RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Cox6a1P43024 111 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 ClcP97400 68 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 Sdhaf1Q3U276 118 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 Trav6d-4Q5R1I0 115 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 Notch2O35516 2470 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 Trdv1A0A075B657 112 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 Trav6d-3A0A075B6B3 112 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 Gm9887F6RFI0 207 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 Pate4Q09098 99 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 Trav6-3Q5R1E6 112 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 Ifitm10Q8BR26 201 aa4.72□□□□□ -1.65
Ccdc38-203ENSMUST00000132214 Ighv1-62-1A0A075B5U3 116 aa4.71□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ighv1-36A0A0A6YXT2 117 aa4.71□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ighv2-5A0A0A6YY69 116 aa4.71□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Igkv14-130A0A0G2JF45 117 aa4.71□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Gm7102J3QQ10 178 aa4.71□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Gm12888Q3UW77 119 aa4.71□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Gm10118Q8C8J5 116 aa4.71□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Immp1lQ9CQU8 166 aa4.71□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Adgrg4B7ZCC9 3073 aa4.71□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Cmya5Q70KF4 3739 aa4.71□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 P01757 117 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 P84751 237 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 SrarpQ3ULG3 163 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Fxyd3Q61835 88 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 B230307C23RikQ8BLB2 64 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Gm9958Q8C9U4 106 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Rnf185Q91YT2 192 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 RhohQ9D3G9 191 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Snai3Q9QY31 287 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Abca2P41234 2434 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ighv1-31A0A0A6YWK5 117 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Igkv4-54A0A0G2JES9 117 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Lyz1P17897 148 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 P18525 117 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Phf5aP83870 110 aaKnown RBP4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Med13lQ6JPI3 2207 aa4.7□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Igkv3-10A0A0G2JGN0 119 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Defa27F2Z403 93 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Prelid3aQ8VE85 172 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Mrpl36Q99N90 102 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Znf22Q9ERU3 237 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Timm17aQ9Z0V8 171 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Tln2Q71LX4 2375 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Igkv1-132A0A0B4J1H9 120 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 P01787 123 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Acyp1P56376 99 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ube2bP63147 152 aa4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Fhl1P97447 280 aaKnown RBP4.69□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ankrd17Q99NH0 2603 aaKnown RBP4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Armcx4E9PWM3 2356 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Csmd2V9GX34 3611 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Fam229aB2KGE5 128 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Gm42674D3YUT9 64 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Spink8Q09TK9 105 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Gm10837Q3UTT8 145 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Q4KKZ1 196 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Cystm1Q8K353 104 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 HampQ9EQ21 83 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Chd9Q8BYH8 2885 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ighv5-9A0A075B5Q2 117 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ighv1-50A0A075B5W1 117 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 C920008G01RikA0A0B4J1N1 112 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Igkv1-131A0A140T8M8 120 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Gm7075D3Z497 112 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Sh2d1aO88890 126 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 P01806 116 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 BlcapP62951 87 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Utp20Q5XG71 2788 aaKnown RBP4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 2310057N15RikQ9D6T8 200 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Dnal4Q9DCM4 105 aa4.68□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 AtrQ9JKK8 2635 aa4.67□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 P01788 123 aa4.67□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 AW146154Q3TPQ7 468 aa4.67□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ubald1Q6P3B2 176 aa4.67□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Lyg1Q9D7Q0 197 aa4.67□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Rpl28P41105 137 aaKnown RBP4.66□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Foxi2Q3I5G5 311 aa4.66□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Cdc42se1Q8BHL7 80 aa4.66□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 KncnQ307W7 124 aa4.66□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Znrd1Q791N7 123 aa4.66□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 AI606181Q8C7B9 129 aa4.66□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Q9D131 166 aa4.66□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ccl28Q9JIL2 130 aa4.66□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ighv1-23A0A0A6YVW3 117 aa4.65□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Gm17521F6QAC8 156 aa4.65□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Rpl27aP14115 148 aaKnown RBP4.65□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Cd99Q8VCN6 175 aa4.65□□□□□ -1.66
Ccdc38-203ENSMUST00000132214 Ighv1-81A0A075B5Y4 117 aa4.65□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 Ighv1-49A0A0A6YWX2 117 aa4.65□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 AngP21570 145 aa4.65□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 SpinklQ8CEK3 90 aa4.65□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 Tmem167aQ9CR64 72 aa4.65□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 Igsf10Q3V1M1 2594 aa4.64□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 Nav2E9Q842 2432 aa4.64□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 Igkv20-101-2A0A0G2JDU3 113 aa4.64□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 BikO70337 150 aa4.64□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 P0C1Z5 52 aa4.64□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 Svs5P30933 122 aa4.64□□□□□ -1.67
Ccdc38-203ENSMUST00000132214 Lypd1Q8BLC3 141 aa4.64□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 64.5 ms