RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Polr2kQ63871 58 aa8.69□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Tmem223Q9CQE2 199 aaKnown RBP8.69□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Igfn1Q3KNY0 2849 aa8.69□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Zzef1Q5SSH7 2924 aa8.69□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Igkv2-109A0A075B5K6 120 aa8.69□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Gm17577J3QNF7 156 aa8.69□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Fgfbp3Q1HCM0 245 aa8.69□□□□□ -1.02
Ctr9-201ENSMUST00000005749 RelnQ60841 3461 aa8.69□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Trbv13-2A0A140T8N6 113 aa8.68□□□□□ -1.02
Ctr9-201ENSMUST00000005749 BC107364E9Q5A2 140 aa8.68□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Celsr2Q9R0M0 2920 aa8.67□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Ighv2-6A0A075B6A7 116 aa8.67□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Igkv3-10A0A0G2JGN0 119 aa8.67□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Defa7P50705 93 aa8.67□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Iglc1A0A0G2JE99 106 aa8.67□□□□□ -1.02
Ctr9-201ENSMUST00000005749 P01843 105 aa8.67□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Gata1P17679 413 aa8.67□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Chchd7Q8K2Q5 85 aa8.67□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Nupr2Q497P3 102 aa8.67□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Gm10509O88255 85 aa8.66□□□□□ -1.02
Ctr9-201ENSMUST00000005749 HrnrQ8VHD8 2496 aa8.66□□□□□ -1.02
Ctr9-201ENSMUST00000005749 P01823 113 aa8.66□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Tnfrsf23Q9ER63 176 aa8.66□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Ramp1Q9WTJ5 148 aa8.66□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Q9DAB9 146 aa8.65□□□□□ -1.02
Ctr9-201ENSMUST00000005749 Sigmar1O55242 223 aa8.65□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Shisa2Q8QZV2 295 aa8.65□□□□□ -1.03
Ctr9-201ENSMUST00000005749 CtrlQ9ER05 264 aa8.65□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Gm10251J3QPM5 127 aa8.64□□□□□ -1.03
Ctr9-201ENSMUST00000005749 P0C913 63 aa8.64□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Trank1Q8BV79 2999 aa8.64□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Defa2P28309 93 aa8.64□□□□□ -1.03
Ctr9-201ENSMUST00000005749 P06329 120 aa8.63□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Ube2d3P61079 147 aa8.63□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Ube2d2P62838 147 aa8.63□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Ighv1-62-1A0A075B5U3 116 aa8.63□□□□□ -1.03
Ctr9-201ENSMUST00000005749 B9d2Q3UK10 175 aa8.63□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Fam19a1Q7TPG8 133 aa8.63□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Znf580Q9DB38 172 aa8.63□□□□□ -1.03
Ctr9-201ENSMUST00000005749 P01755 137 aa8.62□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Ube2aQ9Z255 152 aa8.62□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Gm10322F7D7I4 111 aa8.62□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Ly6gP35461 111 aa8.62□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Defa21Q8C1P2 93 aa8.62□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Defa25Q5G864 92 aa8.61□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Fam19a5Q91WE9 132 aa8.61□□□□□ -1.03
Ctr9-201ENSMUST00000005749 AngP21570 145 aa8.61□□□□□ -1.03
Ctr9-201ENSMUST00000005749 1700010B08RikQ9DAI7 102 aa8.61□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Gm10295Q8CCF3 114 aa8.61□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Gpha2Q925Q5 128 aa8.6□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Gm45213A0A0U1RNZ6 101 aa8.59□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Xcl1P47993 114 aa8.59□□□□□ -1.03
Ctr9-201ENSMUST00000005749 Cdc42se2Q8BGH7 84 aa8.59□□□□□ -1.03
Ctr9-201ENSMUST00000005749 CdsnQ7TPC1 561 aa8.58□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Eif4ebp1Q60876 117 aa8.58□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Gm7137J3QMW1 236 aa8.57□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Nf1Q04690 2841 aa8.57□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Igkv4-92A0A0B4J1I2 117 aa8.57□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Rbmy1bQ60990 380 aa8.57□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Ighv2-6-8A0A0A6YWY9 116 aa8.57□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Ubl5Q9EPV8 73 aa8.56□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Defa23Q5G866 93 aa8.56□□□□□ -1.04
Ctr9-201ENSMUST00000005749 ScxQ64124 207 aa8.56□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Ly6hQ9WUC3 139 aa8.56□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Ighv1-61P01749 117 aa8.56□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Igkv8-18A0A0B4J1J3 123 aa8.56□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Cox7cP17665 63 aa8.56□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Trav4d-3A0A075B625 110 aa8.55□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Gm1968Q3T9I3 115 aa8.55□□□□□ -1.04
Ctr9-201ENSMUST00000005749 LrbaQ9ESE1 2856 aa8.55□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Rpl32P62911 135 aaKnown RBP8.55□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Igkv3-5A0A140T8M6 119 aa8.54□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Ube2d1P61080 147 aaKnown RBP8.54□□□□□ -1.04
Ctr9-201ENSMUST00000005749 PpdpfQ9CR37 115 aa8.54□□□□□ -1.04
Ctr9-201ENSMUST00000005749 9430015G10RikA2ASP7 199 aa8.54□□□□□ -1.04
Ctr9-201ENSMUST00000005749 SrarpQ3ULG3 163 aa8.53□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Trav3-4A0A075B654 114 aa8.53□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Itpr2Q9Z329 2701 aa8.53□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Ighv8-5A0A0A6YY60 119 aa8.53□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Tmem243B2RVB9 118 aa8.53□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Tfpi2O35536 230 aa8.53□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Rpl39lQ9CQD0 51 aa8.53□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Fgf23Q9EPC2 251 aa8.53□□□□□ -1.04
Ctr9-201ENSMUST00000005749 CnfnQ6PCW6 111 aa8.53□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Tax1bp3Q9DBG9 124 aa8.53□□□□□ -1.04
Ctr9-201ENSMUST00000005749 Wfdc13Q5DQQ6 81 aa8.52□□□□□ -1.05
Ctr9-201ENSMUST00000005749 SycnQ8VCK7 134 aa8.52□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Krtap27-1E9PX37 202 aa8.52□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Trav4-3A0A0B4J1K1 110 aa8.52□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Gm7138L7N2C3 230 aa8.52□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Gm16485Q8C4B7 115 aa8.52□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Gm3238W4VSP7 230 aa8.52□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Ighv8-11A0A075B5X4 119 aa8.51□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Spink4O35679 86 aa8.51□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Igkv4-58A0A0G2JGI6 119 aa8.5□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Obox2E9PXV9 151 aa8.5□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Gm37389A0A0A6YW05 95 aa8.49□□□□□ -1.05
Ctr9-201ENSMUST00000005749 1700011M02RikB1AX35 88 aa8.49□□□□□ -1.05
Ctr9-201ENSMUST00000005749 1600014C23RikQ9DAX4 101 aa8.49□□□□□ -1.05
Ctr9-201ENSMUST00000005749 Rnf152Q8BG47 203 aa8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms