RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Rpl28P41105 137 aaKnown RBP11.42□□□□□ -0.58
Clcn3-203ENSMUST00000093490 SycnQ8VCK7 134 aa11.41□□□□□ -0.58
Clcn3-203ENSMUST00000093490 4930556J24RikQ9D4U7 146 aa11.41□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Zfyve26Q5DU37 2529 aa11.4□□□□□ -0.58
Clcn3-203ENSMUST00000093490 Q9DAB9 146 aa11.4□□□□□ -0.59
Clcn3-203ENSMUST00000093490 NpwA0A1L1STR8 176 aa11.39□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Fam19a5Q91WE9 132 aa11.39□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Znf580Q9DB38 172 aa11.39□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Ighv10-3A0A075B5T6 119 aa11.38□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Cd164l2Q9D6W7 172 aa11.37□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Tanc2A2A690 1994 aa11.37□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Serp1Q9Z1W5 66 aa11.37□□□□□ -0.59
Clcn3-203ENSMUST00000093490 OtoglF7A4A7 2325 aa11.37□□□□□ -0.59
Clcn3-203ENSMUST00000093490 A0A286YE49 62 aa11.37□□□□□ -0.59
Clcn3-203ENSMUST00000093490 PtprbB2RU80 1998 aa11.36□□□□□ -0.59
Clcn3-203ENSMUST00000093490 4930524J08RikQ9CUJ5 163 aa11.36□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Igkv1-110A0A0B4J1I0 119 aa11.36□□□□□ -0.59
Clcn3-203ENSMUST00000093490 D730001G18RikA0A087WQU7 115 aa11.36□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Gm26566Q8CAC1 153 aa11.35□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Rif1Q6PR54 2419 aaKnown RBP11.35□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Psmb11Q8BG41 302 aa11.35□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Gm11011D3Z3L9 86 aa11.35□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Sprr2jO70561 109 aa11.34□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Prrc2aQ7TSC1 2158 aaKnown RBP11.34□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Ighv8-13A0A075B5Y0 101 aa11.34□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Trbv13-2A0A140T8N6 113 aa11.34□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Ndufs5Q99LY9 106 aa11.34□□□□□ -0.59
Clcn3-203ENSMUST00000093490 Srsf12Q8C8K3 266 aa11.34□□□□□ -0.59
Clcn3-203ENSMUST00000093490 DysfQ9ESD7 2090 aa11.33□□□□□ -0.6
Clcn3-203ENSMUST00000093490 B230217C12RikE9Q3Z1 139 aa11.33□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Wfdc12Q9JHY3 85 aa11.32□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Gpha2Q925Q5 128 aa11.32□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Gm10549Q3URY4 149 aa11.31□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Gm5142Q8C5X9 133 aa11.31□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Crip3Q6Q6R3 243 aa11.31□□□□□ -0.6
Clcn3-203ENSMUST00000093490 BC025920Q3US60 128 aa11.3□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Defb40Q70KL2 73 aa11.3□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Kiaa1549Q68FD9 1940 aa11.3□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Bri3P28662 125 aa11.29□□□□□ -0.6
Clcn3-203ENSMUST00000093490 4930432M17RikQ3V0W9 174 aa11.29□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Lrrk2Q5S006 2527 aa11.29□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Trav14-1A0A0G2JF94 121 aa11.28□□□□□ -0.6
Clcn3-203ENSMUST00000093490 TeppQ6IMH0 216 aa11.28□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Ly6g6cQ9Z1Q4 126 aa11.28□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Sorl1O88307 2215 aaKnown RBP11.28□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Arid1bE9Q4N7 2244 aa11.28□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Spink13Q3UTS8 97 aa11.28□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Brwd1Q921C3 2304 aa11.27□□□□□ -0.6
Clcn3-203ENSMUST00000093490 ScxQ64124 207 aa11.27□□□□□ -0.6
Clcn3-203ENSMUST00000093490 Pcnx2Q5DU28 2122 aa11.27□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Ifitm6A0A1B0GS75 124 aa11.27□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Gm10135F6TEE5 83 aa11.26□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Gm5153P01627 120 aa11.26□□□□□ -0.61
Clcn3-203ENSMUST00000093490 CdsnQ7TPC1 561 aa11.26□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Notch3Q61982 2318 aa11.26□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Gm10845Q3UNY9 185 aa11.26□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Hivep2Q3UHF7 2430 aa11.25□□□□□ -0.61
Clcn3-203ENSMUST00000093490 A0A286YCN5 57 aa11.25□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Gm17509Q9CZ61 145 aa11.24□□□□□ -0.61
Clcn3-203ENSMUST00000093490 9230102O04RikA2ASX7 82 aa11.24□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Defb11Q8R2I7 77 aa11.24□□□□□ -0.61
Clcn3-203ENSMUST00000093490 UqcrqQ9CQ69 82 aa11.24□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Igkv8-30A0A140T8M3 121 aa11.23□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Rtl10D3YWW5 146 aa11.22□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Tln1P26039 2541 aaKnown RBP11.22□□□□□ -0.61
Clcn3-203ENSMUST00000093490 P84750 121 aa11.22□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Gm28374F6SG70 93 aa11.22□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Spata3Q9D9T6 193 aa11.21□□□□□ -0.61
Clcn3-203ENSMUST00000093490 Cdip1Q9DB75 208 aa11.21□□□□□ -0.62
Clcn3-203ENSMUST00000093490 AcanQ61282 2132 aaKnown RBP11.19□□□□□ -0.62
Clcn3-203ENSMUST00000093490 Ighv2-9A0A075B5Q5 116 aa11.19□□□□□ -0.62
Clcn3-203ENSMUST00000093490 Flg2Q2VIS4 2362 aa11.19□□□□□ -0.62
Clcn3-203ENSMUST00000093490 Chd8Q09XV5 2582 aaKnown RBP11.19□□□□□ -0.62
Clcn3-203ENSMUST00000093490 Ighv1-56A0A0A6YXG2 117 aa11.17□□□□□ -0.62
Clcn3-203ENSMUST00000093490 Crip2Q9DCT8 208 aaKnown RBP11.17□□□□□ -0.62
Clcn3-203ENSMUST00000093490 Zfand2aQ9JII7 171 aa11.17□□□□□ -0.62
Clcn3-203ENSMUST00000093490 Ntn5Q3UQ22 452 aa11.16□□□□□ -0.62
Clcn3-203ENSMUST00000093490 BC067074F6RXI4 2391 aa11.16□□□□□ -0.62
Clcn3-203ENSMUST00000093490 Odf3l2Q3TZ65 277 aa11.16□□□□□ -0.62
Clcn3-203ENSMUST00000093490 Dscaml1Q4VA61 2053 aa11.16□□□□□ -0.62
Clcn3-203ENSMUST00000093490 Defb45Q3V490 66 aa11.16□□□□□ -0.62
Clcn3-203ENSMUST00000093490 2310009B15RikA0A0A6YWI4 143 aa11.15□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Igkv3-12A0A140T8P0 119 aa11.15□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Gm43218A0A0G2JGT0 114 aa11.13□□□□□ -0.63
Clcn3-203ENSMUST00000093490 H2al1kJ3QP08 105 aa11.13□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Myo9aQ8C170 2542 aa11.13□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Sptbn4E9PX29 2561 aa11.13□□□□□ -0.63
Clcn3-203ENSMUST00000093490 3110070M22RikQ9DAQ7 118 aa11.13□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Wfdc13Q5DQQ6 81 aa11.12□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Gm16485Q8C4B7 115 aa11.12□□□□□ -0.63
Clcn3-203ENSMUST00000093490 1700074P13RikQ9D9G7 251 aa11.12□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Abca2P41234 2434 aa11.12□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Nav2E9Q842 2432 aa11.12□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Gm16181B0V2H2 73 aa11.12□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Csdc2Q91YQ3 154 aa11.1□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Apoc4Q61268 124 aa11.09□□□□□ -0.63
Clcn3-203ENSMUST00000093490 Ighv2-5A0A0A6YY69 116 aa11.08□□□□□ -0.64
Clcn3-203ENSMUST00000093490 Gm10267M0QWD8 85 aa11.08□□□□□ -0.64
Clcn3-203ENSMUST00000093490 C130032M10RikQ8C888 123 aa11.08□□□□□ -0.64
Clcn3-203ENSMUST00000093490 Igkv8-28A0A0G2JE47 121 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms