RNA–Protein interactions for RNA: ENSMUST00000042617.13

Clcnka-201, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-201ENSMUST00000042617 Serp2Q6TAW2 65 aa10.29□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Gm815Q3UWS2 115 aa10.28□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Trav9n-2A0A0G2JDP3 113 aa10.28□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Trav9d-4A0A0G2JG37 103 aa10.28□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Gm16381A0A1Y7VKT9 73 aa10.28□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Zfp462B1AWL2 2495 aaKnown RBP10.28□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Notch3Q61982 2318 aa10.28□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Ighv2-9-1A0A075B697 116 aa10.27□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Igkv1-35A0A0G2JDE5 120 aa10.27□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Cdc42se2Q8BGH7 84 aa10.27□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Srsf12Q8C8K3 266 aa10.27□□□□□ -0.76
Clcnka-201ENSMUST00000042617 Setd2E9Q5F9 2537 aa10.27□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Igkv1-117A0A140T8M0 119 aa10.27□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Gm19935A0A1B0GSF9 52 aa10.27□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Gm9513B3GLJ6 99 aa10.27□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Samd13D3YUG0 102 aa10.27□□□□□ -0.77
Clcnka-201ENSMUST00000042617 P01738 130 aa10.27□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Fam110dQ80X91 271 aa10.27□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Reg3gO09049 174 aa10.26□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Hbb-b2P02089 147 aa10.26□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Ighv1-56A0A0A6YXG2 117 aa10.26□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Igkv6-13A0A0G2JGY3 119 aa10.26□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Klk1b4P00757 256 aa10.26□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Ndufa12Q7TMF3 145 aaKnown RBP10.26□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Gm3250E9Q1M3 230 aa10.25□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Gm10647E9Q8X0 124 aa10.25□□□□□ -0.77
Clcnka-201ENSMUST00000042617 P01786 117 aa10.25□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Cystm1Q8K353 104 aa10.25□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Fbn1Q61554 2873 aaKnown RBP10.25□□□□□ -0.77
Clcnka-201ENSMUST00000042617 GfyJ3KML8 504 aa10.25□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Plac8l1Q08EJ0 177 aa10.25□□□□□ -0.77
Clcnka-201ENSMUST00000042617 4930470P17RikQ9D542 155 aa10.25□□□□□ -0.77
Clcnka-201ENSMUST00000042617 P01729 129 aa10.24□□□□□ -0.77
Clcnka-201ENSMUST00000042617 P01745 121 aa10.24□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Defa7P50705 93 aa10.24□□□□□ -0.77
Clcnka-201ENSMUST00000042617 4930544G11RikQ9CR99 193 aa10.24□□□□□ -0.77
Clcnka-201ENSMUST00000042617 MifP34884 115 aaKnown RBP10.24□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Defb29Q8BGW9 78 aa10.24□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Q99M08 65 aa10.24□□□□□ -0.77
Clcnka-201ENSMUST00000042617 1810062G17RikG3X8Y2 129 aa10.23□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Rpl36aP83882 106 aaKnown RBP10.23□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Tmem86bQ497J1 226 aa10.23□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Defa21Q8C1P2 93 aa10.23□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Trbv30A0A0B4J1P1 111 aa10.22□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Tmem243B2RVB9 118 aa10.22□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Tmem254aP0DN89 123 aa10.22□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Tmem254bP0DN90 123 aa10.22□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Tmem254cP0DN91 123 aa10.22□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Ube2e2Q91W82 201 aa10.22□□□□□ -0.77
Clcnka-201ENSMUST00000042617 Ifitm6A0A1B0GS75 124 aa10.21□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Defb50Q6TU36 73 aa10.21□□□□□ -0.78
Clcnka-201ENSMUST00000042617 CrygaP04345 174 aa10.2□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Pfn2Q9JJV2 140 aa10.2□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Wnk1P83741 2377 aa10.2□□□□□ -0.78
Clcnka-201ENSMUST00000042617 H2al1aQ5M8Q2 105 aa10.19□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Trav13-4-dv7A0A075B6C2 110 aa10.19□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Zfp951A0A087WRH0 451 aa10.19□□□□□ -0.78
Clcnka-201ENSMUST00000042617 9430015G10RikA2ASP7 199 aa10.19□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Spink1P09036 80 aa10.19□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Gm7849D3YX03 116 aa10.18□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Ppp1r32Q148A4 427 aa10.18□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Zfand2aQ9JII7 171 aa10.18□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Smim26Q3V460 107 aa10.17□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Naa38Q9D2U5 125 aa10.17□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Ube2d4D3YUH6 135 aa10.17□□□□□ -0.78
Clcnka-201ENSMUST00000042617 GhrhP16043 103 aa10.17□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Tmem223Q9CQE2 199 aaKnown RBP10.16□□□□□ -0.78
Clcnka-201ENSMUST00000042617 AtrQ9JKK8 2635 aa10.16□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Igkv1-99F6XWB2 120 aa10.16□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Fam19a5Q91WE9 132 aa10.16□□□□□ -0.78
Clcnka-201ENSMUST00000042617 CicQ924A2 2510 aa10.16□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Hspg2Q05793 3707 aaKnown RBP10.16□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Krtap16-1A2A5X5 502 aa10.15□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Erdr1J3QMM0 206 aa10.15□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Gm7102J3QQ10 178 aa10.15□□□□□ -0.78
Clcnka-201ENSMUST00000042617 P01755 137 aa10.15□□□□□ -0.78
Clcnka-201ENSMUST00000042617 Ucn2Q99ML8 113 aa10.14□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Gm3233E9Q2H5 230 aa10.13□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Prp2P05143 317 aa10.13□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Gm10308Q9CVR5 141 aa10.13□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Itpr2Q9Z329 2701 aa10.12□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Gm8439G3UWA7 96 aa10.12□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Gm5142Q8C5X9 133 aa10.12□□□□□ -0.79
Clcnka-201ENSMUST00000042617 MobpQ9D2P8 170 aa10.12□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Defb26Q30KN7 186 aa10.12□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Gm10845Q3UNY9 185 aa10.12□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Q9DAA7 145 aa10.12□□□□□ -0.79
Clcnka-201ENSMUST00000042617 B230359F08RikA0A0B4J1K3 109 aa10.11□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Trav13n-2A0A0G2JF93 110 aa10.11□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Gm3443F7CCV5 94 aa10.11□□□□□ -0.79
Clcnka-201ENSMUST00000042617 E130208F15RikQ3UPV3 143 aa10.11□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Gm10772F7AIG4 85 aa10.1□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Rpl39lQ9CQD0 51 aa10.09□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Rnase1P00683 149 aa10.09□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Crlf1Q9JM58 425 aa10.09□□□□□ -0.79
Clcnka-201ENSMUST00000042617 Ighv10-3A0A075B5T6 119 aa10.08□□□□□ -0.8
Clcnka-201ENSMUST00000042617 Ighv13-2A0A0A6YWN3 119 aa10.08□□□□□ -0.8
Clcnka-201ENSMUST00000042617 Igkv8-21A0A140T8P7 120 aa10.08□□□□□ -0.8
Clcnka-201ENSMUST00000042617 Defa23Q5G866 93 aa10.08□□□□□ -0.8
Clcnka-201ENSMUST00000042617 Fam19a1Q7TPG8 133 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 84.7 ms