RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Cdc42se2Q8BGH7 84 aa9.49□□□□□ -0.89
Traf6-201ENSMUST00000004949 4930535I16RikQ9CUI2 172 aa9.49□□□□□ -0.89
Traf6-201ENSMUST00000004949 Igkv3-3A0A140T8Q0 119 aa9.49□□□□□ -0.89
Traf6-201ENSMUST00000004949 Rbm3O89086 153 aaKnown RBP9.48□□□□□ -0.89
Traf6-201ENSMUST00000004949 5730596B20RikQ8BQ08 205 aa9.47□□□□□ -0.89
Traf6-201ENSMUST00000004949 CtrlQ9ER05 264 aa9.47□□□□□ -0.89
Traf6-201ENSMUST00000004949 Q9DAQ5 155 aa9.47□□□□□ -0.89
Traf6-201ENSMUST00000004949 Myo18bE9PV66 2605 aa9.46□□□□□ -0.89
Traf6-201ENSMUST00000004949 Acyp1P56376 99 aa9.46□□□□□ -0.89
Traf6-201ENSMUST00000004949 Srsf12Q8C8K3 266 aa9.45□□□□□ -0.9
Traf6-201ENSMUST00000004949 Ormdl1Q921I0 153 aa9.45□□□□□ -0.9
Traf6-201ENSMUST00000004949 Pcp4P63054 62 aa9.45□□□□□ -0.9
Traf6-201ENSMUST00000004949 Ighv8-5A0A0A6YY60 119 aa9.45□□□□□ -0.9
Traf6-201ENSMUST00000004949 1600014C23RikQ9DAX4 101 aa9.44□□□□□ -0.9
Traf6-201ENSMUST00000004949 1700011M02RikB1AX35 88 aa9.44□□□□□ -0.9
Traf6-201ENSMUST00000004949 A830031A19RikQ8BNT5 113 aa9.44□□□□□ -0.9
Traf6-201ENSMUST00000004949 Wfdc10Q3V2J9 124 aa9.44□□□□□ -0.9
Traf6-201ENSMUST00000004949 Cox8cA6H666 72 aa9.44□□□□□ -0.9
Traf6-201ENSMUST00000004949 Defb40Q70KL2 73 aa9.43□□□□□ -0.9
Traf6-201ENSMUST00000004949 Gm12353A2AGJ4 60 aa9.43□□□□□ -0.9
Traf6-201ENSMUST00000004949 Igkv1-117A0A140T8M0 119 aa9.43□□□□□ -0.9
Traf6-201ENSMUST00000004949 Q9DAB9 146 aa9.42□□□□□ -0.9
Traf6-201ENSMUST00000004949 CnfnQ6PCW6 111 aa9.42□□□□□ -0.9
Traf6-201ENSMUST00000004949 Ighv10-3A0A075B5T6 119 aa9.42□□□□□ -0.9
Traf6-201ENSMUST00000004949 Igkv8-21A0A140T8P7 120 aa9.42□□□□□ -0.9
Traf6-201ENSMUST00000004949 SrarpQ3ULG3 163 aa9.42□□□□□ -0.9
Traf6-201ENSMUST00000004949 A830005F24RikQ8BRT5 167 aa9.42□□□□□ -0.9
Traf6-201ENSMUST00000004949 PtprqP0C5E4 2300 aa9.4□□□□□ -0.9
Traf6-201ENSMUST00000004949 Cox7bP56393 80 aa9.4□□□□□ -0.9
Traf6-201ENSMUST00000004949 Ccdc179J3QM76 67 aa9.4□□□□□ -0.9
Traf6-201ENSMUST00000004949 Spink4O35679 86 aa9.4□□□□□ -0.9
Traf6-201ENSMUST00000004949 Defb13Q8R2I4 64 aa9.4□□□□□ -0.9
Traf6-201ENSMUST00000004949 HttP42859 3119 aa9.4□□□□□ -0.91
Traf6-201ENSMUST00000004949 Ube2d4D3YUH6 135 aa9.4□□□□□ -0.91
Traf6-201ENSMUST00000004949 Gm16485Q8C4B7 115 aa9.4□□□□□ -0.91
Traf6-201ENSMUST00000004949 Naa38Q9D2U5 125 aa9.4□□□□□ -0.91
Traf6-201ENSMUST00000004949 Igkv1-110A0A0B4J1I0 119 aa9.39□□□□□ -0.91
Traf6-201ENSMUST00000004949 Krtap27-1E9PX37 202 aa9.39□□□□□ -0.91
Traf6-201ENSMUST00000004949 Prr15lQ8JZM2 100 aa9.39□□□□□ -0.91
Traf6-201ENSMUST00000004949 Vpreb3D3Z6J4 130 aa9.39□□□□□ -0.91
Traf6-201ENSMUST00000004949 Krtap24-1G3X9A2 248 aa9.39□□□□□ -0.91
Traf6-201ENSMUST00000004949 PolqQ8CGS6 2544 aa9.39□□□□□ -0.91
Traf6-201ENSMUST00000004949 Gm10322F7D7I4 111 aa9.39□□□□□ -0.91
Traf6-201ENSMUST00000004949 BtcQ05928 177 aa9.39□□□□□ -0.91
Traf6-201ENSMUST00000004949 FlnbQ80X90 2602 aaKnown RBP9.38□□□□□ -0.91
Traf6-201ENSMUST00000004949 CicQ924A2 2510 aa9.38□□□□□ -0.91
Traf6-201ENSMUST00000004949 Tcl1b5P56845 121 aa9.38□□□□□ -0.91
Traf6-201ENSMUST00000004949 Timm17bQ9Z0V7 172 aa9.38□□□□□ -0.91
Traf6-201ENSMUST00000004949 Ighv8-11A0A075B5X4 119 aa9.37□□□□□ -0.91
Traf6-201ENSMUST00000004949 Ighv10-1A0A0B4J1J6 119 aa9.37□□□□□ -0.91
Traf6-201ENSMUST00000004949 Smim1P0C8K7 78 aa9.37□□□□□ -0.91
Traf6-201ENSMUST00000004949 GhrhP16043 103 aa9.37□□□□□ -0.91
Traf6-201ENSMUST00000004949 Gm11011D3Z3L9 86 aa9.36□□□□□ -0.91
Traf6-201ENSMUST00000004949 Ighv2-9A0A075B5Q5 116 aa9.36□□□□□ -0.91
Traf6-201ENSMUST00000004949 Ighv8-13A0A075B5Y0 101 aa9.36□□□□□ -0.91
Traf6-201ENSMUST00000004949 Igf1P05017 153 aa9.35□□□□□ -0.91
Traf6-201ENSMUST00000004949 Tcl1b3P56842 122 aa9.35□□□□□ -0.91
Traf6-201ENSMUST00000004949 Tmem254aP0DN89 123 aa9.35□□□□□ -0.91
Traf6-201ENSMUST00000004949 Tmem254bP0DN90 123 aa9.35□□□□□ -0.91
Traf6-201ENSMUST00000004949 Tmem254cP0DN91 123 aa9.35□□□□□ -0.91
Traf6-201ENSMUST00000004949 Adm2Q7TNK8 150 aa9.35□□□□□ -0.91
Traf6-201ENSMUST00000004949 Wfdc3Q14AE4 130 aa9.34□□□□□ -0.91
Traf6-201ENSMUST00000004949 P06320 134 aa9.34□□□□□ -0.91
Traf6-201ENSMUST00000004949 Gm28374F6SG70 93 aa9.34□□□□□ -0.91
Traf6-201ENSMUST00000004949 Znf580Q9DB38 172 aa9.34□□□□□ -0.91
Traf6-201ENSMUST00000004949 Cdh23Q99PF4 3354 aa9.34□□□□□ -0.91
Traf6-201ENSMUST00000004949 Gm3233E9Q2H5 230 aa9.33□□□□□ -0.92
Traf6-201ENSMUST00000004949 Spink8Q09TK9 105 aa9.33□□□□□ -0.92
Traf6-201ENSMUST00000004949 EnhoQ8K1D8 76 aa9.33□□□□□ -0.92
Traf6-201ENSMUST00000004949 Gm1968Q3T9I3 115 aa9.33□□□□□ -0.92
Traf6-201ENSMUST00000004949 Ighv2-9-1A0A075B697 116 aa9.32□□□□□ -0.92
Traf6-201ENSMUST00000004949 Rpl28P41105 137 aaKnown RBP9.32□□□□□ -0.92
Traf6-201ENSMUST00000004949 CdsnQ7TPC1 561 aa9.32□□□□□ -0.92
Traf6-201ENSMUST00000004949 Pde6gP09174 87 aa9.32□□□□□ -0.92
Traf6-201ENSMUST00000004949 Brk1Q91VR8 75 aa9.31□□□□□ -0.92
Traf6-201ENSMUST00000004949 Trav14-1A0A0G2JF94 121 aa9.31□□□□□ -0.92
Traf6-201ENSMUST00000004949 Rev3lQ61493 3122 aa9.3□□□□□ -0.92
Traf6-201ENSMUST00000004949 TeppQ6IMH0 216 aa9.3□□□□□ -0.92
Traf6-201ENSMUST00000004949 Klk9Q32M27 251 aa9.29□□□□□ -0.92
Traf6-201ENSMUST00000004949 Rnf152Q8BG47 203 aa9.29□□□□□ -0.92
Traf6-201ENSMUST00000004949 Gm10577Q3UDV9 132 aa9.29□□□□□ -0.92
Traf6-201ENSMUST00000004949 4930556J24RikQ9D4U7 146 aa9.29□□□□□ -0.92
Traf6-201ENSMUST00000004949 4930432M17RikQ3V0W9 174 aa9.28□□□□□ -0.92
Traf6-201ENSMUST00000004949 Ankrd17Q99NH0 2603 aaKnown RBP9.28□□□□□ -0.92
Traf6-201ENSMUST00000004949 BaalcQ8VHV1 145 aa9.27□□□□□ -0.92
Traf6-201ENSMUST00000004949 Igkv3-12A0A140T8P0 119 aa9.27□□□□□ -0.92
Traf6-201ENSMUST00000004949 Odf3l2Q3TZ65 277 aa9.27□□□□□ -0.93
Traf6-201ENSMUST00000004949 Hcfc1Q61191 2045 aaKnown RBP9.27□□□□□ -0.93
Traf6-201ENSMUST00000004949 Defb11Q8R2I7 77 aa9.27□□□□□ -0.93
Traf6-201ENSMUST00000004949 Usp9yF8VPU6 2556 aa9.26□□□□□ -0.93
Traf6-201ENSMUST00000004949 Mrpl55Q9CZ83 127 aa9.26□□□□□ -0.93
Traf6-201ENSMUST00000004949 Wdr38Q9D994 303 aa9.25□□□□□ -0.93
Traf6-201ENSMUST00000004949 Q8K1L6 76 aa9.24□□□□□ -0.93
Traf6-201ENSMUST00000004949 Igkv8-30A0A140T8M3 121 aa9.24□□□□□ -0.93
Traf6-201ENSMUST00000004949 Gm5142Q8C5X9 133 aa9.24□□□□□ -0.93
Traf6-201ENSMUST00000004949 Bod1lE9Q6J5 3032 aa9.24□□□□□ -0.93
Traf6-201ENSMUST00000004949 Chd7A2AJK6 2986 aaKnown RBP9.24□□□□□ -0.93
Traf6-201ENSMUST00000004949 2310009B15RikA0A0A6YWI4 143 aa9.23□□□□□ -0.93
Traf6-201ENSMUST00000004949 Gm17509Q9CZ61 145 aa9.23□□□□□ -0.93
Traf6-201ENSMUST00000004949 Ankrd11E9Q4F7 2643 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms