RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 3110070M22RikQ9DAQ7 118 aa7.37□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Smim20D3Z7Q2 69 aa7.36□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Obox2E9PXV9 151 aa7.36□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Vpreb2P13373 142 aa7.36□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 CenpwQ3URR0 86 aa7.36□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Naa38Q9D2U5 125 aa7.36□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Gm43218A0A0G2JGT0 114 aa7.35□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Ighv8-13A0A075B5Y0 101 aa7.35□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 D730001G18RikA0A087WQU7 115 aa7.35□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Pkd1l2Q7TN88 2461 aa7.35□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Rnf152Q8BG47 203 aa7.35□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 9530003J23RikQ8BM26 151 aa7.34□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 EnhoQ8K1D8 76 aa7.34□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Gpha2Q925Q5 128 aa7.34□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 NpwA0A1L1STR8 176 aa7.34□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Odf3l2Q3TZ65 277 aa7.34□□□□□ -1.23
Ccdc40-201ENSMUST00000035935 Wfdc15aQ8BH89 80 aa7.33□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Abca2P41234 2434 aa7.33□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Ccdc179J3QM76 67 aa7.33□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 4930524J08RikQ9CUJ5 163 aa7.33□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Serp2Q6TAW2 65 aa7.33□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Brk1Q91VR8 75 aa7.33□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Trav14-1A0A0G2JF94 121 aa7.33□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Zfand2aQ9JII7 171 aa7.33□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Vpreb3D3Z6J4 130 aa7.32□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Ankhd1E9PUR0 2548 aaKnown RBP7.32□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Wfdc10Q3V2J9 124 aa7.32□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Ighv2-9A0A075B5Q5 116 aa7.31□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Crip2Q9DCT8 208 aaKnown RBP7.31□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Defb45Q3V490 66 aa7.31□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Gm5142Q8C5X9 133 aa7.31□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Spink13Q3UTS8 97 aa7.31□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Wfdc12Q9JHY3 85 aa7.31□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Gm17509Q9CZ61 145 aa7.3□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Igkv4-92A0A0B4J1I2 117 aa7.3□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 TrrapQ80YV3 2565 aaKnown RBP7.3□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Mrpl52Q9D0Y8 121 aa7.3□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Ttc28Q80XJ3 2450 aa7.3□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 C2cd3Q52KB6 2323 aa7.3□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Prr15lQ8JZM2 100 aa7.29□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Fam19a5Q91WE9 132 aa7.29□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 BC067074F6RXI4 2391 aa7.29□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Igkv3-10A0A0G2JGN0 119 aa7.29□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Gm11011D3Z3L9 86 aa7.29□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 U90926O08546 118 aa7.29□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Gm5153P01627 120 aa7.29□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 TroQ6DIC6 2087 aa7.28□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Gm10845Q3UNY9 185 aa7.28□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 SycnQ8VCK7 134 aa7.28□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Gm10135F6TEE5 83 aa7.28□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 Ighv8-11A0A075B5X4 119 aa7.28□□□□□ -1.24
Ccdc40-201ENSMUST00000035935 2310009B15RikA0A0A6YWI4 143 aa7.27□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Notch2O35516 2470 aa7.27□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 A830031A19RikQ8BNT5 113 aa7.27□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 A0A286YCN5 57 aa7.26□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Sprr2jO70561 109 aa7.26□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 CrygaP04345 174 aa7.26□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 P06320 134 aa7.26□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Gm10300Q8C8P7 189 aa7.26□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Arhgap32Q811P8 2089 aa7.26□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Psors1c2Q80ZC9 134 aa7.26□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Gm12057A0A087WR21 115 aa7.25□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Igkv3-4A0A140T8Q4 119 aa7.25□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 TeppQ6IMH0 216 aa7.25□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Ighv1-56A0A0A6YXG2 117 aa7.25□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Gm26661M0QWV4 156 aa7.25□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 BaalcQ8VHV1 145 aa7.25□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Znf706Q9D115 76 aaKnown RBP7.24□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Atox1O08997 68 aaKnown RBP7.24□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Nupr2Q497P3 102 aa7.24□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Ighv10-3A0A075B5T6 119 aa7.23□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Pou2af1Q64693 256 aa7.23□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 4930535I16RikQ9CUI2 172 aa7.23□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Gm42715A0A087WP63 3095 aaKnown RBP7.23□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 PolqQ8CGS6 2544 aa7.22□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 CdsnQ7TPC1 561 aa7.22□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 MobpQ9D2P8 170 aa7.22□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Defb12Q8K4N3 78 aa7.22□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Usp9xP70398 2559 aaKnown RBP7.22□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Ifitm6A0A1B0GS75 124 aa7.21□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 PscaP57096 123 aa7.21□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Sox16Q62247 57 aa7.21□□□□□ -1.25
Ccdc40-201ENSMUST00000035935 Csdc2Q91YQ3 154 aa7.21□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Cdip1Q9DB75 208 aa7.21□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Gm19935A0A1B0GSF9 52 aa7.2□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Hivep2Q3UHF7 2430 aa7.2□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Vpreb1P13372 142 aa7.2□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Gm9887F6RFI0 207 aa7.19□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 SvipQ3UZP4 77 aa7.19□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Defb10Q8R2I8 73 aa7.19□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Igkv8-21A0A140T8P7 120 aa7.19□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 P01819 144 aa7.18□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Igkv1-117A0A140T8M0 119 aa7.18□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Gm16485Q8C4B7 115 aa7.18□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Ntn5Q3UQ22 452 aa7.17□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Defb13Q8R2I4 64 aa7.17□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Gm9903Q8C9Y8 129 aa7.17□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 A0A286YE49 62 aa7.17□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 SptssbQ925E8 76 aa7.16□□□□□ -1.26
Ccdc40-201ENSMUST00000035935 Defb40Q70KL2 73 aa7.15□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms