RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 PrlhG3UWC3 86 aa11.29□□□□□ -0.6
Chd3-201ENSMUST00000092971 Tmem131O70472 1877 aa11.28□□□□□ -0.6
Chd3-201ENSMUST00000092971 Ube2d1P61080 147 aaKnown RBP11.28□□□□□ -0.6
Chd3-201ENSMUST00000092971 Dkk4Q8VEJ3 221 aa11.28□□□□□ -0.6
Chd3-201ENSMUST00000092971 Gm21060J3KMU4 56 aa11.27□□□□□ -0.61
Chd3-201ENSMUST00000092971 PlaurP35456 327 aa11.27□□□□□ -0.61
Chd3-201ENSMUST00000092971 Sox16Q62247 57 aa11.26□□□□□ -0.61
Chd3-201ENSMUST00000092971 Sprr3O09116 238 aa11.26□□□□□ -0.61
Chd3-201ENSMUST00000092971 Ube2d3P61079 147 aa11.26□□□□□ -0.61
Chd3-201ENSMUST00000092971 E130114P18RikF6S0S7 154 aa11.26□□□□□ -0.61
Chd3-201ENSMUST00000092971 Ighv2-3A0A075B696 115 aa11.25□□□□□ -0.61
Chd3-201ENSMUST00000092971 P01674 108 aa11.25□□□□□ -0.61
Chd3-201ENSMUST00000092971 P01823 113 aa11.25□□□□□ -0.61
Chd3-201ENSMUST00000092971 SycnQ8VCK7 134 aa11.25□□□□□ -0.61
Chd3-201ENSMUST00000092971 E030018B13RikJ3QMS9 113 aa11.25□□□□□ -0.61
Chd3-201ENSMUST00000092971 CdsnQ7TPC1 561 aa11.25□□□□□ -0.61
Chd3-201ENSMUST00000092971 AcacbE9Q4Z2 2448 aa11.25□□□□□ -0.61
Chd3-201ENSMUST00000092971 Trbv13-2A0A140T8N6 113 aa11.25□□□□□ -0.61
Chd3-201ENSMUST00000092971 Arhgap21Q6DFV3 1944 aa11.24□□□□□ -0.61
Chd3-201ENSMUST00000092971 Fer1l4A3KGK3 1992 aa11.24□□□□□ -0.61
Chd3-201ENSMUST00000092971 Nsun4C4P6S0 806 aaKnown RBP11.24□□□□□ -0.61
Chd3-201ENSMUST00000092971 Nav3Q80TN7 2359 aa11.24□□□□□ -0.61
Chd3-201ENSMUST00000092971 Gm16223Q8CBM3 117 aa11.24□□□□□ -0.61
Chd3-201ENSMUST00000092971 A0A286YE49 62 aa11.23□□□□□ -0.61
Chd3-201ENSMUST00000092971 LhbO09108 141 aa11.23□□□□□ -0.61
Chd3-201ENSMUST00000092971 Odf3Q920N1 254 aa11.23□□□□□ -0.61
Chd3-201ENSMUST00000092971 P01728 117 aa11.23□□□□□ -0.61
Chd3-201ENSMUST00000092971 TshbP12656 138 aa11.23□□□□□ -0.61
Chd3-201ENSMUST00000092971 Ramp1Q9WTJ5 148 aa11.23□□□□□ -0.61
Chd3-201ENSMUST00000092971 Gm11011D3Z3L9 86 aa11.23□□□□□ -0.61
Chd3-201ENSMUST00000092971 Gm5878E9PUB3 99 aa11.22□□□□□ -0.61
Chd3-201ENSMUST00000092971 Tmem213Q08EA8 116 aa11.22□□□□□ -0.61
Chd3-201ENSMUST00000092971 Wfdc17Q5SSJ1 76 aa11.22□□□□□ -0.61
Chd3-201ENSMUST00000092971 HelzQ6DFV5 1964 aaKnown RBP11.22□□□□□ -0.61
Chd3-201ENSMUST00000092971 Ighv1-5A0A0A6YWG2 117 aa11.22□□□□□ -0.61
Chd3-201ENSMUST00000092971 Gm8439G3UWA7 96 aa11.22□□□□□ -0.61
Chd3-201ENSMUST00000092971 Serp2Q6TAW2 65 aa11.22□□□□□ -0.61
Chd3-201ENSMUST00000092971 Nup210lQ9D2F7 1881 aa11.22□□□□□ -0.61
Chd3-201ENSMUST00000092971 Ighv1-75A0A075B5Y2 117 aa11.21□□□□□ -0.61
Chd3-201ENSMUST00000092971 2310009B15RikA0A0A6YWI4 143 aa11.21□□□□□ -0.61
Chd3-201ENSMUST00000092971 SbsponQ3UPR9 264 aa11.21□□□□□ -0.61
Chd3-201ENSMUST00000092971 Apoc4Q61268 124 aa11.21□□□□□ -0.61
Chd3-201ENSMUST00000092971 Vwa8Q8CC88 1905 aa11.21□□□□□ -0.62
Chd3-201ENSMUST00000092971 Ighv2-6A0A075B6A7 116 aa11.21□□□□□ -0.62
Chd3-201ENSMUST00000092971 Gm21748Q3UE70 102 aa11.21□□□□□ -0.62
Chd3-201ENSMUST00000092971 Cspg4Q8VHY0 2327 aa11.21□□□□□ -0.62
Chd3-201ENSMUST00000092971 Rbx1P62878 108 aa11.2□□□□□ -0.62
Chd3-201ENSMUST00000092971 Rnf185Q91YT2 192 aa11.2□□□□□ -0.62
Chd3-201ENSMUST00000092971 Igkv8-28A0A0G2JE47 121 aa11.19□□□□□ -0.62
Chd3-201ENSMUST00000092971 Lmo4P61969 165 aa11.18□□□□□ -0.62
Chd3-201ENSMUST00000092971 Gpha2Q925Q5 128 aa11.18□□□□□ -0.62
Chd3-201ENSMUST00000092971 Rif1Q6PR54 2419 aaKnown RBP11.18□□□□□ -0.62
Chd3-201ENSMUST00000092971 Ube2d2P62838 147 aa11.18□□□□□ -0.62
Chd3-201ENSMUST00000092971 FshbQ60687 130 aa11.17□□□□□ -0.62
Chd3-201ENSMUST00000092971 Spry4Q9WTP2 300 aa11.17□□□□□ -0.62
Chd3-201ENSMUST00000092971 Eif4ebp1Q60876 117 aa11.17□□□□□ -0.62
Chd3-201ENSMUST00000092971 1600014C23RikQ9DAX4 101 aa11.17□□□□□ -0.62
Chd3-201ENSMUST00000092971 Lce6aD3YV94 81 aa11.16□□□□□ -0.62
Chd3-201ENSMUST00000092971 P01659 112 aa11.16□□□□□ -0.62
Chd3-201ENSMUST00000092971 Q9CX25 107 aa11.16□□□□□ -0.62
Chd3-201ENSMUST00000092971 Nav2E9Q842 2432 aa11.16□□□□□ -0.62
Chd3-201ENSMUST00000092971 Notch4P31695 1964 aa11.16□□□□□ -0.62
Chd3-201ENSMUST00000092971 AgrnA2ASQ1 1950 aa11.16□□□□□ -0.62
Chd3-201ENSMUST00000092971 P06329 120 aa11.15□□□□□ -0.62
Chd3-201ENSMUST00000092971 Znf239P24399 201 aa11.15□□□□□ -0.62
Chd3-201ENSMUST00000092971 Arhgap32Q811P8 2089 aa11.15□□□□□ -0.62
Chd3-201ENSMUST00000092971 Pkd1l2Q7TN88 2461 aa11.15□□□□□ -0.62
