RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Cox17P56394 63 aa7.89□□□□□ -1.15
Msh3-201ENSMUST00000022220 Wfdc15aQ8BH89 80 aa7.89□□□□□ -1.15
Msh3-201ENSMUST00000022220 Igkv8-16A0A0G2JDG9 121 aa7.88□□□□□ -1.15
Msh3-201ENSMUST00000022220 Ighv1-72P01751 139 aa7.88□□□□□ -1.15
Msh3-201ENSMUST00000022220 Ndufa12Q7TMF3 145 aaKnown RBP7.88□□□□□ -1.15
Msh3-201ENSMUST00000022220 Ighv1-66A0A075B5X5 117 aa7.88□□□□□ -1.15
Msh3-201ENSMUST00000022220 Igkv3-9A0A140T8P4 119 aa7.88□□□□□ -1.15
Msh3-201ENSMUST00000022220 Gm16381A0A1Y7VKT9 73 aa7.88□□□□□ -1.15
Msh3-201ENSMUST00000022220 BC025920Q3US60 128 aa7.88□□□□□ -1.15
Msh3-201ENSMUST00000022220 Vps13cQ8BX70 3748 aa7.88□□□□□ -1.15
Msh3-201ENSMUST00000022220 Brk1Q91VR8 75 aa7.88□□□□□ -1.15
Msh3-201ENSMUST00000022220 Pglyrp1O88593 182 aa7.87□□□□□ -1.15
Msh3-201ENSMUST00000022220 TeppQ6IMH0 216 aa7.87□□□□□ -1.15
Msh3-201ENSMUST00000022220 Ppp1r32Q148A4 427 aa7.87□□□□□ -1.15
Msh3-201ENSMUST00000022220 Mrpl55Q9CZ83 127 aa7.87□□□□□ -1.15
Msh3-201ENSMUST00000022220 E130218I03RikA0A0U1RNU5 63 aa7.87□□□□□ -1.15
Msh3-201ENSMUST00000022220 Bri3P28662 125 aa7.86□□□□□ -1.15
Msh3-201ENSMUST00000022220 5730596B20RikQ8BQ08 205 aa7.86□□□□□ -1.15
Msh3-201ENSMUST00000022220 Ighv8-11A0A075B5X4 119 aa7.85□□□□□ -1.15
Msh3-201ENSMUST00000022220 Ighv1-5A0A0A6YWG2 117 aa7.85□□□□□ -1.15
Msh3-201ENSMUST00000022220 Igkv4-68A0A0B4J1I7 117 aa7.85□□□□□ -1.15
Msh3-201ENSMUST00000022220 B230359F08RikA0A0B4J1K3 109 aa7.85□□□□□ -1.15
Msh3-201ENSMUST00000022220 B230217C12RikE9Q3Z1 139 aa7.85□□□□□ -1.15
Msh3-201ENSMUST00000022220 MplkipQ9D011 178 aa7.85□□□□□ -1.15
Msh3-201ENSMUST00000022220 1700010B08RikQ9DAI7 102 aa7.85□□□□□ -1.15
Msh3-201ENSMUST00000022220 P01729 129 aa7.85□□□□□ -1.15
Msh3-201ENSMUST00000022220 Trav13-2A0A075B649 110 aa7.85□□□□□ -1.15
Msh3-201ENSMUST00000022220 Trav4-3A0A0B4J1K1 110 aa7.85□□□□□ -1.15
Msh3-201ENSMUST00000022220 Psmb11Q8BG41 302 aa7.84□□□□□ -1.15
Msh3-201ENSMUST00000022220 Eif4ebp1Q60876 117 aa7.84□□□□□ -1.15
Msh3-201ENSMUST00000022220 Cdk2ap2Q9CPY4 127 aa7.84□□□□□ -1.15
Msh3-201ENSMUST00000022220 Lage3Q9CR70 148 aa7.84□□□□□ -1.15
Msh3-201ENSMUST00000022220 Defa27F2Z403 93 aa7.84□□□□□ -1.16
Msh3-201ENSMUST00000022220 P01745 121 aa7.84□□□□□ -1.16
Msh3-201ENSMUST00000022220 GhrhP16043 103 aa7.84□□□□□ -1.16
Msh3-201ENSMUST00000022220 Timm17bQ9Z0V7 172 aa7.84□□□□□ -1.16
Msh3-201ENSMUST00000022220 Ighv2-6-8A0A0A6YWY9 116 aa7.83□□□□□ -1.16
Msh3-201ENSMUST00000022220 Srsf12Q8C8K3 266 aa7.83□□□□□ -1.16
Msh3-201ENSMUST00000022220 CrygfQ9CXV3 174 aa7.83□□□□□ -1.16
Msh3-201ENSMUST00000022220 Reg3dQ9QUS9 175 aa7.83□□□□□ -1.16
Msh3-201ENSMUST00000022220 Gm17472A0A075B683 117 aa7.83□□□□□ -1.16
Msh3-201ENSMUST00000022220 Ighv1-11A0A0A6YWI9 117 aa7.83□□□□□ -1.16
Msh3-201ENSMUST00000022220 Igkv4-69A0A0B4J1I6 116 aa7.83□□□□□ -1.16
Msh3-201ENSMUST00000022220 P01823 113 aa7.83□□□□□ -1.16
Msh3-201ENSMUST00000022220 Klk11Q9QYN3 276 aa7.83□□□□□ -1.16
Msh3-201ENSMUST00000022220 Smg1Q8BKX6 3658 aaKnown RBP7.82□□□□□ -1.16
Msh3-201ENSMUST00000022220 Defb42Q8BVB5 75 aa7.82□□□□□ -1.16
Msh3-201ENSMUST00000022220 Q9DAB9 146 aa7.82□□□□□ -1.16
Msh3-201ENSMUST00000022220 Trav13-1A0A075B644 110 aa7.82□□□□□ -1.16
Msh3-201ENSMUST00000022220 4930564D02RikQ9D4S4 103 aa7.82□□□□□ -1.16
Msh3-201ENSMUST00000022220 Cd164l2Q9D6W7 172 aa7.82□□□□□ -1.16
Msh3-201ENSMUST00000022220 AI854703Q8BIN3 203 aa7.81□□□□□ -1.16
Msh3-201ENSMUST00000022220 Pla2g1bQ9Z0Y2 146 aa7.81□□□□□ -1.16
Msh3-201ENSMUST00000022220 Ighv1-63A0A075B5X2 117 aa7.81□□□□□ -1.16
Msh3-201ENSMUST00000022220 Ly6gP35461 111 aa7.81□□□□□ -1.16
Msh3-201ENSMUST00000022220 MifP34884 115 aaKnown RBP7.81□□□□□ -1.16
Msh3-201ENSMUST00000022220 Rpl18aP62717 176 aaKnown RBP7.81□□□□□ -1.16
Msh3-201ENSMUST00000022220 Trav13n-2A0A0G2JF93 110 aa7.8□□□□□ -1.16
Msh3-201ENSMUST00000022220 Gm9922Q8C3P1 144 aa7.8□□□□□ -1.16
Msh3-201ENSMUST00000022220 4930535I16RikQ9CUI2 172 aa7.8□□□□□ -1.16
Msh3-201ENSMUST00000022220 4930518I15RikQ3V2W7 57 aa7.8□□□□□ -1.16
Msh3-201ENSMUST00000022220 Muc5acE9QAQ8 3455 aa7.8□□□□□ -1.16
Msh3-201ENSMUST00000022220 Igkv4-53A0A0G2JFC6 119 aa7.8□□□□□ -1.16
Msh3-201ENSMUST00000022220 Reg3bP35230 175 aa7.8□□□□□ -1.16
Msh3-201ENSMUST00000022220 Tm2d2Q8R0I4 213 aa7.79□□□□□ -1.16
Msh3-201ENSMUST00000022220 Cd99Q8VCN6 175 aa7.79□□□□□ -1.16
Msh3-201ENSMUST00000022220 Defa28D3Z1V9 94 aa7.79□□□□□ -1.16
Msh3-201ENSMUST00000022220 Serp2Q6TAW2 65 aa7.78□□□□□ -1.16
Msh3-201ENSMUST00000022220 Eif4ebp3Q80VV3 101 aa7.78□□□□□ -1.16
Msh3-201ENSMUST00000022220 2010109I03RikQ9CQ11 111 aa7.78□□□□□ -1.16
Msh3-201ENSMUST00000022220 Tmem254aP0DN89 123 aa7.77□□□□□ -1.17
Msh3-201ENSMUST00000022220 Tmem254bP0DN90 123 aa7.77□□□□□ -1.17
Msh3-201ENSMUST00000022220 Tmem254cP0DN91 123 aa7.77□□□□□ -1.17
Msh3-201ENSMUST00000022220 Gm9887F6RFI0 207 aa7.77□□□□□ -1.17
Msh3-201ENSMUST00000022220 Tmem258P61166 79 aa7.77□□□□□ -1.17
Msh3-201ENSMUST00000022220 ScxQ64124 207 aa7.77□□□□□ -1.17
Msh3-201ENSMUST00000022220 Ubl5Q9EPV8 73 aa7.77□□□□□ -1.17
Msh3-201ENSMUST00000022220 Csmd1Q923L3 3564 aa7.77□□□□□ -1.17
Msh3-201ENSMUST00000022220 Mrpl52Q9D0Y8 121 aa7.76□□□□□ -1.17
Msh3-201ENSMUST00000022220 Ighv1-61P01749 117 aa7.76□□□□□ -1.17
Msh3-201ENSMUST00000022220 CrygdP04342 174 aa7.76□□□□□ -1.17
Msh3-201ENSMUST00000022220 Acyp1P56376 99 aa7.76□□□□□ -1.17
Msh3-201ENSMUST00000022220 Gm10322F7D7I4 111 aa7.76□□□□□ -1.17
Msh3-201ENSMUST00000022220 BikO70337 150 aa7.76□□□□□ -1.17
Msh3-201ENSMUST00000022220 Fxyd5P97808 178 aa7.76□□□□□ -1.17
Msh3-201ENSMUST00000022220 Igkv4-78A0A0A6YYE5 119 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 Igkv4-61A0A0G2JH00 117 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 1700011M02RikB1AX35 88 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 A830031A19RikQ8BNT5 113 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 3110070M22RikQ9DAQ7 118 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 Lama5Q61001 3718 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 Ighv1-62-1A0A075B5U3 116 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 Gm9747Q810H1 104 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 Znf580Q9DB38 172 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 Igkv2-109A0A075B5K6 120 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 E130114P18RikF6S0S7 154 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 Gm10518F6UQQ9 182 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 Gm10509O88255 85 aa7.75□□□□□ -1.17
Msh3-201ENSMUST00000022220 Igkv4-79A0A075B5L8 119 aa7.74□□□□□ -1.17
Msh3-201ENSMUST00000022220 A0A286YCN5 57 aa7.74□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 65.2 ms