-1A0A075B697 116 aa17.58■□□□□ 0.41
Tpm1-216ENSMUST00000113707 CckP09240 115 aa17.58■□□□□ 0.41
Tpm1-216ENSMUST00000113707 Glrp1E9Q9S8 174 aa17.56■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Snhg11Q4G0K9 87 aa17.56■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Defb50Q6TU36 73 aa17.56■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Gm4861Q8C5A4 106 aa17.56■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Trav9n-4A0A075B631 113 aa17.55■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Gm3618D3Z4P5 127 aa17.55■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Gm2916Q9D9B9 127 aa17.55■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Mtatp8P03930 67 aa17.54■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Cops9Q3U898 57 aa17.54■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Rab37Q9JKM7 223 aa17.54■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Prh1P05142 261 aa17.54■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Sslp1Q3UN54 99 aa17.54■□□□□ 0.4
Tpm1-216ENSMUST00000113707 PemtQ61907 199 aa17.54■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Igkv3-1A0A075B5P1 119 aa17.53■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Slamf6Q9ET39 351 aa17.52■□□□□ 0.4
Tpm1-216ENSMUST00000113707 AplnQ9R0R4 77 aa17.52■□□□□ 0.4
Tpm1-216ENSMUST00000113707 Dnah6E9Q0B6 4144 aa17.52■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Notch1Q01705 2531 aa17.51■□□□□ 0.39
Tpm1-216ENSMUST00000113707 4930415O20RikQ8CDT5 131 aa17.51■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Trav9d-4A0A0G2JG37 103 aa17.5■□□□□ 0.39
Tpm1-216ENSMUST00000113707 E130208F15RikQ3UPV3 143 aa17.5■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Spink13Q3UTS8 97 aa17.5■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Trav13-1A0A075B644 110 aa17.49■□□□□ 0.39
Tpm1-216ENSMUST00000113707 1700011M02RikB1AX35 88 aa17.49■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Gm10577Q3UDV9 132 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 B9d2Q3UK10 175 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 4930544G11RikQ9CR99 193 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Igsf10Q3V1M1 2594 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Gm11020F6ZGD5 61 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 P01755 137 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Defa3P28310 93 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Defa10P50708 93 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Defa15P50713 93 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 EnhoQ8K1D8 76 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Sostdc1Q9CQN4 206 aa17.48■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Dnah3Q8BW94 4083 aa17.47■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Prss58Q8BW11 241 aa17.47■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Krtap11-1E9Q2E9 183 aa17.46■□□□□ 0.39
Tpm1-216ENSMUST00000113707 SpinklQ8CEK3 90 aa17.46■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Bles03Q8VD62 251 aa17.46■□□□□ 0.39
Tpm1-216ENSMUST00000113707 Rpl13aP19253 203 aaKnown RBP17.46■□□□□ 0.38
Tpm1-216ENSMUST00000113707 Rpl32-psP17932 135 aa17.45■□□□□ 0.38
Tpm1-216ENSMUST00000113707 Mzt1Q8BUR9 78 aa17.45■□□□□ 0.38
Tpm1-216ENSMUST00000113707 Dnah14A0A140LIJ4 4489 aa17.44■□□□□ 0.38
Tpm1-216ENSMUST00000113707 Reg3bP35230 175 aa17.44■□□□□ 0.38
Tpm1-216ENSMUST00000113707 Dnah10D3YYQ8 4591 aa17.44■□□□□ 0.38
Tpm1-216ENSMUST00000113707 Tmem86bQ497J1 226 aa17.43■□□□□ 0.38
Tpm1-216ENSMUST00000113707 TnxbO35452 4006 aa17.42■□□□□ 0.38
Tpm1-216ENSMUST00000113707 Cks1bP61025 79 aa17.41■□□□□ 0.38
Tpm1-216ENSMUST00000113707 Zc2hc1bQ9D534 172 aa17.41■□□□□ 0.38
Tpm1-216ENSMUST00000113707 2010109I03RikQ9CQ11 111 aa17.4■□□□□ 0.38
Tpm1-216ENSMUST00000113707 VwfQ8CIZ8 2813 aa17.4■□□□□ 0.38
Tpm1-216ENSMUST00000113707 Gm11213A0A1B0GR83 88 aa17.39■□□□□ 0.38
Tpm1-216ENSMUST00000113707 NrepQ07475 68 aa17.39■□□□□ 0.38
Tpm1-216ENSMUST00000113707 Gm4707V9GXN5 68 aa17.39■□□□□ 0.38
Tpm1-216ENSMUST00000113707 B230359F08RikA0A0B4J1K3 109 aa17.39■□□□□ 0.37
Tpm1-216ENSMUST00000113707 Cox11Q6P8I6 275 aa17.39■□□□□ 0.37
Tpm1-216ENSMUST00000113707 Gm26920S4R2A5 56 aa17.38■□□□□ 0.37
Tpm1-216ENSMUST00000113707 Gm10647E9Q8X0 124 aa17.37■□□□□ 0.37
Tpm1-216ENSMUST00000113707 AW011738F6S7Q2 159 aa17.37■□□□□ 0.37
Tpm1-216ENSMUST00000113707 Lst1O08843 95 aa17.37■□□□□ 0.37
Tpm1-216ENSMUST00000113707 Lage3Q9CR70 148 aa17.37■□□□□ 0.37
Tpm1-216ENSMUST00000113707 P01896 185 aa17.35■□□□□ 0.37
Tpm1-216ENSMUST00000113707 Ighv1-56A0A0A6YXG2 117 aa17.35■□□□□ 0.37
Tpm1-216ENSMUST00000113707 Hint1P70349 126 aaKnown RBP17.35■□□□□ 0.37
Tpm1-216ENSMUST00000113707 Defa2P28309 93 aa17.34■□□□□ 0.37
Tpm1-216ENSMUST00000113707 Pfn2Q9JJV2 140 aa17.33■□□□□ 0.37
Tpm1-216ENSMUST00000113707 Ighv13-2A0A0A6YWN3 119 aa17.33■□□□□ 0.36
Tpm1-216ENSMUST00000113707 MalO09198 153 aa17.32■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Defb47Q30KN1 79 aa17.32■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Ly6hQ9WUC3 139 aa17.31■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Gm867A0A1W2P7T4 151 aa17.31■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Vps25Q9CQ80 176 aa17.31■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Igkv8-24A0A140T8P5 121 aa17.29■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Gm12057A0A087WR21 115 aa17.29■□□□□ 0.36
Tpm1-216ENSMUST00000113707 C530025M09RikF6RGA8 229 aa17.29■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Eif4ebp3Q80VV3 101 aa17.29■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Gm10549Q3URY4 149 aa17.28■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Dnah17Q69Z23 4481 aa17.27■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Tcl1b5P56845 121 aa17.27■□□□□ 0.36
Tpm1-216ENSMUST00000113707 Wdr38Q9D994 303 aa17.27■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Pxt1Q8K459 51 aa17.26■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Gm5617Q91VN2 117 aa17.24■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Dppa2Q9CWH0 301 aa17.24■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Phpt1Q9DAK9 124 aa17.24■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Ighv2-9A0A075B5Q5 116 aa17.24■□□□□ 0.35
Tpm1-216ENSMUST00000113707 SelenowP63300 88 aa17.24■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Gm17349F7BGH6 99 aa17.23■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Tcl1b3P56842 122 aa17.22■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Gm29423A0A087WRM1 55 aa17.22■□□□□ 0.35
Tpm1-216ENSMUST00000113707 CenpwQ3URR0 86 aa17.22■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Cited1P97769 203 aa17.21■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Ndufa12Q7TMF3 145 aaKnown RBP17.21■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Q9DAQ5 155 aa17.21■□□□□ 0.35
Tpm1-216ENSMUST00000113707 Gm9903Q8C9Y8 129 aa17.2■□□□□ 0.34
Tpm1-216ENSMUST00000113707 Try10Q792Z1 246 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 362.3 ms