RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 RetnlbQ99P86 105 aa13.61□□□□□ -0.23
Sort1-203ENSMUST00000135636 Jmjd1cQ69ZK6 2350 aa13.61□□□□□ -0.23
Sort1-203ENSMUST00000135636 SonQ9QX47 2444 aaKnown RBP13.6□□□□□ -0.23
Sort1-203ENSMUST00000135636 Gm17359A0A0G2JEB7 487 aa13.6□□□□□ -0.23
Sort1-203ENSMUST00000135636 1810062G17RikG3X8Y2 129 aa13.6□□□□□ -0.23
Sort1-203ENSMUST00000135636 Gm44965A0A0N4SVR3 59 aa13.6□□□□□ -0.23
Sort1-203ENSMUST00000135636 Iglc1A0A0G2JE99 106 aa13.59□□□□□ -0.23
Sort1-203ENSMUST00000135636 P01843 105 aa13.59□□□□□ -0.23
Sort1-203ENSMUST00000135636 1700010B08RikQ9DAI7 102 aa13.59□□□□□ -0.23
Sort1-203ENSMUST00000135636 Tnfrsf23Q9ER63 176 aa13.59□□□□□ -0.23
Sort1-203ENSMUST00000135636 Gm11011D3Z3L9 86 aa13.59□□□□□ -0.23
Sort1-203ENSMUST00000135636 Ighv1-61P01749 117 aa13.59□□□□□ -0.23
Sort1-203ENSMUST00000135636 Rpl28P41105 137 aaKnown RBP13.59□□□□□ -0.23
Sort1-203ENSMUST00000135636 Znf706Q9D115 76 aaKnown RBP13.58□□□□□ -0.24
Sort1-203ENSMUST00000135636 Rbx1P62878 108 aa13.58□□□□□ -0.24
Sort1-203ENSMUST00000135636 P84750 121 aa13.58□□□□□ -0.24
Sort1-203ENSMUST00000135636 Trbv13-2A0A140T8N6 113 aa13.57□□□□□ -0.24
Sort1-203ENSMUST00000135636 P06320 134 aa13.57□□□□□ -0.24
Sort1-203ENSMUST00000135636 H2al1mQ9DAD9 105 aa13.57□□□□□ -0.24
Sort1-203ENSMUST00000135636 Defb42Q8BVB5 75 aa13.57□□□□□ -0.24
Sort1-203ENSMUST00000135636 Klk9Q32M27 251 aa13.56□□□□□ -0.24
Sort1-203ENSMUST00000135636 Pcnx2Q5DU28 2122 aa13.56□□□□□ -0.24
Sort1-203ENSMUST00000135636 H2al1aQ5M8Q2 105 aa13.56□□□□□ -0.24
Sort1-203ENSMUST00000135636 H2al1eQ810S6 105 aa13.56□□□□□ -0.24
Sort1-203ENSMUST00000135636 NpyP57774 97 aa13.56□□□□□ -0.24
Sort1-203ENSMUST00000135636 Trav4d-3A0A075B625 110 aa13.55□□□□□ -0.24
Sort1-203ENSMUST00000135636 Prrc2aQ7TSC1 2158 aaKnown RBP13.55□□□□□ -0.24
Sort1-203ENSMUST00000135636 7420426K07RikQ3UX66 186 aa13.55□□□□□ -0.24
Sort1-203ENSMUST00000135636 Gm12689Q8BQU9 117 aa13.55□□□□□ -0.24
Sort1-203ENSMUST00000135636 Mrpl52Q9D0Y8 121 aa13.54□□□□□ -0.24
Sort1-203ENSMUST00000135636 TshbP12656 138 aa13.53□□□□□ -0.24
Sort1-203ENSMUST00000135636 P18527 97 aa13.53□□□□□ -0.24
Sort1-203ENSMUST00000135636 C2cd3Q52KB6 2323 aa13.53□□□□□ -0.24
Sort1-203ENSMUST00000135636 AtrxQ61687 2476 aaKnown RBP13.53□□□□□ -0.24
Sort1-203ENSMUST00000135636 PtprsB0V2N1 1907 aa13.53□□□□□ -0.24
Sort1-203ENSMUST00000135636 Kiaa1549Q68FD9 1940 aa13.53□□□□□ -0.24
Sort1-203ENSMUST00000135636 Rnf152Q8BG47 203 aa13.53□□□□□ -0.24
Sort1-203ENSMUST00000135636 Odf3Q920N1 254 aa13.53□□□□□ -0.24
Sort1-203ENSMUST00000135636 Crip2Q9DCT8 208 aaKnown RBP13.53□□□□□ -0.24
Sort1-203ENSMUST00000135636 Ighv1-75A0A075B5Y2 117 aa13.52□□□□□ -0.24
Sort1-203ENSMUST00000135636 Trav12d-3A0A075B6A4 115 aa13.52□□□□□ -0.25
Sort1-203ENSMUST00000135636 FcorP0DJI6 106 aa13.52□□□□□ -0.25
Sort1-203ENSMUST00000135636 TeppQ6IMH0 216 aa13.52□□□□□ -0.25
Sort1-203ENSMUST00000135636 H2al1bA0A087WP11 105 aa13.52□□□□□ -0.25
Sort1-203ENSMUST00000135636 Gm10490F6VBM2 120 aa13.52□□□□□ -0.25
Sort1-203ENSMUST00000135636 Cox8cA6H666 72 aa13.51□□□□□ -0.25
Sort1-203ENSMUST00000135636 BaalcQ8VHV1 145 aa13.51□□□□□ -0.25
Sort1-203ENSMUST00000135636 Tns1E9Q0S6 1888 aaKnown RBP13.51□□□□□ -0.25
Sort1-203ENSMUST00000135636 Igkv8-19A0A0G2JFN8 121 aa13.51□□□□□ -0.25
Sort1-203ENSMUST00000135636 Ndufs5Q99LY9 106 aa13.51□□□□□ -0.25
Sort1-203ENSMUST00000135636 Gm10267M0QWD8 85 aa13.5□□□□□ -0.25
Sort1-203ENSMUST00000135636 Gm16485Q8C4B7 115 aa13.5□□□□□ -0.25
Sort1-203ENSMUST00000135636 Mlst8Q9DCJ1 326 aa13.5□□□□□ -0.25
Sort1-203ENSMUST00000135636 Sec16aA2AIX1 2377 aa13.5□□□□□ -0.25
Sort1-203ENSMUST00000135636 Gm5878E9PUB3 99 aa13.5□□□□□ -0.25
Sort1-203ENSMUST00000135636 Ormdl1Q921I0 153 aa13.5□□□□□ -0.25
Sort1-203ENSMUST00000135636 Psmb11Q8BG41 302 aa13.49□□□□□ -0.25
Sort1-203ENSMUST00000135636 Obox8V9GWY9 217 aa13.49□□□□□ -0.25
Sort1-203ENSMUST00000135636 Snai3Q9QY31 287 aa13.49□□□□□ -0.25
Sort1-203ENSMUST00000135636 Cd164l2Q9D6W7 172 aa13.48□□□□□ -0.25
Sort1-203ENSMUST00000135636 Triap1Q9D8Z2 76 aa13.48□□□□□ -0.25
Sort1-203ENSMUST00000135636 Ndufa4l2Q4FZG9 87 aa13.48□□□□□ -0.25
Sort1-203ENSMUST00000135636 Vpreb2P13373 142 aa13.47□□□□□ -0.25
Sort1-203ENSMUST00000135636 Gm10300Q8C8P7 189 aa13.46□□□□□ -0.25
Sort1-203ENSMUST00000135636 Ndufb1P0DN34 57 aa13.45□□□□□ -0.26
Sort1-203ENSMUST00000135636 EnhoQ8K1D8 76 aa13.45□□□□□ -0.26
Sort1-203ENSMUST00000135636 Sorl1O88307 2215 aaKnown RBP13.45□□□□□ -0.26
Sort1-203ENSMUST00000135636 Ighv8-5A0A0A6YY60 119 aa13.44□□□□□ -0.26
Sort1-203ENSMUST00000135636 Gm16223Q8CBM3 117 aa13.44□□□□□ -0.26
Sort1-203ENSMUST00000135636 Igf1P05017 153 aa13.43□□□□□ -0.26
Sort1-203ENSMUST00000135636 Cspg4Q8VHY0 2327 aa13.43□□□□□ -0.26
Sort1-203ENSMUST00000135636 Q8K1L6 76 aa13.43□□□□□ -0.26
Sort1-203ENSMUST00000135636 Ighv2-6A0A075B6A7 116 aa13.43□□□□□ -0.26
Sort1-203ENSMUST00000135636 Lypd6Q8BPP5 171 aa13.43□□□□□ -0.26
Sort1-203ENSMUST00000135636 Psmb8P28063 276 aa13.42□□□□□ -0.26
Sort1-203ENSMUST00000135636 Eif4ebp1Q60876 117 aa13.42□□□□□ -0.26
Sort1-203ENSMUST00000135636 A930009A15RikG3UYI6 118 aa13.42□□□□□ -0.26
Sort1-203ENSMUST00000135636 Ighv1-56A0A0A6YXG2 117 aa13.41□□□□□ -0.26
Sort1-203ENSMUST00000135636 Gm5629P06327 117 aa13.41□□□□□ -0.26
Sort1-203ENSMUST00000135636 P01659 112 aa13.41□□□□□ -0.26
Sort1-203ENSMUST00000135636 Smim20D3Z7Q2 69 aa13.4□□□□□ -0.26
Sort1-203ENSMUST00000135636 Gm21060J3KMU4 56 aa13.4□□□□□ -0.26
Sort1-203ENSMUST00000135636 Arid1bE9Q4N7 2244 aa13.4□□□□□ -0.26
Sort1-203ENSMUST00000135636 Ube2d4D3YUH6 135 aa13.4□□□□□ -0.26
Sort1-203ENSMUST00000135636 Spg11Q3UHA3 2430 aa13.4□□□□□ -0.27
Sort1-203ENSMUST00000135636 Gm9922Q8C3P1 144 aa13.39□□□□□ -0.27
Sort1-203ENSMUST00000135636 C130032M10RikQ8C888 123 aa13.39□□□□□ -0.27
Sort1-203ENSMUST00000135636 TroQ6DIC6 2087 aa13.38□□□□□ -0.27
Sort1-203ENSMUST00000135636 Pcp4P63054 62 aa13.37□□□□□ -0.27
Sort1-203ENSMUST00000135636 4930564D02RikQ9D4S4 103 aa13.36□□□□□ -0.27
Sort1-203ENSMUST00000135636 Ighv2-9A0A075B5Q5 116 aa13.35□□□□□ -0.27
Sort1-203ENSMUST00000135636 Dopey1Q8BL99 2399 aa13.35□□□□□ -0.27
Sort1-203ENSMUST00000135636 Gm3443F7CCV5 94 aa13.35□□□□□ -0.27
Sort1-203ENSMUST00000135636 1700056E22RikF7CNM6 234 aa13.34□□□□□ -0.27
Sort1-203ENSMUST00000135636 OtoglF7A4A7 2325 aa13.34□□□□□ -0.27
Sort1-203ENSMUST00000135636 Chchd7Q8K2Q5 85 aa13.33□□□□□ -0.28
Sort1-203ENSMUST00000135636 Rnf185Q91YT2 192 aa13.33□□□□□ -0.28
Sort1-203ENSMUST00000135636 Ighv1-66A0A075B5X5 117 aa13.32□□□□□ -0.28
Sort1-203ENSMUST00000135636 Serp1Q9Z1W5 66 aa13.31□□□□□ -0.28
Sort1-203ENSMUST00000135636 Col5a1O88207 1838 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 103.2 ms