Chd3-201ENSMUST00000092971 Dennd4cA6H8H2 1906 aa11.15□□□□□ -0.62
Chd3-201ENSMUST00000092971 E130116L18RikQ8BMV6 101 aa11.15□□□□□ -0.63
Chd3-201ENSMUST00000092971 Smrp1Q2MH31 260 aa11.14□□□□□ -0.63
Chd3-201ENSMUST00000092971 Ighv1-59A0A0A6YXE0 117 aa11.14□□□□□ -0.63
Chd3-201ENSMUST00000092971 1700011M02RikB1AX35 88 aa11.14□□□□□ -0.63
Chd3-201ENSMUST00000092971 Gm5468Q8C3D3 155 aa11.14□□□□□ -0.63
Chd3-201ENSMUST00000092971 OtoglF7A4A7 2325 aa11.14□□□□□ -0.63
Chd3-201ENSMUST00000092971 Ighv1-61P01749 117 aa11.13□□□□□ -0.63
Chd3-201ENSMUST00000092971 Pip4p1Q3TWL2 284 aa11.13□□□□□ -0.63
Chd3-201ENSMUST00000092971 Zfyve26Q5DU37 2529 aa11.12□□□□□ -0.63
Chd3-201ENSMUST00000092971 Col5a3Q9JLI2 1739 aa11.12□□□□□ -0.63
Chd3-201ENSMUST00000092971 Cd27P41272 250 aa11.12□□□□□ -0.63
Chd3-201ENSMUST00000092971 A230072I06RikQ3UUJ8 172 aa11.12□□□□□ -0.63
Chd3-201ENSMUST00000092971 C130032M10RikQ8C888 123 aa11.12□□□□□ -0.63
Chd3-201ENSMUST00000092971 Anapc1P53995 1944 aaKnown RBP11.12□□□□□ -0.63
Chd3-201ENSMUST00000092971 Ly6gP35461 111 aa11.11□□□□□ -0.63
Chd3-201ENSMUST00000092971 Gm4707V9GXN5 68 aa11.11□□□□□ -0.63
Chd3-201ENSMUST00000092971 TeppQ6IMH0 216 aa11.1□□□□□ -0.63
Chd3-201ENSMUST00000092971 Ighv1-66A0A075B5X5 117 aa11.1□□□□□ -0.63
Chd3-201ENSMUST00000092971 Col4a5Q63ZW6 1691 aa11.1□□□□□ -0.63
Chd3-201ENSMUST00000092971 Adm2Q7TNK8 150 aa11.1□□□□□ -0.63
Chd3-201ENSMUST00000092971 Ifitm6A0A1B0GS75 124 aa11.09□□□□□ -0.63
Chd3-201ENSMUST00000092971 BC067074F6RXI4 2391 aa11.09□□□□□ -0.63
Chd3-201ENSMUST00000092971 Cox8cA6H666 72 aa11.09□□□□□ -0.63
Chd3-201ENSMUST00000092971 Gm10490F6VBM2 120 aa11.09□□□□□ -0.63
Chd3-201ENSMUST00000092971 Defb39Q70KL3 74 aa11.09□□□□□ -0.63
Chd3-201ENSMUST00000092971 Cyyr1Q8VIH7 165 aa11.07□□□□□ -0.64
Chd3-201ENSMUST00000092971 Ighv1-56A0A0A6YXG2 117 aa11.07□□□□□ -0.64
Chd3-201ENSMUST00000092971 Gm26566Q8CAC1 153 aa11.07□□□□□ -0.64
Chd3-201ENSMUST00000092971 CtrlQ9ER05 264 aa11.07□□□□□ -0.64
Chd3-201ENSMUST00000092971 TectaO08523 2155 aa11.07□□□□□ -0.64
Chd3-201ENSMUST00000092971 Gm9925F6T2U3 160 aa11.06□□□□□ -0.64
Chd3-201ENSMUST00000092971 Fhl2O70433 279 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms