RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Plac8l1Q08EJ0 177 aa5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Tmem223Q9CQE2 199 aaKnown RBP5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Crip2Q9DCT8 208 aaKnown RBP5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Trav13n-2A0A0G2JF93 110 aa5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 P01755 137 aa5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Cdk2ap2Q9CPY4 127 aa5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Igkv1-35A0A0G2JDE5 120 aa5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 E130218I03RikA0A0U1RNU5 63 aa5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 1700011M02RikB1AX35 88 aa5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Defa4P28311 92 aa5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Trav9n-4A0A075B631 113 aa5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Igkv4-72A0A0B4J1I4 117 aa5.93□□□□□ -1.46
Bdnf-202ENSMUST00000111042 2310009B15RikA0A0A6YWI4 143 aa5.92□□□□□ -1.46
Bdnf-202ENSMUST00000111042 NpwA0A1L1STR8 176 aa5.92□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Smim26Q3V460 107 aa5.92□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Smr3aQ61900 147 aa5.92□□□□□ -1.46
Bdnf-202ENSMUST00000111042 4930546C10RikE9Q4Y3 121 aa5.92□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Gm10518F6UQQ9 182 aa5.92□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Krtap24-1G3X9A2 248 aa5.92□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Zfhx3Q61329 3726 aa5.92□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Gm10135F6TEE5 83 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 2010109I03RikQ9CQ11 111 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Lypd5Q9D7Z7 256 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Mast4Q811L6 2618 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Kmt2bO08550 2713 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Igkv4-54A0A0G2JES9 117 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Igkv6-13A0A0G2JGY3 119 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Xcl1P47993 114 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Gm10647E9Q8X0 124 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Gm9887F6RFI0 207 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 CrygdP04342 174 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 CrygeQ03740 174 aa5.91□□□□□ -1.46
Bdnf-202ENSMUST00000111042 D730001G18RikA0A087WQU7 115 aa5.9□□□□□ -1.46
Bdnf-202ENSMUST00000111042 PolqQ8CGS6 2544 aa5.9□□□□□ -1.46
Bdnf-202ENSMUST00000111042 Pcp4P63054 62 aa5.9□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Cryba4Q9JJV0 196 aa5.9□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Nf1Q04690 2841 aa5.9□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Spink4O35679 86 aa5.9□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Defa16P50714 93 aa5.9□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Spry2Q9QXV8 315 aa5.9□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Chd9Q8BYH8 2885 aa5.89□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Trbv13-2A0A140T8N6 113 aa5.89□□□□□ -1.47
Bdnf-202ENSMUST00000111042 MrapQ9D159 127 aa5.89□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Gm3233E9Q2H5 230 aa5.89□□□□□ -1.47
Bdnf-202ENSMUST00000111042 CrygaP04345 174 aa5.89□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Pglyrp4Q0VB07 374 aa5.89□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Reg3bP35230 175 aa5.88□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Gm10577Q3UDV9 132 aa5.88□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Klk12B2RVZ0 247 aa5.88□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Ly6gP35461 111 aa5.88□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Igfn1Q3KNY0 2849 aa5.88□□□□□ -1.47
Bdnf-202ENSMUST00000111042 CicQ924A2 2510 aa5.87□□□□□ -1.47
Bdnf-202ENSMUST00000111042 CenpwQ3URR0 86 aa5.87□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Trav3-4A0A075B654 114 aa5.87□□□□□ -1.47
Bdnf-202ENSMUST00000111042 E130114P18RikF6S0S7 154 aa5.86□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Lamtor3O88653 124 aa5.86□□□□□ -1.47
Bdnf-202ENSMUST00000111042 MifP34884 115 aaKnown RBP5.86□□□□□ -1.47
Bdnf-202ENSMUST00000111042 A830031A19RikQ8BNT5 113 aa5.86□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Gpha2Q925Q5 128 aa5.86□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Notch1Q01705 2531 aa5.86□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Foxc1Q61572 553 aa5.86□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Igkv2-109A0A075B5K6 120 aa5.86□□□□□ -1.47
Bdnf-202ENSMUST00000111042 A0A1Y7VJH8 109 aa5.86□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Wdr38Q9D994 303 aa5.86□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Fgf23Q9EPC2 251 aa5.85□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Igkv4-61A0A0G2JH00 117 aa5.85□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Tfpi2O35536 230 aa5.85□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Sostdc1Q9CQN4 206 aa5.85□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Wfdc12Q9JHY3 85 aa5.85□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Klk11Q9QYN3 276 aa5.85□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Akap13E9Q394 2776 aa5.85□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Hist1h4aP62806 103 aaKnown RBP5.85□□□□□ -1.47
Bdnf-202ENSMUST00000111042 CdsnQ7TPC1 561 aa5.85□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Cox8cA6H666 72 aa5.84□□□□□ -1.47
Bdnf-202ENSMUST00000111042 MobpQ9D2P8 170 aa5.84□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Zfand2aQ9JII7 171 aa5.84□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Igkv3-2A0A075B5P0 119 aa5.84□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Igkv1-88A0A140T8N1 120 aa5.84□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Odf3l2Q3TZ65 277 aa5.84□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Rpl39lQ9CQD0 51 aa5.84□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Gm10772F7AIG4 85 aa5.84□□□□□ -1.47
Bdnf-202ENSMUST00000111042 Rpl18aP62717 176 aaKnown RBP5.84□□□□□ -1.47
Bdnf-202ENSMUST00000111042 A0A286YCN5 57 aa5.83□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Gm10251J3QPM5 127 aa5.83□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Defa2P28309 93 aa5.83□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Acyp1P56376 99 aa5.83□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Celsr2Q9R0M0 2920 aa5.83□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Defa25Q5G864 92 aa5.83□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Stab1Q8R4Y4 2571 aa5.83□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Igkv8-18A0A0B4J1J3 123 aa5.83□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Ufsp1Q9CZP0 217 aa5.83□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Cox7b2Q9D2H1 82 aa5.83□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Trav14d-3-dv8A0A075B619 120 aa5.82□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Camk2n2Q78WH7 79 aa5.82□□□□□ -1.48
Bdnf-202ENSMUST00000111042 5730596B20RikQ8BQ08 205 aa5.82□□□□□ -1.48
Bdnf-202ENSMUST00000111042 LrbaQ9ESE1 2856 aa5.82□□□□□ -1.48
Bdnf-202ENSMUST00000111042 BC048502Q80Y74 154 aa5.82□□□□□ -1.48
Bdnf-202ENSMUST00000111042 MplkipQ9D011 178 aa5.82□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Cdip1Q9DB75 208 aa5.82□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Defa7P50705 93 aa5.81□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms