RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Tal2Q62282 108 aa9.77□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Zfhx4Q9JJN2 3550 aa9.76□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Gm3233E9Q2H5 230 aa9.76□□□□□ -0.85
Clcn3-204ENSMUST00000110301 B230217C12RikE9Q3Z1 139 aa9.76□□□□□ -0.85
Clcn3-204ENSMUST00000110301 LeprotO89013 131 aa9.76□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Mrpl55Q9CZ83 127 aa9.76□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Ighv1-63A0A075B5X2 117 aa9.76□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Trav13n-1A0A0G2JEU8 110 aa9.76□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Mrpl52Q9D0Y8 121 aa9.76□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Fxyd5P97808 178 aa9.76□□□□□ -0.85
Clcn3-204ENSMUST00000110301 CrygdP04342 174 aa9.75□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Trav13d-4A0A0G2JFX3 110 aa9.75□□□□□ -0.85
Clcn3-204ENSMUST00000110301 E130114P18RikF6S0S7 154 aa9.75□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Col6a5A6H584 2640 aa9.74□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Igkv3-2A0A075B5P0 119 aa9.74□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Polr2kQ63871 58 aa9.74□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Trav13-4-dv7A0A075B6C2 110 aa9.74□□□□□ -0.85
Clcn3-204ENSMUST00000110301 C920008G01RikA0A0B4J1N1 112 aa9.74□□□□□ -0.85
Clcn3-204ENSMUST00000110301 P0C913 63 aa9.74□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Fn1P11276 2477 aaKnown RBP9.74□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Ighv1-11A0A0A6YWI9 117 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Igkv8-16A0A0G2JDG9 121 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Ighv1-5A0A0A6YWG2 117 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Gm6793B2RXM2 351 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Ndufa1O35683 70 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 4930415O20RikQ8CDT5 131 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Chd9Q8BYH8 2885 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Trav3-4A0A075B654 114 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Gm44965A0A0N4SVR3 59 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 P01837 106 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 D130052B06RikQ3UW13 202 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Cdk2ap2Q9CPY4 127 aa9.73□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Igkv4-62A0A0G2JDW9 117 aa9.72□□□□□ -0.85
Clcn3-204ENSMUST00000110301 CnfnQ6PCW6 111 aa9.72□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Spry2Q9QXV8 315 aa9.72□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Klk11Q9QYN3 276 aa9.72□□□□□ -0.85
Clcn3-204ENSMUST00000110301 P01729 129 aa9.72□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Trav4n-4A0A075B615 110 aa9.71□□□□□ -0.85
Clcn3-204ENSMUST00000110301 MalO09198 153 aa9.71□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Ighv1-72P01751 139 aa9.71□□□□□ -0.85
Clcn3-204ENSMUST00000110301 Defa16P50714 93 aa9.71□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Pla2g1bQ9Z0Y2 146 aa9.71□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Dmbt1Q60997 2085 aa9.7□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Zc2hc1bQ9D534 172 aa9.7□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Hivep1Q03172 2688 aa9.7□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Ighv8-12A0A0G2JDE1 119 aa9.7□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Morn5Q9DAI9 170 aa9.7□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Q9DAQ5 155 aa9.7□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Gm1968Q3T9I3 115 aa9.69□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Tm2d2Q8R0I4 213 aa9.69□□□□□ -0.86
Clcn3-204ENSMUST00000110301 PpdpfQ9CR37 115 aa9.69□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Krtap24-1G3X9A2 248 aa9.69□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Fgfbp3Q1HCM0 245 aa9.69□□□□□ -0.86
Clcn3-204ENSMUST00000110301 BaalcQ8VHV1 145 aa9.68□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Gm10509O88255 85 aa9.68□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Reg3bP35230 175 aa9.68□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Crip3Q6Q6R3 243 aa9.68□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Reg3dQ9QUS9 175 aa9.68□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Trav7-6A0A075B640 112 aa9.67□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Zfp951A0A087WRH0 451 aa9.67□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Gm20726G3UX18 150 aa9.67□□□□□ -0.86
Clcn3-204ENSMUST00000110301 CrygeQ03740 174 aa9.67□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Gata1P17679 413 aa9.66□□□□□ -0.86
Clcn3-204ENSMUST00000110301 SpinklQ8CEK3 90 aa9.66□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Tcf24V9GWT9 166 aa9.66□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Igsf10Q3V1M1 2594 aa9.66□□□□□ -0.86
Clcn3-204ENSMUST00000110301 E130218I03RikA0A0U1RNU5 63 aa9.66□□□□□ -0.86
Clcn3-204ENSMUST00000110301 A830031A19RikQ8BNT5 113 aa9.66□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Triap1Q9D8Z2 76 aa9.66□□□□□ -0.86
Clcn3-204ENSMUST00000110301 B230359F08RikA0A0B4J1K3 109 aa9.66□□□□□ -0.86
Clcn3-204ENSMUST00000110301 AngP21570 145 aa9.66□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Defb10Q8R2I8 73 aa9.66□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Defb29Q8BGW9 78 aa9.65□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Gm4861Q8C5A4 106 aa9.65□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Nf1Q04690 2841 aa9.65□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Ndufa12Q7TMF3 145 aaKnown RBP9.65□□□□□ -0.86
Clcn3-204ENSMUST00000110301 Nbeal2Q6ZQA0 2742 aa9.65□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Trav13-2A0A075B649 110 aa9.65□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Fgf6P21658 208 aa9.65□□□□□ -0.87
Clcn3-204ENSMUST00000110301 4930442H23RikQ9D5G7 103 aa9.65□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Rpl32-psP17932 135 aa9.64□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Defb47Q30KN1 79 aa9.64□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Ighv1-59A0A0A6YXE0 117 aa9.64□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Iglc1A0A0G2JE99 106 aa9.63□□□□□ -0.87
Clcn3-204ENSMUST00000110301 D730001G18RikA0A087WQU7 115 aa9.63□□□□□ -0.87
Clcn3-204ENSMUST00000110301 P01843 105 aa9.63□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Lgals4Q8K419 326 aa9.63□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Igkv4-78A0A0A6YYE5 119 aa9.63□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Glrp1E9Q9S8 174 aa9.63□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Chchd7Q8K2Q5 85 aa9.63□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Psmb11Q8BG41 302 aa9.62□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Gm26602M0QWA4 95 aa9.62□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Ndufa3Q9CQ91 84 aa9.62□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Gm9936Q8C864 160 aa9.62□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Ccl25O35903 144 aa9.61□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Celsr2Q9R0M0 2920 aa9.61□□□□□ -0.87
Clcn3-204ENSMUST00000110301 SpenQ62504 3644 aaKnown RBP9.61□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Trav13-1A0A075B644 110 aa9.61□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Gm10767Q3TQP0 103 aa9.6□□□□□ -0.87
Clcn3-204ENSMUST00000110301 Gm10295Q8CCF3 114 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms