RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Dmbt1Q60997 2085 aa6.78□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Ube2bP63147 152 aa6.77□□□□□ -1.32
Hmgb1-201ENSMUST00000085546 Edn3P48299 214 aa6.77□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Tcl1b3P56842 122 aa6.77□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Coa6Q8BGD8 79 aa6.77□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Higd2aQ9CQJ1 106 aa6.77□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Srsf12Q8C8K3 266 aa6.77□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Ros1Q78DX7 2340 aa6.76□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Apc2Q9Z1K7 2274 aa6.76□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Cacna1bO55017 2327 aa6.76□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Igkv4-68A0A0B4J1I7 117 aa6.76□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Cd59aO55186 123 aa6.76□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 P01755 137 aa6.76□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Defb25Q30KN8 71 aa6.76□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Map1aQ9QYR6 2776 aa6.75□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Zfhx4Q9JJN2 3550 aa6.75□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Zzef1Q5SSH7 2924 aa6.75□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Atox1O08997 68 aaKnown RBP6.75□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Plac8l1Q08EJ0 177 aa6.75□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Gm10837Q3UTT8 145 aa6.75□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Mrps21P58059 87 aa6.74□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Dynlrb2Q9DAJ5 96 aa6.74□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Trav13-4-dv7A0A075B6C2 110 aa6.74□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 A0A286YE02 88 aa6.74□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Spink6Q8BT20 105 aa6.74□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Igkv8-18A0A0B4J1J3 123 aa6.73□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 BC048502Q80Y74 154 aa6.73□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Ighv2-7A0A075B5Q8 116 aa6.73□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 A730071L15RikQ8C4X0 137 aa6.73□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 B230359F08RikA0A0B4J1K3 109 aa6.72□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Cd99Q8VCN6 175 aa6.72□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Ube2e2Q91W82 201 aa6.72□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 3110018I06RikQ9CXS0 120 aa6.72□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Igkv8-34A0A0G2JDU0 121 aa6.72□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Trav13-1A0A075B644 110 aa6.72□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Rev3lQ61493 3122 aa6.72□□□□□ -1.33
Hmgb1-201ENSMUST00000085546 Gm10320E9PW43 113 aa6.71□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 P01738 130 aa6.71□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Lmo4P61969 165 aa6.71□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 FshbQ60687 130 aa6.71□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Prr9Q8BV84 116 aa6.71□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Pgpep1lQ9CWB5 130 aa6.71□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 4930470P17RikQ9D542 155 aa6.71□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 F8Q06194 2319 aa6.71□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Klk12B2RVZ0 247 aa6.71□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Gm9513B3GLJ6 99 aa6.71□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Coa5Q99M07 74 aa6.7□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Ube2aQ9Z255 152 aa6.7□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 MsmbO08540 113 aa6.7□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Phf5aP83870 110 aaKnown RBP6.7□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Cmya5Q70KF4 3739 aa6.69□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Phxr4P15974 95 aa6.69□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 9530003J23RikQ8BM26 151 aa6.69□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Wfdc15aQ8BH89 80 aa6.69□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Col6a4A2AX52 2309 aa6.69□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 RelnQ60841 3461 aa6.69□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Cep250Q60952 2414 aa6.68□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Bri3P28662 125 aa6.68□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Pla2g2aP31482 146 aa6.68□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Gm5617Q91VN2 117 aa6.68□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Gm17509Q9CZ61 145 aa6.68□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Krtap11-1E9Q2E9 183 aa6.68□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Hes7Q8BKT2 225 aa6.67□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 E130116L18RikQ8BMV6 101 aa6.67□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Igkv8-24A0A140T8P5 121 aa6.66□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 1810032O08RikE9PZV8 113 aa6.66□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Gm7075D3Z497 112 aa6.66□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Gm10770F7D043 238 aa6.66□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 MobpQ9D2P8 170 aa6.65□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Qrich2A0A140LIY9 2337 aa6.65□□□□□ -1.34
Hmgb1-201ENSMUST00000085546 Ccl3P10855 92 aa6.65□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Igkv8-28A0A0G2JE47 121 aa6.64□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Igkv4-58A0A0G2JGI6 119 aa6.64□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Igkv3-3A0A140T8Q0 119 aa6.64□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Spink1P09036 80 aa6.64□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Prr15lQ8JZM2 100 aa6.64□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Gm3646F6S692 53 aa6.64□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Klk9Q32M27 251 aa6.64□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Wdfy4E9Q2M9 3149 aa6.64□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Prp2P05143 317 aa6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Zfhx2Q2MHN3 2562 aa6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Trav9-2A0A075B647 113 aa6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Trav13d-4A0A0G2JFX3 110 aa6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Gm815Q3UWS2 115 aa6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Usmg5Q78IK2 58 aa6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 TprF6ZDS4 2431 aaKnown RBP6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Dmxl2Q8BPN8 3032 aa6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Trav9n-2A0A0G2JDP3 113 aa6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 6430550D23RikE9Q1X6 194 aa6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Cox7bP56393 80 aa6.63□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 DspE9Q557 2883 aaKnown RBP6.62□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Igkv4-92A0A0B4J1I2 117 aa6.62□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Igkv8-19A0A0G2JFN8 121 aa6.62□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Smg1Q8BKX6 3658 aaKnown RBP6.62□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Muc4Q8JZM8 3443 aa6.61□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Q99M08 65 aa6.61□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Gm9805F6YK59 57 aa6.61□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Cnot1Q6ZQ08 2375 aaKnown RBP6.61□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Igkv1-88A0A140T8N1 120 aa6.6□□□□□ -1.35
Hmgb1-201ENSMUST00000085546 Cacna1aP97445 2368 aa6.6□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms