RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Vpreb2P13373 142 aa8.01□□□□□ -1.13
Scn8a-203ENSMUST00000108908 CnfnQ6PCW6 111 aa8□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Gm42715A0A087WP63 3095 aaKnown RBP8□□□□□ -1.13
Scn8a-203ENSMUST00000108908 1700011M02RikB1AX35 88 aa8□□□□□ -1.13
Scn8a-203ENSMUST00000108908 B430305J03RikQ8BQQ8 176 aa8□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Gm10322F7D7I4 111 aa7.99□□□□□ -1.13
Scn8a-203ENSMUST00000108908 BtcQ05928 177 aa7.99□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Mrpl52Q9D0Y8 121 aa7.99□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Ighv8-11A0A075B5X4 119 aa7.99□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Gm11011D3Z3L9 86 aa7.98□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Igkv3-12A0A140T8P0 119 aa7.98□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Gm5464Q3UY29 175 aa7.98□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Pla2g2eQ9QUL3 142 aa7.97□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Smim20D3Z7Q2 69 aa7.97□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Wdr38Q9D994 303 aa7.97□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Igkv8-30A0A140T8M3 121 aa7.97□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Sec61gP60060 68 aa7.97□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Piezo2Q8CD54 2822 aa7.96□□□□□ -1.13
Scn8a-203ENSMUST00000108908 Ly6g6cQ9Z1Q4 126 aa7.96□□□□□ -1.13
Scn8a-203ENSMUST00000108908 SrarpQ3ULG3 163 aa7.96□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Wfdc3Q14AE4 130 aa7.95□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Ep400Q8CHI8 3072 aaKnown RBP7.95□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Gm10577Q3UDV9 132 aa7.95□□□□□ -1.14
Scn8a-203ENSMUST00000108908 BC067074F6RXI4 2391 aa7.95□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Ndufc1Q9CQY9 76 aa7.95□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Tmem213Q08EA8 116 aa7.94□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Gm10300Q8C8P7 189 aa7.94□□□□□ -1.14
Scn8a-203ENSMUST00000108908 1600014C23RikQ9DAX4 101 aa7.94□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Krtap27-1E9PX37 202 aa7.93□□□□□ -1.14
Scn8a-203ENSMUST00000108908 CdsnQ7TPC1 561 aa7.93□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Rpl28P41105 137 aaKnown RBP7.93□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Dnah12Q3V0Q1 3086 aa7.93□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Q8K1L6 76 aa7.92□□□□□ -1.14
Scn8a-203ENSMUST00000108908 BaalcQ8VHV1 145 aa7.92□□□□□ -1.14
Scn8a-203ENSMUST00000108908 TeppQ6IMH0 216 aa7.92□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Adm2Q7TNK8 150 aa7.91□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Ighv8-13A0A075B5Y0 101 aa7.9□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Znf706Q9D115 76 aaKnown RBP7.9□□□□□ -1.14
Scn8a-203ENSMUST00000108908 SvipQ3UZP4 77 aa7.9□□□□□ -1.14
Scn8a-203ENSMUST00000108908 Sptbn4E9PX29 2561 aa7.9□□□□□ -1.15
Scn8a-203ENSMUST00000108908 4930556J24RikQ9D4U7 146 aa7.89□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Ighv2-9-1A0A075B697 116 aa7.89□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Q9DAB9 146 aa7.89□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Hcfc1Q61191 2045 aaKnown RBP7.89□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Rtl10D3YWW5 146 aa7.88□□□□□ -1.15
Scn8a-203ENSMUST00000108908 4930432M17RikQ3V0W9 174 aa7.88□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Gm16485Q8C4B7 115 aa7.88□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Trav14-1A0A0G2JF94 121 aa7.88□□□□□ -1.15
Scn8a-203ENSMUST00000108908 H2al1bA0A087WP11 105 aa7.88□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Gm5142Q8C5X9 133 aa7.88□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Gm17509Q9CZ61 145 aa7.87□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Igkv3-7A0A0G2JE31 119 aa7.87□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Atox1O08997 68 aaKnown RBP7.87□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Ighv2-9A0A075B5Q5 116 aa7.87□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Crip2Q9DCT8 208 aaKnown RBP7.86□□□□□ -1.15
Scn8a-203ENSMUST00000108908 2310009B15RikA0A0A6YWI4 143 aa7.86□□□□□ -1.15
Scn8a-203ENSMUST00000108908 H2al1aQ5M8Q2 105 aa7.86□□□□□ -1.15
Scn8a-203ENSMUST00000108908 H2al1eQ810S6 105 aa7.86□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Ifitm6A0A1B0GS75 124 aa7.86□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Gm28539A0A087WSL9 92 aa7.85□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Gm20604F8WIA3 75 aa7.85□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Gm10267M0QWD8 85 aa7.84□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Rif1Q6PR54 2419 aaKnown RBP7.84□□□□□ -1.15
Scn8a-203ENSMUST00000108908 Jbts17Q8CE72 3214 aa7.83□□□□□ -1.16
Scn8a-203ENSMUST00000108908 A0A286YE49 62 aa7.83□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Abca2P41234 2434 aa7.83□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Defb38Q7TNV7 63 aa7.83□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Ndufs5Q99LY9 106 aa7.83□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Igkv8-28A0A0G2JE47 121 aa7.82□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Gm28374F6SG70 93 aa7.82□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Odf3l2Q3TZ65 277 aa7.82□□□□□ -1.16
Scn8a-203ENSMUST00000108908 4930524J08RikQ9CUJ5 163 aa7.82□□□□□ -1.16
Scn8a-203ENSMUST00000108908 P84750 121 aa7.82□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Lrrk2Q5S006 2527 aa7.81□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Gm5153P01627 120 aa7.81□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Serp2Q6TAW2 65 aa7.81□□□□□ -1.16
Scn8a-203ENSMUST00000108908 C130032M10RikQ8C888 123 aa7.81□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Srsf12Q8C8K3 266 aa7.8□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Cep350E9Q309 3095 aa7.79□□□□□ -1.16
Scn8a-203ENSMUST00000108908 NpwA0A1L1STR8 176 aa7.79□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Vpreb1P13372 142 aa7.79□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Nav3Q80TN7 2359 aa7.79□□□□□ -1.16
Scn8a-203ENSMUST00000108908 CenpwQ3URR0 86 aa7.79□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Gm10135F6TEE5 83 aa7.78□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Zfyve26Q5DU37 2529 aa7.78□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Wfdc6bF6ULY1 148 aa7.78□□□□□ -1.16
Scn8a-203ENSMUST00000108908 Sprr2jO70561 109 aa7.77□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Lama3Q61789 3330 aa7.77□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Gm3250E9Q1M3 230 aa7.77□□□□□ -1.17
Scn8a-203ENSMUST00000108908 BC025920Q3US60 128 aa7.76□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Apoc4Q61268 124 aa7.76□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Spink13Q3UTS8 97 aa7.76□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Tln1P26039 2541 aaKnown RBP7.76□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Defb39Q70KL3 74 aa7.76□□□□□ -1.17
Scn8a-203ENSMUST00000108908 A830031A19RikQ8BNT5 113 aa7.76□□□□□ -1.17
Scn8a-203ENSMUST00000108908 A730009L09RikA0A1B0GS82 72 aa7.75□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Piezo1E2JF22 2547 aa7.74□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Ntn5Q3UQ22 452 aa7.74□□□□□ -1.17
Scn8a-203ENSMUST00000108908 1700074P13RikQ9D9G7 251 aa7.74□□□□□ -1.17
Scn8a-203ENSMUST00000108908 Znf580Q9DB38 172 aa7.74□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 211.7 ms